SNP Links for Gene (Select 102723640) - SNP

Links from Gene

Items: 1 to 20 of 5757

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Select item 14908031411.

rs1490803141 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:72621552 (GRCh38)
15:72913893 (GRCh37)
Canonical SPDI:: NC_000015.10:72621551:C:G
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.72621552C>G, NC_000015.9:g.72913893C>G

Select item 14907616622.

rs1490761662 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 15:72625613 (GRCh38)
15:72917954 (GRCh37)
Canonical SPDI:: NC_000015.10:72625612:T:A
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000122/2 (ALFA)
A=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.72625613T>A, NC_000015.9:g.72917954T>A

Select item 14905226393.

rs1490522639 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:72620511 (GRCh38)
15:72912852 (GRCh37)
Canonical SPDI:: NC_000015.10:72620510:G:A
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.72620511G>A, NC_000015.9:g.72912852G>A

Select item 14903110474.

rs1490311047 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:72622009 (GRCh38)
15:72914350 (GRCh37)
Canonical SPDI:: NC_000015.10:72622008:C:T
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.72622009C>T, NC_000015.9:g.72914350C>T

Select item 14900959875.

rs1490095987 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:72623115 (GRCh38)
15:72915456 (GRCh37)
Canonical SPDI:: NC_000015.10:72623114:A:G
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000071/1 (TOMMO)
HGVS:: NC_000015.10:g.72623115A>G, NC_000015.9:g.72915456A>G

Select item 14899723966.

rs1489972396 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:72638406 (GRCh38)
15:72930747 (GRCh37)
Canonical SPDI:: NC_000015.10:72638405:G:T
Gene:: LINC02259 (Varview), LOC112268145 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000015.10:g.72638406G>T, NC_000015.9:g.72930747G>T

Select item 14899454107.

rs1489945410 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:72626754 (GRCh38)
15:72919095 (GRCh37)
Canonical SPDI:: NC_000015.10:72626753:T:C
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.0002/1 (ALFA)
HGVS:: NC_000015.10:g.72626754T>C, NC_000015.9:g.72919095T>C

Select item 14899358308.

rs1489935830 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:72622597 (GRCh38)
15:72914938 (GRCh37)
Canonical SPDI:: NC_000015.10:72622596:A:G
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.72622597A>G, NC_000015.9:g.72914938A>G

Select item 14897089649.

rs1489708964 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:72615550 (GRCh38)
15:72907891 (GRCh37)
Canonical SPDI:: NC_000015.10:72615549:T:C
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000041/1 (GnomAD)
HGVS:: NC_000015.10:g.72615550T>C, NC_000015.9:g.72907891T>C

Select item 148970804610.

rs1489708046 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 15:72612087 (GRCh38)
15:72904428 (GRCh37)
Canonical SPDI:: NC_000015.10:72612086:A:G,NC_000015.10:72612086:A:T
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000029/2 (GnomAD)
T=0.000131/2 (TOMMO)
HGVS:: NC_000015.10:g.72612087A>G, NC_000015.10:g.72612087A>T, NC_000015.9:g.72904428A>G, NC_000015.9:g.72904428A>T, NG_006018.3:g.7010A>G, NG_006018.3:g.7010A>T

Select item 148961273411.

rs1489612734 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:72629976 (GRCh38)
15:72922317 (GRCh37)
Canonical SPDI:: NC_000015.10:72629975:G:A
Gene:: LINC02259 (Varview), LOC112268145 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000035/1 (TOMMO)
A=0.000068/18 (TOPMED)
HGVS:: NC_000015.10:g.72629976G>A, NC_000015.9:g.72922317G>A

Select item 148955727212.

rs1489557272 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:72618504 (GRCh38)
15:72910845 (GRCh37)
Canonical SPDI:: NC_000015.10:72618503:T:C
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000026/7 (TOPMED)
HGVS:: NC_000015.10:g.72618504T>C, NC_000015.9:g.72910845T>C

Select item 148953145313.

rs1489531453 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:72628497 (GRCh38)
15:72920838 (GRCh37)
Canonical SPDI:: NC_000015.10:72628496:G:C
Gene:: LINC02259 (Varview), LOC112268145 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000015.10:g.72628497G>C, NC_000015.9:g.72920838G>C

Select item 148946035514.

rs1489460355 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:72630032 (GRCh38)
15:72922373 (GRCh37)
Canonical SPDI:: NC_000015.10:72630031:G:A
Gene:: LINC02259 (Varview), LOC112268145 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000015.10:g.72630032G>A, NC_000015.9:g.72922373G>A

Select item 148944135415.

rs1489441354 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:72620194 (GRCh38)
15:72912535 (GRCh37)
Canonical SPDI:: NC_000015.10:72620193:T:C
Gene:: LINC02259 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.72620194T>C, NC_000015.9:g.72912535T>C

Select item 148940024616.

rs1489400246 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:72636231 (GRCh38)
15:72928572 (GRCh37)
Canonical SPDI:: NC_000015.10:72636230:T:C
Gene:: LINC02259 (Varview), LOC112268145 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00008/1 (ALFA)
C=0.00004/2 (GnomAD)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000015.10:g.72636231T>C, NC_000015.9:g.72928572T>C

Select item 148926662717.

rs1489266627 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 15:72632797 (GRCh38)
15:72925138 (GRCh37)
Canonical SPDI:: NC_000015.10:72632796:C:A
Gene:: LINC02259 (Varview), LOC112268145 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.72632797C>A, NC_000015.9:g.72925138C>A

Select item 148925840118.

rs1489258401 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:72637622 (GRCh38)
15:72929963 (GRCh37)
Canonical SPDI:: NC_000015.10:72637621:A:G
Gene:: LINC02259 (Varview), LOC112268145 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000015.10:g.72637622A>G, NC_000015.9:g.72929963A>G

Select item 148920748719.

rs1489207487 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:72636623 (GRCh38)
15:72928964 (GRCh37)
Canonical SPDI:: NC_000015.10:72636622:T:C
Gene:: LINC02259 (Varview), LOC112268145 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.00001/1 (GnomAD)
HGVS:: NC_000015.10:g.72636623T>C, NC_000015.9:g.72928964T>C

Select item 148912372220.

rs1489123722 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:72637273 (GRCh38)
15:72929614 (GRCh37)
Canonical SPDI:: NC_000015.10:72637272:G:A,NC_000015.10:72637272:G:T
Gene:: LINC02259 (Varview), LOC112268145 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000008/1 (GnomAD)
HGVS:: NC_000015.10:g.72637273G>A, NC_000015.10:g.72637273G>T, NC_000015.9:g.72929614G>A, NC_000015.9:g.72929614G>T

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