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1.

rs1491307074 has merged into rs762346377 [Homo sapiens]
    Variant type:
    DELINS
    Alleles:
    TTTTTTTTTTT>-,TTT,TTTT,TTTTT,TTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
    Chromosome:
    1:211849056 (GRCh38)
    1:212022398 (GRCh37)
    Canonical SPDI:
    NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849045:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
    Gene:
    LPGAT1-AS1 (Varview)
    Functional Consequence:
    genic_downstream_transcript_variant,intron_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    TTTTTTTTTTTTT=0./0 (ALFA)
    HGVS:
    NC_000001.11:g.211849056_211849066del, NC_000001.11:g.211849059_211849066del, NC_000001.11:g.211849060_211849066del, NC_000001.11:g.211849061_211849066del, NC_000001.11:g.211849062_211849066del, NC_000001.11:g.211849064_211849066del, NC_000001.11:g.211849065_211849066del, NC_000001.11:g.211849066del, NC_000001.11:g.211849066dup, NC_000001.11:g.211849065_211849066dup, NC_000001.11:g.211849064_211849066dup, NC_000001.11:g.211849063_211849066dup, NC_000001.11:g.211849062_211849066dup, NC_000001.11:g.211849061_211849066dup, NC_000001.11:g.211849060_211849066dup, NC_000001.11:g.211849059_211849066dup, NC_000001.11:g.211849058_211849066dup, NC_000001.11:g.211849057_211849066dup, NC_000001.11:g.211849056_211849066dup, NC_000001.11:g.211849055_211849066dup, NC_000001.11:g.211849051_211849066dup, NC_000001.11:g.211849050_211849066dup, NC_000001.11:g.211849049_211849066dup, NC_000001.11:g.211849048_211849066dup, NC_000001.11:g.211849066_211849067insTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.212022398_212022408del, NC_000001.10:g.212022401_212022408del, NC_000001.10:g.212022402_212022408del, NC_000001.10:g.212022403_212022408del, NC_000001.10:g.212022404_212022408del, NC_000001.10:g.212022406_212022408del, NC_000001.10:g.212022407_212022408del, NC_000001.10:g.212022408del, NC_000001.10:g.212022408dup, NC_000001.10:g.212022407_212022408dup, NC_000001.10:g.212022406_212022408dup, NC_000001.10:g.212022405_212022408dup, NC_000001.10:g.212022404_212022408dup, NC_000001.10:g.212022403_212022408dup, NC_000001.10:g.212022402_212022408dup, NC_000001.10:g.212022401_212022408dup, NC_000001.10:g.212022400_212022408dup, NC_000001.10:g.212022399_212022408dup, NC_000001.10:g.212022398_212022408dup, NC_000001.10:g.212022397_212022408dup, NC_000001.10:g.212022393_212022408dup, NC_000001.10:g.212022392_212022408dup, NC_000001.10:g.212022391_212022408dup, NC_000001.10:g.212022390_212022408dup, NC_000001.10:g.212022408_212022409insTTTTTTTTTTTTTTTTTTTTTT
    2.

    rs1491299110 has merged into rs1159402832 [Homo sapiens]
      Variant type:
      DELINS
      Alleles:
      TTTTTTTTTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
      Chromosome:
      1:211835821 (GRCh38)
      1:212009163 (GRCh37)
      Canonical SPDI:
      NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211835807:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
      Gene:
      LPGAT1-AS1 (Varview)
      Functional Consequence:
      intron_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      TTTTTTTTTTTTT=0./0 (ALFA)
      -=0.01018/182 (TOMMO)
      HGVS:
      NC_000001.11:g.211835821_211835840del, NC_000001.11:g.211835822_211835840del, NC_000001.11:g.211835823_211835840del, NC_000001.11:g.211835824_211835840del, NC_000001.11:g.211835825_211835840del, NC_000001.11:g.211835826_211835840del, NC_000001.11:g.211835827_211835840del, NC_000001.11:g.211835828_211835840del, NC_000001.11:g.211835829_211835840del, NC_000001.11:g.211835830_211835840del, NC_000001.11:g.211835831_211835840del, NC_000001.11:g.211835832_211835840del, NC_000001.11:g.211835833_211835840del, NC_000001.11:g.211835834_211835840del, NC_000001.11:g.211835835_211835840del, NC_000001.11:g.211835836_211835840del, NC_000001.11:g.211835837_211835840del, NC_000001.11:g.211835838_211835840del, NC_000001.11:g.211835839_211835840del, NC_000001.11:g.211835840del, NC_000001.11:g.211835840dup, NC_000001.11:g.211835839_211835840dup, NC_000001.11:g.211835838_211835840dup, NC_000001.11:g.211835837_211835840dup, NC_000001.11:g.211835836_211835840dup, NC_000001.11:g.211835835_211835840dup, NC_000001.10:g.212009163_212009182del, NC_000001.10:g.212009164_212009182del, NC_000001.10:g.212009165_212009182del, NC_000001.10:g.212009166_212009182del, NC_000001.10:g.212009167_212009182del, NC_000001.10:g.212009168_212009182del, NC_000001.10:g.212009169_212009182del, NC_000001.10:g.212009170_212009182del, NC_000001.10:g.212009171_212009182del, NC_000001.10:g.212009172_212009182del, NC_000001.10:g.212009173_212009182del, NC_000001.10:g.212009174_212009182del, NC_000001.10:g.212009175_212009182del, NC_000001.10:g.212009176_212009182del, NC_000001.10:g.212009177_212009182del, NC_000001.10:g.212009178_212009182del, NC_000001.10:g.212009179_212009182del, NC_000001.10:g.212009180_212009182del, NC_000001.10:g.212009181_212009182del, NC_000001.10:g.212009182del, NC_000001.10:g.212009182dup, NC_000001.10:g.212009181_212009182dup, NC_000001.10:g.212009180_212009182dup, NC_000001.10:g.212009179_212009182dup, NC_000001.10:g.212009178_212009182dup, NC_000001.10:g.212009177_212009182dup
      3.

      rs1491290511 [Homo sapiens]
        Variant type:
        DEL
        Alleles:
        CT>- [Show Flanks]
        Chromosome:
        1:211829869 (GRCh38)
        1:212003211 (GRCh37)
        Canonical SPDI:
        NC_000001.11:211829868:CT:
        Gene:
        LPGAT1 (Varview), LPGAT1-AS1 (Varview)
        Functional Consequence:
        intron_variant,upstream_transcript_variant,5_prime_UTR_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        -=0./0 (ALFA)
        -=0.000018/2 (GnomAD)
        -=0.000023/6 (TOPMED)
        HGVS:
        4.

        rs1491247461 has merged into rs1216173180 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          TTTTTTTTTTTTT>-,TT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
          Chromosome:
          1:211849551 (GRCh38)
          1:212022893 (GRCh37)
          Canonical SPDI:
          NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:211849537:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
          Gene:
          LPGAT1-AS1 (Varview)
          Functional Consequence:
          intron_variant,genic_downstream_transcript_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          TTTTTTTTTTTTTTT=0./0 (ALFA)
          -=0.00233/4 (Korea1K)
          HGVS:
          NC_000001.11:g.211849551_211849563del, NC_000001.11:g.211849553_211849563del, NC_000001.11:g.211849555_211849563del, NC_000001.11:g.211849556_211849563del, NC_000001.11:g.211849557_211849563del, NC_000001.11:g.211849558_211849563del, NC_000001.11:g.211849559_211849563del, NC_000001.11:g.211849560_211849563del, NC_000001.11:g.211849561_211849563del, NC_000001.11:g.211849562_211849563del, NC_000001.11:g.211849563del, NC_000001.11:g.211849563dup, NC_000001.11:g.211849562_211849563dup, NC_000001.11:g.211849559_211849563dup, NC_000001.11:g.211849558_211849563dup, NC_000001.11:g.211849555_211849563dup, NC_000001.11:g.211849551_211849563dup, NC_000001.10:g.212022893_212022905del, NC_000001.10:g.212022895_212022905del, NC_000001.10:g.212022897_212022905del, NC_000001.10:g.212022898_212022905del, NC_000001.10:g.212022899_212022905del, NC_000001.10:g.212022900_212022905del, NC_000001.10:g.212022901_212022905del, NC_000001.10:g.212022902_212022905del, NC_000001.10:g.212022903_212022905del, NC_000001.10:g.212022904_212022905del, NC_000001.10:g.212022905del, NC_000001.10:g.212022905dup, NC_000001.10:g.212022904_212022905dup, NC_000001.10:g.212022901_212022905dup, NC_000001.10:g.212022900_212022905dup, NC_000001.10:g.212022897_212022905dup, NC_000001.10:g.212022893_212022905dup
          5.

          rs1491167978 [Homo sapiens]
            Variant type:
            INS
            Alleles:
            ->A,ATA,ATATA,ATATATA,ATATATACATATATATATATA,ATATATATA,ATATATATATA,ATATATATATATA,ATATATATATATATA,ATATATATATATATATA,ATATATATATATATATATA,ATATATATATATATATATATA,ATATATATATATATATATATATA,ATATATATATATATATATATATATA,ATATATATATATATATATATATATATA,ATATATATATATATATATATATATATATA,ATATATATATATATATG,ATATATATATATATC,ATATATATATATC,ATGTATATA [Show Flanks]
            Chromosome:
            1:211835808 (GRCh38)
            1:212009151 (GRCh37)
            Canonical SPDI:
            NC_000001.11:211835808::A,NC_000001.11:211835808::ATA,NC_000001.11:211835808::ATATA,NC_000001.11:211835808::ATATATA,NC_000001.11:211835808::ATATATACATATATATATATA,NC_000001.11:211835808::ATATATATA,NC_000001.11:211835808::ATATATATATA,NC_000001.11:211835808::ATATATATATATA,NC_000001.11:211835808::ATATATATATATATA,NC_000001.11:211835808::ATATATATATATATATA,NC_000001.11:211835808::ATATATATATATATATATA,NC_000001.11:211835808::ATATATATATATATATATATA,NC_000001.11:211835808::ATATATATATATATATATATATA,NC_000001.11:211835808::ATATATATATATATATATATATATA,NC_000001.11:211835808::ATATATATATATATATATATATATATA,NC_000001.11:211835808::ATATATATATATATATATATATATATATA,NC_000001.11:211835808::ATATATATATATATATG,NC_000001.11:211835808::ATATATATATATATC,NC_000001.11:211835808::ATATATATATATC,NC_000001.11:211835808::ATGTATATA
            Gene:
            LPGAT1-AS1 (Varview)
            Functional Consequence:
            intron_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            ATA=0./0 (ALFA)
            ATATATATATA=0.00787/2 (NorthernSweden)
            HGVS:
            NC_000001.11:g.211835808_211835809insA, NC_000001.11:g.211835808_211835809insATA, NC_000001.11:g.211835808_211835809insATATA, NC_000001.11:g.211835808_211835809insATATATA, NC_000001.11:g.211835808_211835809insATATATACATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATA, NC_000001.11:g.211835808_211835809insATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATATATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATATATATATATATATATA, NC_000001.11:g.211835808_211835809insATATATATATATATATG, NC_000001.11:g.211835808_211835809insATATATATATATATC, NC_000001.11:g.211835808_211835809insATATATATATATC, NC_000001.11:g.211835808_211835809insATGTATATA, NC_000001.10:g.212009150_212009151insA, NC_000001.10:g.212009150_212009151insATA, NC_000001.10:g.212009150_212009151insATATA, NC_000001.10:g.212009150_212009151insATATATA, NC_000001.10:g.212009150_212009151insATATATACATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATA, NC_000001.10:g.212009150_212009151insATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATATATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATATATATATATATATATA, NC_000001.10:g.212009150_212009151insATATATATATATATATG, NC_000001.10:g.212009150_212009151insATATATATATATATC, NC_000001.10:g.212009150_212009151insATATATATATATC, NC_000001.10:g.212009150_212009151insATGTATATA
            6.

            rs1491087384 [Homo sapiens]
              Variant type:
              INS
              Alleles:
              ->ATT,ATTTT,ATTTTT,T,TTTTT [Show Flanks]
              Chromosome:
              1:211849044 (GRCh38)
              1:212022387 (GRCh37)
              Canonical SPDI:
              NC_000001.11:211849044::ATT,NC_000001.11:211849044::ATTTT,NC_000001.11:211849044::ATTTTT,NC_000001.11:211849044::T,NC_000001.11:211849044::TTTTT
              Gene:
              LPGAT1-AS1 (Varview)
              Functional Consequence:
              intron_variant,genic_downstream_transcript_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              T=0./0 (ALFA)
              HGVS:
              7.

              rs1490996341 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                G>A [Show Flanks]
                Chromosome:
                1:211854142 (GRCh38)
                1:212027484 (GRCh37)
                Canonical SPDI:
                NC_000001.11:211854141:G:A
                Gene:
                LPGAT1-AS1 (Varview)
                Functional Consequence:
                500B_downstream_variant,downstream_transcript_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                A=0./0 (ALFA)
                A=0.000004/1 (TOPMED)
                A=0.000007/1 (GnomAD)
                HGVS:
                8.

                rs1490758823 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  T>G [Show Flanks]
                  Chromosome:
                  1:211836520 (GRCh38)
                  1:212009862 (GRCh37)
                  Canonical SPDI:
                  NC_000001.11:211836519:T:G
                  Gene:
                  LPGAT1-AS1 (Varview)
                  Functional Consequence:
                  intron_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  G=0./0 (ALFA)
                  G=0.000004/1 (TOPMED)
                  G=0.000007/1 (GnomAD)
                  HGVS:
                  9.

                  rs1490746987 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    T>A,C [Show Flanks]
                    Chromosome:
                    1:211835820 (GRCh38)
                    1:212009162 (GRCh37)
                    Canonical SPDI:
                    NC_000001.11:211835819:T:A,NC_000001.11:211835819:T:C
                    Gene:
                    LPGAT1-AS1 (Varview)
                    Functional Consequence:
                    intron_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    C=0./0 (ALFA)
                    A=0.00416/6 (Korea1K)
                    A=0.00707/105 (TOMMO)
                    HGVS:
                    10.

                    rs1490662512 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      T>G [Show Flanks]
                      Chromosome:
                      1:211845292 (GRCh38)
                      1:212018634 (GRCh37)
                      Canonical SPDI:
                      NC_000001.11:211845291:T:G
                      Gene:
                      LPGAT1-AS1 (Varview)
                      Functional Consequence:
                      intron_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      G=0./0 (ALFA)
                      G=0.000004/1 (TOPMED)
                      G=0.000012/1 (GnomAD)
                      HGVS:
                      11.

                      rs1490512155 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        A>G [Show Flanks]
                        Chromosome:
                        1:211853675 (GRCh38)
                        1:212027017 (GRCh37)
                        Canonical SPDI:
                        NC_000001.11:211853674:A:G
                        Gene:
                        LPGAT1-AS1 (Varview)
                        Functional Consequence:
                        non_coding_transcript_variant,genic_downstream_transcript_variant
                        Validated:
                        by frequency,by alfa
                        MAF:
                        G=0./0 (ALFA)
                        G=0.000004/1 (TOPMED)
                        HGVS:
                        12.

                        rs1490277726 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          T>A [Show Flanks]
                          Chromosome:
                          1:211844859 (GRCh38)
                          1:212018201 (GRCh37)
                          Canonical SPDI:
                          NC_000001.11:211844858:T:A
                          Gene:
                          LPGAT1-AS1 (Varview)
                          Functional Consequence:
                          intron_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          A=0./0 (ALFA)
                          A=0.01506/44 (KOREAN)
                          HGVS:
                          13.

                          rs1490272497 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            C>T [Show Flanks]
                            Chromosome:
                            1:211831592 (GRCh38)
                            1:212004934 (GRCh37)
                            Canonical SPDI:
                            NC_000001.11:211831591:C:T
                            Gene:
                            LPGAT1 (Varview), LPGAT1-AS1 (Varview)
                            Functional Consequence:
                            intron_variant,upstream_transcript_variant,2KB_upstream_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            T=0./0 (ALFA)
                            T=0.000015/4 (TOPMED)
                            T=0.000021/3 (GnomAD)
                            HGVS:
                            14.

                            rs1490257940 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              A>G [Show Flanks]
                              Chromosome:
                              1:211836735 (GRCh38)
                              1:212010077 (GRCh37)
                              Canonical SPDI:
                              NC_000001.11:211836734:A:G
                              Gene:
                              LPGAT1-AS1 (Varview)
                              Functional Consequence:
                              intron_variant
                              Validated:
                              by frequency,by alfa,by cluster
                              MAF:
                              G=0./0 (ALFA)
                              G=0.000007/1 (GnomAD)
                              G=0.000008/2 (TOPMED)
                              HGVS:
                              15.

                              rs1489814145 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                C>G [Show Flanks]
                                Chromosome:
                                1:211831070 (GRCh38)
                                1:212004412 (GRCh37)
                                Canonical SPDI:
                                NC_000001.11:211831069:C:G
                                Gene:
                                LPGAT1 (Varview), LPGAT1-AS1 (Varview)
                                Functional Consequence:
                                intron_variant,upstream_transcript_variant,2KB_upstream_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                G=0./0 (ALFA)
                                G=0.000007/1 (GnomAD)
                                G=0.000008/2 (TOPMED)
                                HGVS:
                                16.

                                rs1489731609 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  G>A,T [Show Flanks]
                                  Chromosome:
                                  1:211837894 (GRCh38)
                                  1:212011236 (GRCh37)
                                  Canonical SPDI:
                                  NC_000001.11:211837893:G:A,NC_000001.11:211837893:G:T
                                  Gene:
                                  LPGAT1-AS1 (Varview)
                                  Functional Consequence:
                                  intron_variant
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  T=0./0 (ALFA)
                                  T=0.000004/1 (TOPMED)
                                  HGVS:
                                  17.

                                  rs1489728023 [Homo sapiens]
                                    Variant type:
                                    DELINS
                                    Alleles:
                                    A>- [Show Flanks]
                                    Chromosome:
                                    1:211846800 (GRCh38)
                                    1:212020142 (GRCh37)
                                    Canonical SPDI:
                                    NC_000001.11:211846799:AA:A
                                    Gene:
                                    LPGAT1-AS1 (Varview)
                                    Functional Consequence:
                                    intron_variant,downstream_transcript_variant,genic_downstream_transcript_variant
                                    Validated:
                                    by frequency,by alfa,by cluster
                                    MAF:
                                    AA=0.000142/2 (ALFA)
                                    -=0.000026/7 (TOPMED)
                                    -=0.000029/4 (GnomAD)
                                    HGVS:
                                    18.

                                    rs1489565319 [Homo sapiens]
                                      Variant type:
                                      SNV
                                      Alleles:
                                      A>T [Show Flanks]
                                      Chromosome:
                                      1:211844641 (GRCh38)
                                      1:212017983 (GRCh37)
                                      Canonical SPDI:
                                      NC_000001.11:211844640:A:T
                                      Gene:
                                      LPGAT1-AS1 (Varview)
                                      Functional Consequence:
                                      intron_variant
                                      Validated:
                                      by frequency,by alfa,by cluster
                                      MAF:
                                      T=0./0 (ALFA)
                                      T=0.000014/2 (GnomAD)
                                      T=0.000034/9 (TOPMED)
                                      HGVS:
                                      19.

                                      rs1489542168 [Homo sapiens]
                                        Variant type:
                                        SNV
                                        Alleles:
                                        G>A [Show Flanks]
                                        Chromosome:
                                        1:211843874 (GRCh38)
                                        1:212017216 (GRCh37)
                                        Canonical SPDI:
                                        NC_000001.11:211843873:G:A
                                        Gene:
                                        LPGAT1-AS1 (Varview)
                                        Functional Consequence:
                                        intron_variant
                                        Validated:
                                        by frequency,by alfa
                                        MAF:
                                        A=0./0 (ALFA)
                                        A=0.000011/3 (TOPMED)
                                        HGVS:
                                        20.

                                        rs1489527453 [Homo sapiens]
                                          Variant type:
                                          SNV
                                          Alleles:
                                          A>G,T [Show Flanks]
                                          Chromosome:
                                          1:211829556 (GRCh38)
                                          1:212002898 (GRCh37)
                                          Canonical SPDI:
                                          NC_000001.11:211829555:A:G,NC_000001.11:211829555:A:T
                                          Gene:
                                          LPGAT1 (Varview), LPGAT1-AS1 (Varview)
                                          Functional Consequence:
                                          intron_variant,upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant
                                          Validated:
                                          by frequency,by alfa,by cluster
                                          MAF:
                                          G=0./0 (ALFA)
                                          G=0.000004/1 (TOPMED)
                                          G=0.000007/1 (GnomAD)
                                          T=0.000071/2 (TOMMO)
                                          HGVS:

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