SNP Links for Gene (Select 102723590) - SNP

Links from Gene

Items: 1 to 20 of 992

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Select item 14909049351.

rs1490904935 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 20:57212687 (GRCh38)
20:55787743 (GRCh37)
Canonical SPDI:: NC_000020.11:57212686:G:A,NC_000020.11:57212686:G:T
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000106/2 (TOMMO)
A=0.000312/2 (1000Genomes)
HGVS:: NC_000020.11:g.57212687G>A, NC_000020.11:g.57212687G>T, NC_000020.10:g.55787743G>A, NC_000020.10:g.55787743G>T, NG_032771.1:g.58965C>T, NG_032771.1:g.58965C>A

Select item 14904157782.

rs1490415778 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->TTTTTT
Chromosome:: no mapping
Canonical SPDI:

Select item 14900712393.

rs1490071239 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:57211723 (GRCh38)
20:55786779 (GRCh37)
Canonical SPDI:: NC_000020.11:57211722:G:A
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.57211723G>A, NC_000020.10:g.55786779G>A, NG_032771.1:g.59929C>T

Select item 14896993434.

rs1489699343 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:57214962 (GRCh38)
20:55790018 (GRCh37)
Canonical SPDI:: NC_000020.11:57214961:G:A
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.57214962G>A, NC_000020.10:g.55790018G>A, NG_032771.1:g.56690C>T

Select item 14880004815.

rs1488000481 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:57215241 (GRCh38)
20:55790297 (GRCh37)
Canonical SPDI:: NC_000020.11:57215240:G:A
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000283/5 (TOMMO)
A=0.000546/1 (Korea1K)
HGVS:: NC_000020.11:g.57215241G>A, NC_000020.10:g.55790297G>A, NG_032771.1:g.56411C>T

Select item 14876354316.

rs1487635431 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:57215776 (GRCh38)
20:55790832 (GRCh37)
Canonical SPDI:: NC_000020.11:57215775:C:T
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000142/2 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000020.11:g.57215776C>T, NC_000020.10:g.55790832C>T, NG_032771.1:g.55876G>A, NR_110631.1:n.922C>T

Select item 14842898977.

rs1484289897 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 20:57211983 (GRCh38)
20:55787039 (GRCh37)
Canonical SPDI:: NC_000020.11:57211982:G:T
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000020.11:g.57211983G>T, NC_000020.10:g.55787039G>T, NG_032771.1:g.59669C>A

Select item 14837186388.

rs1483718638 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 20:57215443 (GRCh38)
20:55790499 (GRCh37)
Canonical SPDI:: NC_000020.11:57215442:G:C
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.57215443G>C, NC_000020.10:g.55790499G>C, NG_032771.1:g.56209C>G

Select item 14835800639.

rs1483580063 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 20:57214691 (GRCh38)
20:55789747 (GRCh37)
Canonical SPDI:: NC_000020.11:57214690:A:C
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.57214691A>C, NC_000020.10:g.55789747A>C, NG_032771.1:g.56961T>G

Select item 148347837610.

rs1483478376 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 20:57212295 (GRCh38)
20:55787351 (GRCh37)
Canonical SPDI:: NC_000020.11:57212294:C:A
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.57212295C>A, NC_000020.10:g.55787351C>A, NG_032771.1:g.59357G>T

Select item 148265948211.

rs1482659482 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 20:57212389 (GRCh38)
20:55787445 (GRCh37)
Canonical SPDI:: NC_000020.11:57212388:G:T
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000021/3 (GnomAD)
T=0.00003/8 (TOPMED)
T=0.000318/5 (TOMMO)
T=0.000342/1 (KOREAN)
T=0.000546/1 (Korea1K)
HGVS:: NC_000020.11:g.57212389G>T, NC_000020.10:g.55787445G>T, NG_032771.1:g.59263C>A

Select item 148233347912.

rs1482333479 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 20:57212717 (GRCh38)
20:55787773 (GRCh37)
Canonical SPDI:: NC_000020.11:57212716:C:G,NC_000020.11:57212716:C:T
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.57212717C>G, NC_000020.11:g.57212717C>T, NC_000020.10:g.55787773C>G, NC_000020.10:g.55787773C>T, NG_032771.1:g.58935G>C, NG_032771.1:g.58935G>A

Select item 148038038313.

rs1480380383 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:57213189 (GRCh38)
20:55788245 (GRCh37)
Canonical SPDI:: NC_000020.11:57213188:C:T
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000020.11:g.57213189C>T, NC_000020.10:g.55788245C>T, NG_032771.1:g.58463G>A

Select item 148037952314.

rs1480379523 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:57214674 (GRCh38)
20:55789730 (GRCh37)
Canonical SPDI:: NC_000020.11:57214673:G:A
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000020.11:g.57214674G>A, NC_000020.10:g.55789730G>A, NG_032771.1:g.56978C>T

Select item 148001384315.

rs1480013843 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:57213229 (GRCh38)
20:55788285 (GRCh37)
Canonical SPDI:: NC_000020.11:57213228:C:T
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000020.11:g.57213229C>T, NC_000020.10:g.55788285C>T, NG_032771.1:g.58423G>A

Select item 147893068016.

rs1478930680 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 20:57211704 (GRCh38)
20:55786760 (GRCh37)
Canonical SPDI:: NC_000020.11:57211703:G:A,NC_000020.11:57211703:G:T
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000021/3 (GnomAD)
HGVS:: NC_000020.11:g.57211704G>A, NC_000020.11:g.57211704G>T, NC_000020.10:g.55786760G>A, NC_000020.10:g.55786760G>T, NG_032771.1:g.59948C>T, NG_032771.1:g.59948C>A

Select item 147875411617.

rs1478754116 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:57215396 (GRCh38)
20:55790452 (GRCh37)
Canonical SPDI:: NC_000020.11:57215395:C:T
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000142/2 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000020.11:g.57215396C>T, NC_000020.10:g.55790452C>T, NG_032771.1:g.56256G>A

Select item 147833559918.

rs1478335599 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:57213615 (GRCh38)
20:55788671 (GRCh37)
Canonical SPDI:: NC_000020.11:57213614:G:A
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00016/1 (1000Genomes)
HGVS:: NC_000020.11:g.57213615G>A, NC_000020.10:g.55788671G>A, NG_032771.1:g.58037C>T

Select item 147767388119.

rs1477673881 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:57215884 (GRCh38)
20:55790940 (GRCh37)
Canonical SPDI:: NC_000020.11:57215883:T:C
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000015/2 (GnomAD)
HGVS:: NC_000020.11:g.57215884T>C, NC_000020.10:g.55790940T>C, NG_032771.1:g.55768A>G

Select item 147767361820.

rs1477673618 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:57216186 (GRCh38)
20:55791242 (GRCh37)
Canonical SPDI:: NC_000020.11:57216185:G:A
Gene:: BMP7 (Varview), BMP7-AS1 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.57216186G>A, NC_000020.10:g.55791242G>A, NG_032771.1:g.55466C>T

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