SNP Links for Gene (Select 102466751) - SNP

Links from Gene

Items: 1 to 20 of 584

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Select item 14894473211.

rs1489447321 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:19114 (GRCh38)
1:19114 (GRCh37)
Canonical SPDI:: NC_000001.11:19113:C:A
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.19114C>A, NC_000001.10:g.19114C>A

Select item 14876231362.

rs1487623136 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:16899 (GRCh38)
1:16899 (GRCh37)
Canonical SPDI:: NC_000001.11:16898:C:G
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: non_coding_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.16899C>G, NC_000001.10:g.16899C>G, NR_024540.1:n.880G>C

Select item 14853328223.

rs1485332822 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 1:17292 (GRCh38)
1:17292 (GRCh37)
Canonical SPDI:: NC_000001.11:17289:CTCT:CT
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: non_coding_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCT=0.000084/1 (ALFA)
-=0.000308/43 (GnomAD)
HGVS:: NC_000001.11:g.17290CT[1], NC_000001.10:g.17290CT[1], NR_024540.1:n.663AG[1]

Select item 14850748784.

rs1485074878 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 1:17885 (GRCh38)
1:17885 (GRCh37)
Canonical SPDI:: NC_000001.11:17884:T:A,NC_000001.11:17884:T:G
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.0012/19 (TOMMO)
A=0.00579/14 (KOREAN)
HGVS:: NC_000001.11:g.17885T>A, NC_000001.11:g.17885T>G, NC_000001.10:g.17885T>A, NC_000001.10:g.17885T>G

Select item 14844128755.

rs1484412875 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:19299 (GRCh38)
1:19299 (GRCh37)
Canonical SPDI:: NC_000001.11:19298:G:A,NC_000001.11:19298:G:T
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00031/5 (ALFA)
A=0.00007/2 (TOMMO)
HGVS:: NC_000001.11:g.19299G>A, NC_000001.11:g.19299G>T, NC_000001.10:g.19299G>A, NC_000001.10:g.19299G>T

Select item 14843659926.

rs1484365992 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAG>- [Show Flanks]
Chromosome:: 1:17173 (GRCh38)
1:17173 (GRCh37)
Canonical SPDI:: NC_000001.11:17169:GAGGAG:GAG
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
HGVS:: NC_000001.11:g.17170GAG[1], NC_000001.10:g.17170GAG[1]

Select item 14843534087.

rs1484353408 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:17046 (GRCh38)
1:17046 (GRCh37)
Canonical SPDI:: NC_000001.11:17045:T:C
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: non_coding_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.000253/3 (ALFA)
C=0.0001/14 (GnomAD)
HGVS:: NC_000001.11:g.17046T>C, NC_000001.10:g.17046T>C, NR_024540.1:n.733A>G

Select item 14837288118.

rs1483728811 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:17971 (GRCh38)
1:17971 (GRCh37)
Canonical SPDI:: NC_000001.11:17970:G:A,NC_000001.11:17970:G:T
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00017/2 (ALFA)
A=0.00063/4 (GnomAD)
A=0.00219/14 (1000Genomes)
HGVS:: NC_000001.11:g.17971G>A, NC_000001.11:g.17971G>T, NC_000001.10:g.17971G>A, NC_000001.10:g.17971G>T, NR_024540.1:n.394C>T, NR_024540.1:n.394C>A

Select item 14834367799.

rs1483436779 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:17598 (GRCh38)
1:17598 (GRCh37)
Canonical SPDI:: NC_000001.11:17597:G:A
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.17598G>A, NC_000001.10:g.17598G>A

Select item 148274858710.

rs1482748587 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:19234 (GRCh38)
1:19234 (GRCh37)
Canonical SPDI:: NC_000001.11:19233:A:G
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000084/1 (ALFA)
G=0.000176/24 (GnomAD)
G=0.003333/2 (NorthernSweden)
HGVS:: NC_000001.11:g.19234A>G, NC_000001.10:g.19234A>G

Select item 148231829311.

rs1482318293 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:17438 (GRCh38)
1:17438 (GRCh37)
Canonical SPDI:: NC_000001.11:17437:C:A,NC_000001.11:17437:C:T
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.17438C>A, NC_000001.11:g.17438C>T, NC_000001.10:g.17438C>A, NC_000001.10:g.17438C>T

Select item 148206562812.

rs1482065628 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:18469 (GRCh38)
1:18469 (GRCh37)
Canonical SPDI:: NC_000001.11:18468:C:G
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
HGVS:: NC_000001.11:g.18469C>G, NC_000001.10:g.18469C>G

Select item 148183223413.

rs1481832234 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:17970 (GRCh38)
1:17970 (GRCh37)
Canonical SPDI:: NC_000001.11:17969:C:T
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00031/2 (1000Genomes)
HGVS:: NC_000001.11:g.17970C>T, NC_000001.10:g.17970C>T, NR_024540.1:n.395G>A

Select item 148046248814.

rs1480462488 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 1:19229 (GRCh38)
1:19229 (GRCh37)
Canonical SPDI:: NC_000001.11:19228:C:A,NC_000001.11:19228:C:G,NC_000001.11:19228:C:T
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.19229C>A, NC_000001.11:g.19229C>G, NC_000001.11:g.19229C>T, NC_000001.10:g.19229C>A, NC_000001.10:g.19229C>G, NC_000001.10:g.19229C>T

Select item 147964652815.

rs1479646528 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:17497 (GRCh38)
1:17497 (GRCh37)
Canonical SPDI:: NC_000001.11:17496:C:T
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000036/5 (GnomAD)
HGVS:: NC_000001.11:g.17497C>T, NC_000001.10:g.17497C>T

Select item 147804119316.

rs1478041193 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:17750 (GRCh38)
1:17750 (GRCh37)
Canonical SPDI:: NC_000001.11:17749:G:A,NC_000001.11:17749:G:T
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000089/12 (GnomAD)
A=0.000468/3 (1000Genomes)
G=0.5/4 (SGDP_PRJ)
HGVS:: NC_000001.11:g.17750G>A, NC_000001.11:g.17750G>T, NC_000001.10:g.17750G>A, NC_000001.10:g.17750G>T

Select item 147800063017.

rs1478000630 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:17388 (GRCh38)
1:17388 (GRCh37)
Canonical SPDI:: NC_000001.11:17387:G:A
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.17388G>A, NC_000001.10:g.17388G>A, NR_106918.1:n.49C>T

Select item 147738258318.

rs1477382583 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:19392 (GRCh38)
1:19392 (GRCh37)
Canonical SPDI:: NC_000001.11:19391:C:A,NC_000001.11:19391:C:T
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00101/12 (ALFA)
A=0.00001/1 (GnomAD)
T=0.00018/3 (TOMMO)
T=0.00212/6 (KOREAN)
HGVS:: NC_000001.11:g.19392C>A, NC_000001.11:g.19392C>T, NC_000001.10:g.19392C>A, NC_000001.10:g.19392C>T

Select item 147580454819.

rs1475804548 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 1:17474 (GRCh38)
1:17474 (GRCh37)
Canonical SPDI:: NC_000001.11:17473:C:A,NC_000001.11:17473:C:G,NC_000001.11:17473:C:T
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000051/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.17474C>A, NC_000001.11:g.17474C>G, NC_000001.11:g.17474C>T, NC_000001.10:g.17474C>A, NC_000001.10:g.17474C>G, NC_000001.10:g.17474C>T

Select item 147563639720.

rs1475636397 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:17441 (GRCh38)
1:17441 (GRCh37)
Canonical SPDI:: NC_000001.11:17440:C:G
Gene:: WASH7P (Varview), MIR6859-1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.17441C>G, NC_000001.10:g.17441C>G

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