SNP Links for Gene (Select 101928618) - SNP

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Items: 1 to 20 of 1748

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Select item 14915766861.

rs1491576686 has merged into rs369672125 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGTGTG>-,TG,TGTG,TGTGTGTG [Show Flanks]
Chromosome:: 7:36096232 (GRCh38)
7:36135842 (GRCh37)
Canonical SPDI:: NC_000007.14:36096225:TGTGTGTGTGTG:TGTGTG,NC_000007.14:36096225:TGTGTGTGTGTG:TGTGTGTG,NC_000007.14:36096225:TGTGTGTGTGTG:TGTGTGTGTG,NC_000007.14:36096225:TGTGTGTGTGTG:TGTGTGTGTGTGTG
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTG=0./0 (ALFA)
-=0.00011/2 (TOMMO)
-=0.00216/8 (TWINSUK)
-=0.00441/17 (ALSPAC)
HGVS:: NC_000007.14:g.36096226TG[3], NC_000007.14:g.36096226TG[4], NC_000007.14:g.36096226TG[5], NC_000007.14:g.36096226TG[7], NC_000007.13:g.36135836TG[3], NC_000007.13:g.36135836TG[4], NC_000007.13:g.36135836TG[5], NC_000007.13:g.36135836TG[7]

Select item 14913371392.

rs1491337139 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AG [Show Flanks]
Chromosome:: 7:36096236 (GRCh38)
7:36135847 (GRCh37)
Canonical SPDI:: NC_000007.14:36096236:GAG:GAGAG
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GAGAG=0./0 (ALFA)
HGVS:: NC_000007.14:g.36096238_36096239dup, NC_000007.13:g.36135848_36135849dup

Select item 14908749913.

rs1490874991 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:36100304 (GRCh38)
7:36139914 (GRCh37)
Canonical SPDI:: NC_000007.14:36100303:G:A
Gene:: LOC101928618 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000007.14:g.36100304G>A, NC_000007.13:g.36139914G>A, NR_108089.1:n.1384G>A

Select item 14903851644.

rs1490385164 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:36099817 (GRCh38)
7:36139427 (GRCh37)
Canonical SPDI:: NC_000007.14:36099816:A:G
Gene:: LOC101928618 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.36099817A>G, NC_000007.13:g.36139427A>G, NR_108089.1:n.897A>G

Select item 14891133705.

rs1489113370 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 7:36100962 (GRCh38)
7:36140572 (GRCh37)
Canonical SPDI:: NC_000007.14:36100961:T:G
Gene:: LOC101928618 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000007.14:g.36100962T>G, NC_000007.13:g.36140572T>G

Select item 14886572396.

rs1488657239 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 7:36097827 (GRCh38)
7:36137437 (GRCh37)
Canonical SPDI:: NC_000007.14:36097826:AA:A
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
-=0.000023/6 (TOPMED)
-=0.000156/1 (1000Genomes)
HGVS:: NC_000007.14:g.36097828del, NC_000007.13:g.36137438del

Select item 14885069907.

rs1488506990 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:36097307 (GRCh38)
7:36136917 (GRCh37)
Canonical SPDI:: NC_000007.14:36097306:G:A
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.36097307G>A, NC_000007.13:g.36136917G>A

Select item 14880593558.

rs1488059355 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:36098740 (GRCh38)
7:36138350 (GRCh37)
Canonical SPDI:: NC_000007.14:36098739:G:A
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.36098740G>A, NC_000007.13:g.36138350G>A

Select item 14876792609.

rs1487679260 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 7:36093998 (GRCh38)
7:36133608 (GRCh37)
Canonical SPDI:: NC_000007.14:36093997:C:A
Gene:: LOC101928618 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000007.14:g.36093998C>A, NC_000007.13:g.36133608C>A

Select item 148766432210.

rs1487664322 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:36094893 (GRCh38)
7:36134503 (GRCh37)
Canonical SPDI:: NC_000007.14:36094892:G:A
Gene:: LOC101928618 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.36094893G>A, NC_000007.13:g.36134503G>A

Select item 148744010911.

rs1487440109 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:36098399 (GRCh38)
7:36138009 (GRCh37)
Canonical SPDI:: NC_000007.14:36098398:C:T
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.36098399C>T, NC_000007.13:g.36138009C>T

Select item 148714849712.

rs1487148497 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 7:36094394 (GRCh38)
7:36134004 (GRCh37)
Canonical SPDI:: NC_000007.14:36094393:T:C,NC_000007.14:36094393:T:G
Gene:: LOC101928618 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.0038/7 (Korea1K)
HGVS:: NC_000007.14:g.36094394T>C, NC_000007.14:g.36094394T>G, NC_000007.13:g.36134004T>C, NC_000007.13:g.36134004T>G

Select item 148679521413.

rs1486795214 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 7:36095943 (GRCh38)
7:36135554 (GRCh37)
Canonical SPDI:: NC_000007.14:36095943:T:TT
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
T=0.000021/3 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000007.14:g.36095944dup, NC_000007.13:g.36135554dup

Select item 148616509514.

rs1486165095 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 7:36095626 (GRCh38)
7:36135236 (GRCh37)
Canonical SPDI:: NC_000007.14:36095625:G:A,NC_000007.14:36095625:G:T
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000036/5 (GnomAD)
HGVS:: NC_000007.14:g.36095626G>A, NC_000007.14:g.36095626G>T, NC_000007.13:g.36135236G>A, NC_000007.13:g.36135236G>T

Select item 148558159915.

rs1485581599 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:36101046 (GRCh38)
7:36140656 (GRCh37)
Canonical SPDI:: NC_000007.14:36101045:A:G
Gene:: LOC101928618 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000007.14:g.36101046A>G, NC_000007.13:g.36140656A>G

Select item 148552781416.

rs1485527814 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:36096417 (GRCh38)
7:36136027 (GRCh37)
Canonical SPDI:: NC_000007.14:36096416:T:C
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000007.14:g.36096417T>C, NC_000007.13:g.36136027T>C

Select item 148547606817.

rs1485476068 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:36097442 (GRCh38)
7:36137052 (GRCh37)
Canonical SPDI:: NC_000007.14:36097441:C:T
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.36097442C>T, NC_000007.13:g.36137052C>T

Select item 148461703218.

rs1484617032 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 7:36095601 (GRCh38)
7:36135211 (GRCh37)
Canonical SPDI:: NC_000007.14:36095600:G:A,NC_000007.14:36095600:G:T
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.36095601G>A, NC_000007.14:g.36095601G>T, NC_000007.13:g.36135211G>A, NC_000007.13:g.36135211G>T

Select item 148456714719.

rs1484567147 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:36095500 (GRCh38)
7:36135110 (GRCh37)
Canonical SPDI:: NC_000007.14:36095499:T:C
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000007.14:g.36095500T>C, NC_000007.13:g.36135110T>C

Select item 148449122720.

rs1484491227 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 7:36096921 (GRCh38)
7:36136531 (GRCh37)
Canonical SPDI:: NC_000007.14:36096920:G:C
Gene:: LOC101928618 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.36096921G>C, NC_000007.13:g.36136531G>C

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