SNP Links for Gene (Select 102465837) - SNP

Links from Gene

Items: 1 to 20 of 522

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Select item 14901653021.

rs1490165302 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 4:146408565 (GRCh38)
4:147329717 (GRCh37)
Canonical SPDI:: NC_000004.12:146408564:G:C
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant,3_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.146408565G>C, NC_000004.11:g.147329717G>C, XM_017008690.3:c.*3528C>G

Select item 14895542282.

rs1489554228 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:146407047 (GRCh38)
4:147328199 (GRCh37)
Canonical SPDI:: NC_000004.12:146407046:T:C
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.146407047T>C, NC_000004.11:g.147328199T>C

Select item 14885388033.

rs1488538803 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:146407707 (GRCh38)
4:147328859 (GRCh37)
Canonical SPDI:: NC_000004.12:146407706:A:G
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant,3_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.146407707A>G, NC_000004.11:g.147328859A>G, XM_017008690.3:c.*4386T>C

Select item 14882135264.

rs1488213526 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 4:146407177 (GRCh38)
4:147328329 (GRCh37)
Canonical SPDI:: NC_000004.12:146407176:G:A,NC_000004.12:146407176:G:C
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.146407177G>A, NC_000004.12:g.146407177G>C, NC_000004.11:g.147328329G>A, NC_000004.11:g.147328329G>C

Select item 14871618635.

rs1487161863 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:146406861 (GRCh38)
4:147328013 (GRCh37)
Canonical SPDI:: NC_000004.12:146406860:T:C
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000004.12:g.146406861T>C, NC_000004.11:g.147328013T>C

Select item 14868266836.

rs1486826683 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:146407997 (GRCh38)
4:147329149 (GRCh37)
Canonical SPDI:: NC_000004.12:146407996:T:C
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.146407997T>C, NC_000004.11:g.147329149T>C, XM_017008690.3:c.*4096A>G

Select item 14866365587.

rs1486636558 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:146406769 (GRCh38)
4:147327921 (GRCh37)
Canonical SPDI:: NC_000004.12:146406768:G:A
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.146406769G>A, NC_000004.11:g.147327921G>A

Select item 14852382408.

rs1485238240 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:146408927 (GRCh38)
4:147330079 (GRCh37)
Canonical SPDI:: NC_000004.12:146408926:T:C
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
C=0.000354/6 (TOMMO)
HGVS:: NC_000004.12:g.146408927T>C, NC_000004.11:g.147330079T>C, XM_017008690.3:c.*3166A>G

Select item 14798529519.

rs1479852951 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:146408676 (GRCh38)
4:147329828 (GRCh37)
Canonical SPDI:: NC_000004.12:146408675:A:G
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.146408676A>G, NC_000004.11:g.147329828A>G, XM_017008690.3:c.*3417T>C, NR_107003.1:n.94A>G

Select item 147953043510.

rs1479530435 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 4:146408224 (GRCh38)
4:147329376 (GRCh37)
Canonical SPDI:: NC_000004.12:146408223:T:C,NC_000004.12:146408223:T:G
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000093/13 (GnomAD)
HGVS:: NC_000004.12:g.146408224T>C, NC_000004.12:g.146408224T>G, NC_000004.11:g.147329376T>C, NC_000004.11:g.147329376T>G, XM_017008690.3:c.*3869A>G, XM_017008690.3:c.*3869A>C

Select item 147896043811.

rs1478960438 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:146407891 (GRCh38)
4:147329043 (GRCh37)
Canonical SPDI:: NC_000004.12:146407890:G:A
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.00308/9 (KOREAN)
A=0.006338/106 (TOMMO)
HGVS:: NC_000004.12:g.146407891G>A, NC_000004.11:g.147329043G>A, XM_017008690.3:c.*4202C>T

Select item 147794613412.

rs1477946134 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 4:146406630 (GRCh38)
4:147327782 (GRCh37)
Canonical SPDI:: NC_000004.12:146406629:A:G,NC_000004.12:146406629:A:T
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000038/10 (TOPMED)
HGVS:: NC_000004.12:g.146406630A>G, NC_000004.12:g.146406630A>T, NC_000004.11:g.147327782A>G, NC_000004.11:g.147327782A>T

Select item 147789395913.

rs1477893959 [Homo sapiens]

Variant type:: DELINS
Alleles:: TAGT>- [Show Flanks]
Chromosome:: 4:146407782 (GRCh38)
4:147328934 (GRCh37)
Canonical SPDI:: NC_000004.12:146407777:TAGTTAGT:TAGT
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TAGTTAGT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.146407778TAGT[1], NC_000004.11:g.147328930TAGT[1], XM_017008690.3:c.*4308ACTA[1]

Select item 147745861814.

rs1477458618 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:146407761 (GRCh38)
4:147328913 (GRCh37)
Canonical SPDI:: NC_000004.12:146407760:A:G
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.146407761A>G, NC_000004.11:g.147328913A>G, XM_017008690.3:c.*4332T>C

Select item 147593922715.

rs1475939227 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:146406744 (GRCh38)
4:147327896 (GRCh37)
Canonical SPDI:: NC_000004.12:146406743:A:G
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_downstream_transcript_variant,downstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.146406744A>G, NC_000004.11:g.147327896A>G

Select item 147588754516.

rs1475887545 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:146406881 (GRCh38)
4:147328033 (GRCh37)
Canonical SPDI:: NC_000004.12:146406880:G:T
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_downstream_transcript_variant,downstream_transcript_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.146406881G>T, NC_000004.11:g.147328033G>T

Select item 147375431617.

rs1473754316 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 4:146408846 (GRCh38)
4:147329998 (GRCh37)
Canonical SPDI:: NC_000004.12:146408845:G:A,NC_000004.12:146408845:G:C
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant,intron_variant,3_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.146408846G>A, NC_000004.12:g.146408846G>C, NC_000004.11:g.147329998G>A, NC_000004.11:g.147329998G>C, XM_017008690.3:c.*3247C>T, XM_017008690.3:c.*3247C>G

Select item 147068341618.

rs1470683416 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 4:146407509 (GRCh38)
4:147328661 (GRCh37)
Canonical SPDI:: NC_000004.12:146407508:T:A,NC_000004.12:146407508:T:C
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_downstream_transcript_variant,upstream_transcript_variant,intron_variant,3_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000004.12:g.146407509T>A, NC_000004.12:g.146407509T>C, NC_000004.11:g.147328661T>A, NC_000004.11:g.147328661T>C, XM_017008690.3:c.*4584A>T, XM_017008690.3:c.*4584A>G

Select item 146633762119.

rs1466337621 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:146407289 (GRCh38)
4:147328441 (GRCh37)
Canonical SPDI:: NC_000004.12:146407288:C:T
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_downstream_transcript_variant,upstream_transcript_variant,intron_variant,3_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.146407289C>T, NC_000004.11:g.147328441C>T, XM_017008690.3:c.*4804G>A

Select item 146566126520.

rs1465661265 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:146407916 (GRCh38)
4:147329068 (GRCh37)
Canonical SPDI:: NC_000004.12:146407915:G:A
Gene:: SLC10A7 (Varview), MIR7849 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_downstream_transcript_variant,upstream_transcript_variant,intron_variant,3_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.146407916G>A, NC_000004.11:g.147329068G>A, XM_017008690.3:c.*4177C>T

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