SNP Links for Gene (Select 101930746) - SNP

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Links from Gene

Items: 1 to 20 of 2032

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Select item 14907916721.

rs1490791672 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:33059152 (GRCh38)
21:34431458 (GRCh37)
Canonical SPDI:: NC_000021.9:33059151:G:A
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000021.9:g.33059152G>A, NC_000021.8:g.34431458G>A

Select item 14903012642.

rs1490301264 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 21:33058640 (GRCh38)
21:34430946 (GRCh37)
Canonical SPDI:: NC_000021.9:33058639:C:A,NC_000021.9:33058639:C:T
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000299/42 (GnomAD)
HGVS:: NC_000021.9:g.33058640C>A, NC_000021.9:g.33058640C>T, NC_000021.8:g.34430946C>A, NC_000021.8:g.34430946C>T

Select item 14900709163.

rs1490070916 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 21:33057871 (GRCh38)
21:34430177 (GRCh37)
Canonical SPDI:: NC_000021.9:33057870:T:C
Gene:: LINC00945 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.33057871T>C, NC_000021.8:g.34430177T>C, NR_104056.1:n.43T>C

Select item 14900600794.

rs1490060079 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 21:33065491 (GRCh38)
21:34437797 (GRCh37)
Canonical SPDI:: NC_000021.9:33065490:C:G
Gene:: LINC00945 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.33065491C>G, NC_000021.8:g.34437797C>G

Select item 14895014275.

rs1489501427 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:33060687 (GRCh38)
21:34432993 (GRCh37)
Canonical SPDI:: NC_000021.9:33060686:G:A
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
HGVS:: NC_000021.9:g.33060687G>A, NC_000021.8:g.34432993G>A

Select item 14885839126.

rs1488583912 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 21:33061164 (GRCh38)
21:34433470 (GRCh37)
Canonical SPDI:: NC_000021.9:33061163:C:G
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000021.9:g.33061164C>G, NC_000021.8:g.34433470C>G

Select item 14884128147.

rs1488412814 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 21:33059796 (GRCh38)
21:34432102 (GRCh37)
Canonical SPDI:: NC_000021.9:33059795:C:G
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000318/5 (TOMMO)
HGVS:: NC_000021.9:g.33059796C>G, NC_000021.8:g.34432102C>G

Select item 14863273258.

rs1486327325 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:33063564 (GRCh38)
21:34435870 (GRCh37)
Canonical SPDI:: NC_000021.9:33063563:C:T
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.33063564C>T, NC_000021.8:g.34435870C>T

Select item 14862975539.

rs1486297553 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:33062590 (GRCh38)
21:34434896 (GRCh37)
Canonical SPDI:: NC_000021.9:33062589:C:T
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000021.9:g.33062590C>T, NC_000021.8:g.34434896C>T

Select item 148627240510.

rs1486272405 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 21:33062344 (GRCh38)
21:34434650 (GRCh37)
Canonical SPDI:: NC_000021.9:33062343:T:C
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000177/3 (TOMMO)
HGVS:: NC_000021.9:g.33062344T>C, NC_000021.8:g.34434650T>C

Select item 148595995311.

rs1485959953 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:33057999 (GRCh38)
21:34430305 (GRCh37)
Canonical SPDI:: NC_000021.9:33057998:G:A
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000021.9:g.33057999G>A, NC_000021.8:g.34430305G>A

Select item 148551343812.

rs1485513438 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:33057549 (GRCh38)
21:34429855 (GRCh37)
Canonical SPDI:: NC_000021.9:33057548:C:T
Gene:: LINC00945 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000066/1 (ALFA)
T=0.000078/11 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000021.9:g.33057549C>T, NC_000021.8:g.34429855C>T

Select item 148525119113.

rs1485251191 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 21:33061142 (GRCh38)
21:34433448 (GRCh37)
Canonical SPDI:: NC_000021.9:33061141:A:G
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.33061142A>G, NC_000021.8:g.34433448A>G

Select item 148498418914.

rs1484984189 [Homo sapiens]

Variant type:: DEL
Alleles:: AGC>- [Show Flanks]
Chromosome:: 21:33060695 (GRCh38)
21:34433001 (GRCh37)
Canonical SPDI:: NC_000021.9:33060694:AGC:
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.000071/1 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.33060695_33060697del, NC_000021.8:g.34433001_34433003del

Select item 148445484815.

rs1484454848 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 21:33056787 (GRCh38)
21:34429093 (GRCh37)
Canonical SPDI:: NC_000021.9:33056786:T:C
Gene:: LINC00945 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0./0 (GnomAD)
C=0.000026/7 (TOPMED)
HGVS:: NC_000021.9:g.33056787T>C, NC_000021.8:g.34429093T>C

Select item 148401732916.

rs1484017329 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 21:33060740 (GRCh38)
21:34433046 (GRCh37)
Canonical SPDI:: NC_000021.9:33060739:C:A
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000021.9:g.33060740C>A, NC_000021.8:g.34433046C>A

Select item 148306020617.

rs1483060206 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:33064498 (GRCh38)
21:34436804 (GRCh37)
Canonical SPDI:: NC_000021.9:33064497:C:T
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.33064498C>T, NC_000021.8:g.34436804C>T

Select item 148303761518.

rs1483037615 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:33064218 (GRCh38)
21:34436524 (GRCh37)
Canonical SPDI:: NC_000021.9:33064217:G:A
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (GnomAD)
A=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.33064218G>A, NC_000021.8:g.34436524G>A

Select item 148290334619.

rs1482903346 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 21:33062452 (GRCh38)
21:34434758 (GRCh37)
Canonical SPDI:: NC_000021.9:33062451:A:G
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.33062452A>G, NC_000021.8:g.34434758A>G

Select item 148280293620.

rs1482802936 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 21:33060090 (GRCh38)
21:34432396 (GRCh37)
Canonical SPDI:: NC_000021.9:33060089:C:G
Gene:: LINC00945 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000021.9:g.33060090C>G, NC_000021.8:g.34432396C>G

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