Links from Gene
Items: 1 to 20 of 946
1.
rs1490425776 has merged into rs1389601625 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- C>-
[Show Flanks]
- Chromosome:
- 11:17698556
(GRCh38)
11:17720103
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17698555:CC:C
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
CC=0./0
(
ALFA)
-=0.000015/4
(TOPMED)
- HGVS:
3.
rs1489034834 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 11:17695542
(GRCh38)
11:17717089
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17695541:C:A
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000011/3
(TOPMED)
- HGVS:
4.
rs1488686210 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 11:17695935
(GRCh38)
11:17717482
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17695934:G:A
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0./0
(GnomAD)
A=0.000004/1
(TOPMED)
A=0.000156/1
(1000Genomes)
A=0.000565/1
(Korea1K)
...more- HGVS:
5.
rs1488187405 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,T
[Show Flanks]
- Chromosome:
- 11:17696148
(GRCh38)
11:17717695
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17696147:G:A,NC_000011.10:17696147:G:T
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
6.
rs1487486397 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 11:17697116
(GRCh38)
11:17718663
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17697115:C:G
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
- HGVS:
8.
rs1486359699 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 11:17697594
(GRCh38)
11:17719141
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17697593:T:C
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
...more- HGVS:
9.
rs1483688661 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 11:17698313
(GRCh38)
11:17719860
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17698312:G:A
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
10.
rs1483507663 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 11:17695768
(GRCh38)
11:17717315
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17695767:G:A
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
...more- HGVS:
11.
rs1483061134 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 11:17697915
(GRCh38)
11:17719462
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17697914:G:A
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
12.
rs1483039466 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 11:17697331
(GRCh38)
11:17718878
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17697330:C:T
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
13.
rs1483015015 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 11:17697779
(GRCh38)
11:17719326
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17697778:C:T
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
14.
rs1482927487 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>T
[Show Flanks]
- Chromosome:
- 11:17698448
(GRCh38)
11:17719995
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17698447:G:T
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
15.
rs1482853723 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GCA>-
[Show Flanks]
- Chromosome:
- 11:17694811
(GRCh38)
11:17716358
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17694806:AGCAGCA:AGCA
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AGCA=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
...more- HGVS:
16.
rs1482705119 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A
[Show Flanks]
- Chromosome:
- 11:17698055
(GRCh38)
11:17719602
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17698054:T:A
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
- HGVS:
17.
rs1482408737 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 11:17697010
(GRCh38)
11:17718557
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17697009:C:G
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
18.
rs1479776243 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 11:17696438
(GRCh38)
11:17717985
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17696437:A:G
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
- HGVS:
19.
rs1479016468 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- G>-
[Show Flanks]
- Chromosome:
- 11:17697703
(GRCh38)
11:17719250
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17697702:GG:G
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0./0
(
ALFA)
-=0.000034/9
(TOPMED)
-=0.000043/6
(GnomAD)
...more- HGVS:
20.
rs1478878642 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 11:17695135
(GRCh38)
11:17716682
(GRCh37)
- Canonical SPDI:
- NC_000011.10:17695134:G:A
- Gene:
- LINC02729 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
...more- HGVS: