SNP Links for Gene (Select 101928656) - SNP

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Select item 14915844581.

rs1491584458 has merged into rs34653067 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTT>-,T,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT [Show Flanks]
Chromosome:: 4:177828073 (GRCh38)
4:178749227 (GRCh37)
Canonical SPDI:: NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000004.12:177828062:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTT=0./0 (ALFA)
T=0.0361/139 (ALSPAC)
T=0.0388/144 (TWINSUK)
T=0.3/12 (GENOME_DK)
T=0.4726/2367 (1000Genomes)
HGVS:: NC_000004.12:g.177828073_177828078del, NC_000004.12:g.177828074_177828078del, NC_000004.12:g.177828076_177828078del, NC_000004.12:g.177828077_177828078del, NC_000004.12:g.177828078del, NC_000004.12:g.177828078dup, NC_000004.12:g.177828077_177828078dup, NC_000004.12:g.177828076_177828078dup, NC_000004.12:g.177828075_177828078dup, NC_000004.12:g.177828074_177828078dup, NC_000004.11:g.178749227_178749232del, NC_000004.11:g.178749228_178749232del, NC_000004.11:g.178749230_178749232del, NC_000004.11:g.178749231_178749232del, NC_000004.11:g.178749232del, NC_000004.11:g.178749232dup, NC_000004.11:g.178749231_178749232dup, NC_000004.11:g.178749230_178749232dup, NC_000004.11:g.178749229_178749232dup, NC_000004.11:g.178749228_178749232dup

Select item 14915694672.

rs1491569467 [Homo sapiens]

Variant type:: INS
Alleles:: ->A [Show Flanks]
Chromosome:: 4:177906297 (GRCh38)
4:178827452 (GRCh37)
Canonical SPDI:: NC_000004.12:177906297::A
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00003/2 (GnomAD)
HGVS:: NC_000004.12:g.177906297_177906298insA, NC_000004.11:g.178827451_178827452insA

Select item 14915413923.

rs1491541392 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 4:177828063 (GRCh38)
4:178749218 (GRCh37)
Canonical SPDI:: NC_000004.12:177828063::G
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000004.12:g.177828063_177828064insG, NC_000004.11:g.178749217_178749218insG

Select item 14913324374.

rs1491332437 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 4:177889431 (GRCh38)
4:178810585 (GRCh37)
Canonical SPDI:: NC_000004.12:177889430:CA:
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00944/112 (ALFA)
-=0.00059/49 (GnomAD)
-=0.00202/34 (TOMMO)
HGVS:: NC_000004.12:g.177889431_177889432del, NC_000004.11:g.178810585_178810586del

Select item 14912735235.

rs1491273523 has merged into rs1228991079 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAGA>-,GA [Show Flanks]
Chromosome:: 4:177828392 (GRCh38)
4:178749546 (GRCh37)
Canonical SPDI:: NC_000004.12:177828390:AGAGA:A,NC_000004.12:177828390:AGAGA:AGA
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGA=0./0 (ALFA)
HGVS:: NC_000004.12:g.177828392_177828395del, NC_000004.12:g.177828392GA[1], NC_000004.11:g.178749546_178749549del, NC_000004.11:g.178749546GA[1]

Select item 14912273916.

rs1491227391 has merged into rs34969479 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAAA [Show Flanks]
Chromosome:: 4:177889447 (GRCh38)
4:178810601 (GRCh37)
Canonical SPDI:: NC_000004.12:177889431:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000004.12:177889431:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000004.12:177889431:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000004.12:177889431:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000004.12:177889431:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000004.12:177889431:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000004.12:177889431:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:177889431:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:177889431:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.2985/1495 (1000Genomes)
HGVS:: NC_000004.12:g.177889447_177889451del, NC_000004.12:g.177889448_177889451del, NC_000004.12:g.177889449_177889451del, NC_000004.12:g.177889450_177889451del, NC_000004.12:g.177889451del, NC_000004.12:g.177889451dup, NC_000004.12:g.177889450_177889451dup, NC_000004.12:g.177889449_177889451dup, NC_000004.12:g.177889446_177889451dup, NC_000004.11:g.178810601_178810605del, NC_000004.11:g.178810602_178810605del, NC_000004.11:g.178810603_178810605del, NC_000004.11:g.178810604_178810605del, NC_000004.11:g.178810605del, NC_000004.11:g.178810605dup, NC_000004.11:g.178810604_178810605dup, NC_000004.11:g.178810603_178810605dup, NC_000004.11:g.178810600_178810605dup

Select item 14911620427.

rs1491162042 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,AAAA [Show Flanks]
Chromosome:: 4:177899101 (GRCh38)
4:178820255 (GRCh37)
Canonical SPDI:: NC_000004.12:177899099:AAA:A,NC_000004.12:177899099:AAA:AAAAA
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00017/2 (ALFA)
-=0.0005/8 (TOMMO)
HGVS:: NC_000004.12:g.177899101_177899102del, NC_000004.12:g.177899101_177899102dup, NC_000004.11:g.178820255_178820256del, NC_000004.11:g.178820255_178820256dup

Select item 14910411768.

rs1491041176 has merged into rs201935788 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACACACA>-,CA,CACA,CACACA,CACACACACA,CACACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACA [Show Flanks]
Chromosome:: 4:177899093 (GRCh38)
4:178820247 (GRCh37)
Canonical SPDI:: NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000004.12:177899075:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACA
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACACACACA=0./0 (ALFA)
AC=0.2057/1030 (1000Genomes)
HGVS:: NC_000004.12:g.177899077CA[8], NC_000004.12:g.177899077CA[9], NC_000004.12:g.177899077CA[10], NC_000004.12:g.177899077CA[11], NC_000004.12:g.177899077CA[13], NC_000004.12:g.177899077CA[14], NC_000004.12:g.177899077CA[15], NC_000004.12:g.177899077CA[16], NC_000004.12:g.177899077CA[17], NC_000004.12:g.177899077CA[18], NC_000004.12:g.177899077CA[19], NC_000004.12:g.177899077CA[20], NC_000004.12:g.177899077CA[21], NC_000004.12:g.177899077CA[22], NC_000004.12:g.177899077CA[23], NC_000004.12:g.177899077CA[24], NC_000004.12:g.177899077CA[25], NC_000004.12:g.177899077CA[26], NC_000004.12:g.177899077CA[27], NC_000004.11:g.178820231CA[8], NC_000004.11:g.178820231CA[9], NC_000004.11:g.178820231CA[10], NC_000004.11:g.178820231CA[11], NC_000004.11:g.178820231CA[13], NC_000004.11:g.178820231CA[14], NC_000004.11:g.178820231CA[15], NC_000004.11:g.178820231CA[16], NC_000004.11:g.178820231CA[17], NC_000004.11:g.178820231CA[18], NC_000004.11:g.178820231CA[19], NC_000004.11:g.178820231CA[20], NC_000004.11:g.178820231CA[21], NC_000004.11:g.178820231CA[22], NC_000004.11:g.178820231CA[23], NC_000004.11:g.178820231CA[24], NC_000004.11:g.178820231CA[25], NC_000004.11:g.178820231CA[26], NC_000004.11:g.178820231CA[27]

Select item 14910001759.

rs1491000175 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:177906577 (GRCh38)
4:178827731 (GRCh37)
Canonical SPDI:: NC_000004.12:177906576:C:T
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.177906577C>T, NC_000004.11:g.178827731C>T

Select item 149090877410.

rs1490908774 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:177813674 (GRCh38)
4:178734828 (GRCh37)
Canonical SPDI:: NC_000004.12:177813673:G:T
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.177813674G>T, NC_000004.11:g.178734828G>T

Select item 149090005411.

rs1490900054 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 4:177881122 (GRCh38)
4:178802276 (GRCh37)
Canonical SPDI:: NC_000004.12:177881121:C:A
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.177881122C>A, NC_000004.11:g.178802276C>A

Select item 149088080012.

rs1490880800 has merged into rs148973588 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTT>-,T,TT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 4:177829657 (GRCh38)
4:178750811 (GRCh37)
Canonical SPDI:: NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:177829647:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTT=0./0 (ALFA)
TT=0.3892/1949 (1000Genomes)
HGVS:: NC_000004.12:g.177829657_177829665del, NC_000004.12:g.177829658_177829665del, NC_000004.12:g.177829659_177829665del, NC_000004.12:g.177829661_177829665del, NC_000004.12:g.177829662_177829665del, NC_000004.12:g.177829663_177829665del, NC_000004.12:g.177829664_177829665del, NC_000004.12:g.177829665del, NC_000004.12:g.177829665dup, NC_000004.12:g.177829664_177829665dup, NC_000004.12:g.177829663_177829665dup, NC_000004.12:g.177829662_177829665dup, NC_000004.12:g.177829661_177829665dup, NC_000004.12:g.177829660_177829665dup, NC_000004.12:g.177829659_177829665dup, NC_000004.12:g.177829655_177829665dup, NC_000004.12:g.177829653_177829665dup, NC_000004.12:g.177829652_177829665dup, NC_000004.12:g.177829665_177829666insTTTTTTTTTTTTTTTTTTTT, NC_000004.11:g.178750811_178750819del, NC_000004.11:g.178750812_178750819del, NC_000004.11:g.178750813_178750819del, NC_000004.11:g.178750815_178750819del, NC_000004.11:g.178750816_178750819del, NC_000004.11:g.178750817_178750819del, NC_000004.11:g.178750818_178750819del, NC_000004.11:g.178750819del, NC_000004.11:g.178750819dup, NC_000004.11:g.178750818_178750819dup, NC_000004.11:g.178750817_178750819dup, NC_000004.11:g.178750816_178750819dup, NC_000004.11:g.178750815_178750819dup, NC_000004.11:g.178750814_178750819dup, NC_000004.11:g.178750813_178750819dup, NC_000004.11:g.178750809_178750819dup, NC_000004.11:g.178750807_178750819dup, NC_000004.11:g.178750806_178750819dup, NC_000004.11:g.178750819_178750820insTTTTTTTTTTTTTTTTTTTT

Select item 149088036013.

rs1490880360 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:177844203 (GRCh38)
4:178765357 (GRCh37)
Canonical SPDI:: NC_000004.12:177844202:T:C
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.177844203T>C, NC_000004.11:g.178765357T>C

Select item 149079721814.

rs1490797218 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:177876253 (GRCh38)
4:178797407 (GRCh37)
Canonical SPDI:: NC_000004.12:177876252:G:A
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.177876253G>A, NC_000004.11:g.178797407G>A

Select item 149075796915.

rs1490757969 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:177837373 (GRCh38)
4:178758527 (GRCh37)
Canonical SPDI:: NC_000004.12:177837372:A:T
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.177837373A>T, NC_000004.11:g.178758527A>T

Select item 149075231716.

rs1490752317 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:177890165 (GRCh38)
4:178811319 (GRCh37)
Canonical SPDI:: NC_000004.12:177890164:G:A
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.177890165G>A, NC_000004.11:g.178811319G>A

Select item 149072514617.

rs1490725146 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:177822560 (GRCh38)
4:178743714 (GRCh37)
Canonical SPDI:: NC_000004.12:177822559:C:T
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.177822560C>T, NC_000004.11:g.178743714C>T

Select item 149072384618.

rs1490723846 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:177905711 (GRCh38)
4:178826865 (GRCh37)
Canonical SPDI:: NC_000004.12:177905710:T:C
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.177905711T>C, NC_000004.11:g.178826865T>C

Select item 149068195619.

rs1490681956 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:177838342 (GRCh38)
4:178759496 (GRCh37)
Canonical SPDI:: NC_000004.12:177838341:C:T
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.177838342C>T, NC_000004.11:g.178759496C>T

Select item 149064222320.

rs1490642223 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 4:177829906 (GRCh38)
4:178751060 (GRCh37)
Canonical SPDI:: NC_000004.12:177829905:T:C,NC_000004.12:177829905:T:G
Gene:: LINC01098 (Varview), LINC01099 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.177829906T>C, NC_000004.12:g.177829906T>G, NC_000004.11:g.178751060T>C, NC_000004.11:g.178751060T>G

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