SNP Links for Gene (Select 101928851) - SNP

Links from Gene

Items: 1 to 20 of 10259

<< First< Prev

Page of 513

Next >Last >>

Select item 14914933231.

rs1491493323 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 4:57439021 (GRCh38)
4:58305187 (GRCh37)
Canonical SPDI:: NC_000004.12:57439020:TG:
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00017/2 (ALFA)
-=0.00156/25 (TOMMO)
-=0.00219/14 (1000Genomes)
-=0.0046/247 (GnomAD)
TG=0.26336/1015 (ALSPAC)
TG=0.27724/1028 (TWINSUK)
HGVS:: NC_000004.12:g.57439021_57439022del, NC_000004.11:g.58305187_58305188del

Select item 14914273362.

rs1491427336 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 4:57429325 (GRCh38)
4:58295491 (GRCh37)
Canonical SPDI:: NC_000004.12:57429324:TT:
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.0008/27 (GnomAD)
HGVS:: NC_000004.12:g.57429325_57429326del, NC_000004.11:g.58295491_58295492del

Select item 14914215223.

rs1491421522 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 4:57429160 (GRCh38)
4:58295326 (GRCh37)
Canonical SPDI:: NC_000004.12:57429158:TCT:T
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.00008/1 (ALFA)
-=0.00002/1 (GnomAD)
HGVS:: NC_000004.12:g.57429160_57429161del, NC_000004.11:g.58295326_58295327del

Select item 14913689984.

rs1491368998 has merged into rs1553882265 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,TTT,TTTT [Show Flanks]
Chromosome:: 4:57426897 (GRCh38)
4:58293063 (GRCh37)
Canonical SPDI:: NC_000004.12:57426895:TTT:T,NC_000004.12:57426895:TTT:TTTT,NC_000004.12:57426895:TTT:TTTTT
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTT=0./0 (ALFA)
-=0.0005/8 (TOMMO)
HGVS:: NC_000004.12:g.57426897_57426898del, NC_000004.12:g.57426898dup, NC_000004.12:g.57426897_57426898dup, NC_000004.11:g.58293063_58293064del, NC_000004.11:g.58293064dup, NC_000004.11:g.58293063_58293064dup, NG_075644.1:g.195_196del, NG_075644.1:g.196dup, NG_075644.1:g.195_196dup

Select item 14913598725.

rs1491359872 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->CCTTTCTT
Chromosome:: no mapping
Canonical SPDI:

Select item 14913580426.

rs1491358042 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 4:57429327 (GRCh38)
4:58295493 (GRCh37)
Canonical SPDI:: NC_000004.12:57429325:TAT:T
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
-=0.00031/10 (GnomAD)
HGVS:: NC_000004.12:g.57429327_57429328del, NC_000004.11:g.58295493_58295494del

Select item 14912259647.

rs1491225964 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 4:57429139 (GRCh38)
4:58295305 (GRCh37)
Canonical SPDI:: NC_000004.12:57429138:CT:
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000004.12:g.57429139_57429140del, NC_000004.11:g.58295305_58295306del

Select item 14912174538.

rs1491217453 [Homo sapiens]

Variant type:: INS
Alleles:: ->C,TC,TCTTTC,TCTTTCTTTC,TCTTTCTTTCTTTC,TCTTTCTTTCTTTCTTTC,TCTTTCTTTCTTTCTTTCTTTC [Show Flanks]
Chromosome:: 4:57429326 (GRCh38)
4:58295493 (GRCh37)
Canonical SPDI:: NC_000004.12:57429326::C,NC_000004.12:57429326::TC,NC_000004.12:57429326::TCTTTC,NC_000004.12:57429326::TCTTTCTTTC,NC_000004.12:57429326::TCTTTCTTTCTTTC,NC_000004.12:57429326::TCTTTCTTTCTTTCTTTC,NC_000004.12:57429326::TCTTTCTTTCTTTCTTTCTTTC
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCTTTC=0./0 (ALFA)
TCTTTCTTTCTTTCTTTCTTTC=0.000004/1 (TOPMED)
TCTTTCTTTCTTTC=0.000041/1 (GnomAD)
HGVS:: NC_000004.12:g.57429326_57429327insC, NC_000004.12:g.57429326_57429327insTC, NC_000004.12:g.57429326_57429327insTCTTTC, NC_000004.12:g.57429326_57429327insTCTTTCTTTC, NC_000004.12:g.57429326_57429327insTCTTTCTTTCTTTC, NC_000004.12:g.57429326_57429327insTCTTTCTTTCTTTCTTTC, NC_000004.12:g.57429326_57429327insTCTTTCTTTCTTTCTTTCTTTC, NC_000004.11:g.58295492_58295493insC, NC_000004.11:g.58295492_58295493insTC, NC_000004.11:g.58295492_58295493insTCTTTC, NC_000004.11:g.58295492_58295493insTCTTTCTTTC, NC_000004.11:g.58295492_58295493insTCTTTCTTTCTTTC, NC_000004.11:g.58295492_58295493insTCTTTCTTTCTTTCTTTC, NC_000004.11:g.58295492_58295493insTCTTTCTTTCTTTCTTTCTTTC

Select item 14912096649.

rs1491209664 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>-,TT,TTT [Show Flanks]
Chromosome:: 4:57429140 (GRCh38)
4:58295306 (GRCh37)
Canonical SPDI:: NC_000004.12:57429139:TTTT:TTT,NC_000004.12:57429139:TTTT:TTTTT,NC_000004.12:57429139:TTTT:TTTTTT
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTT=0./0 (ALFA)
TT=0.00018/3 (TOMMO)
HGVS:: NC_000004.12:g.57429143del, NC_000004.12:g.57429143dup, NC_000004.12:g.57429142_57429143dup, NC_000004.11:g.58295309del, NC_000004.11:g.58295309dup, NC_000004.11:g.58295308_58295309dup

Select item 149101902410.

rs1491019024 has merged into rs58312088 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT,TTTTT,TTTTTTTTT [Show Flanks]
Chromosome:: 4:57439437 (GRCh38)
4:58305603 (GRCh37)
Canonical SPDI:: NC_000004.12:57439426:TTTTTTTTTTTT:TTTTTTTTTT,NC_000004.12:57439426:TTTTTTTTTTTT:TTTTTTTTTTT,NC_000004.12:57439426:TTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000004.12:57439426:TTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000004.12:57439426:TTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000004.12:57439426:TTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
T=0.14333/86 (NorthernSweden)
T=0.225/9 (GENOME_DK)
HGVS:: NC_000004.12:g.57439437_57439438del, NC_000004.12:g.57439438del, NC_000004.12:g.57439438dup, NC_000004.12:g.57439437_57439438dup, NC_000004.12:g.57439436_57439438dup, NC_000004.12:g.57439432_57439438dup, NC_000004.11:g.58305603_58305604del, NC_000004.11:g.58305604del, NC_000004.11:g.58305604dup, NC_000004.11:g.58305603_58305604dup, NC_000004.11:g.58305602_58305604dup, NC_000004.11:g.58305598_58305604dup

Select item 149099586711.

rs1490995867 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:57438101 (GRCh38)
4:58304267 (GRCh37)
Canonical SPDI:: NC_000004.12:57438100:T:G
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.57438101T>G, NC_000004.11:g.58304267T>G

Select item 149097814512.

rs1490978145 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:57451896 (GRCh38)
4:58318062 (GRCh37)
Canonical SPDI:: NC_000004.12:57451895:G:T
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.57451896G>T, NC_000004.11:g.58318062G>T

Select item 149094975513.

rs1490949755 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:57437214 (GRCh38)
4:58303380 (GRCh37)
Canonical SPDI:: NC_000004.12:57437213:A:G
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.57437214A>G, NC_000004.11:g.58303380A>G

Select item 149089670114.

rs1490896701 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:57424948 (GRCh38)
4:58291114 (GRCh37)
Canonical SPDI:: NC_000004.12:57424947:A:T
Gene:: LINC02380 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.57424948A>T, NC_000004.11:g.58291114A>T

Select item 149082356115.

rs1490823561 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:57458604 (GRCh38)
4:58324770 (GRCh37)
Canonical SPDI:: NC_000004.12:57458603:C:T
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000142/2 (TOMMO)
HGVS:: NC_000004.12:g.57458604C>T, NC_000004.11:g.58324770C>T

Select item 149071965416.

rs1490719654 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:57430644 (GRCh38)
4:58296810 (GRCh37)
Canonical SPDI:: NC_000004.12:57430643:A:G
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.57430644A>G, NC_000004.11:g.58296810A>G

Select item 149071932317.

rs1490719323 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:57457664 (GRCh38)
4:58323830 (GRCh37)
Canonical SPDI:: NC_000004.12:57457663:A:G
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000004.12:g.57457664A>G, NC_000004.11:g.58323830A>G

Select item 149070818518.

rs1490708185 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:57443193 (GRCh38)
4:58309359 (GRCh37)
Canonical SPDI:: NC_000004.12:57443192:G:A
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000026/7 (TOPMED)
HGVS:: NC_000004.12:g.57443193G>A, NC_000004.11:g.58309359G>A

Select item 149068219019.

rs1490682190 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:57444134 (GRCh38)
4:58310300 (GRCh37)
Canonical SPDI:: NC_000004.12:57444133:C:T
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000019/5 (TOPMED)
HGVS:: NC_000004.12:g.57444134C>T, NC_000004.11:g.58310300C>T

Select item 149064985520.

rs1490649855 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:57429491 (GRCh38)
4:58295657 (GRCh37)
Canonical SPDI:: NC_000004.12:57429490:C:G
Gene:: LINC02380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000004.12:g.57429491C>G, NC_000004.11:g.58295657C>G

<< First< Prev

Page of 513

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 10259

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity