SNP Links for Gene (Select 101928238) - SNP

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Links from Gene

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Select item 14908027091.

rs1490802709 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9538938 (GRCh38)
19:9649614 (GRCh37)
Canonical SPDI:: NC_000019.10:9538937:C:T
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.9538938C>T, NC_000019.9:g.9649614C>T, NR_134920.1:n.273C>T, NR_134921.1:n.273C>T

Select item 14896686922.

rs1489668692 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:9538959 (GRCh38)
19:9649635 (GRCh37)
Canonical SPDI:: NC_000019.10:9538958:A:G
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000066/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000223/1 (Estonian)
HGVS:: NC_000019.10:g.9538959A>G, NC_000019.9:g.9649635A>G, NR_134920.1:n.294A>G, NR_134921.1:n.294A>G

Select item 14893759143.

rs1489375914 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 19:9537126 (GRCh38)
19:9647802 (GRCh37)
Canonical SPDI:: NC_000019.10:9537125:T:A
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.0002/1 (ALFA)
A=0.0002/1 (Estonian)
HGVS:: NC_000019.10:g.9537126T>A, NC_000019.9:g.9647802T>A

Select item 14883258414.

rs1488325841 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:9536938 (GRCh38)
19:9647614 (GRCh37)
Canonical SPDI:: NC_000019.10:9536937:G:A,NC_000019.10:9536937:G:T
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
T=0.00006/1 (TOMMO)
HGVS:: NC_000019.10:g.9536938G>A, NC_000019.10:g.9536938G>T, NC_000019.9:g.9647614G>A, NC_000019.9:g.9647614G>T

Select item 14877064065.

rs1487706406 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9537002 (GRCh38)
19:9647678 (GRCh37)
Canonical SPDI:: NC_000019.10:9537001:C:T
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000026/7 (TOPMED)
HGVS:: NC_000019.10:g.9537002C>T, NC_000019.9:g.9647678C>T

Select item 14874692696.

rs1487469269 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 19:9539447 (GRCh38)
19:9650123 (GRCh37)
Canonical SPDI:: NC_000019.10:9539446:G:A,NC_000019.10:9539446:G:C
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000019.10:g.9539447G>A, NC_000019.10:g.9539447G>C, NC_000019.9:g.9650123G>A, NC_000019.9:g.9650123G>C, NR_134920.1:n.645G>A, NR_134920.1:n.645G>C, NR_134921.1:n.375G>A, NR_134921.1:n.375G>C

Select item 14872606517.

rs1487260651 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 19:9537088 (GRCh38)
19:9647764 (GRCh37)
Canonical SPDI:: NC_000019.10:9537087:C:A,NC_000019.10:9537087:C:G,NC_000019.10:9537087:C:T
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000019.10:g.9537088C>A, NC_000019.10:g.9537088C>G, NC_000019.10:g.9537088C>T, NC_000019.9:g.9647764C>A, NC_000019.9:g.9647764C>G, NC_000019.9:g.9647764C>T

Select item 14863886218.

rs1486388621 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 19:9538554 (GRCh38)
19:9649230 (GRCh37)
Canonical SPDI:: NC_000019.10:9538553:G:C
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,5_prime_UTR_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.9538554G>C, NC_000019.9:g.9649230G>C, NM_001300883.3:c.-442C>G, NM_001300883.2:c.-442C>G, NM_001300883.1:c.-442C>G

Select item 14859626439.

rs1485962643 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 19:9538622 (GRCh38)
19:9649298 (GRCh37)
Canonical SPDI:: NC_000019.10:9538621:G:A,NC_000019.10:9538621:G:C
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,5_prime_UTR_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00003/8 (TOPMED)
HGVS:: NC_000019.10:g.9538622G>A, NC_000019.10:g.9538622G>C, NC_000019.9:g.9649298G>A, NC_000019.9:g.9649298G>C, NM_001300883.3:c.-510C>T, NM_001300883.3:c.-510C>G, NM_001300883.2:c.-510C>T, NM_001300883.2:c.-510C>G, NM_001300883.1:c.-510C>T, NM_001300883.1:c.-510C>G, NM_024106.3:c.-259C>T, NM_024106.3:c.-259C>G, NM_024106.2:c.-259C>T, NM_024106.2:c.-259C>G, NM_024106.1:c.-259C>T, NM_024106.1:c.-259C>G, NM_001318056.2:c.-259C>T, NM_001318056.2:c.-259C>G, NM_001318056.1:c.-259C>T, NM_001318056.1:c.-259C>G, NM_001318055.2:c.-465C>T, NM_001318055.2:c.-465C>G, NM_001318055.1:c.-465C>T, NM_001318055.1:c.-465C>G

Select item 148475749310.

rs1484757493 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:9538220 (GRCh38)
19:9648896 (GRCh37)
Canonical SPDI:: NC_000019.10:9538219:G:T
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.9538220G>T, NC_000019.9:g.9648896G>T

Select item 148472634911.

rs1484726349 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9537320 (GRCh38)
19:9647996 (GRCh37)
Canonical SPDI:: NC_000019.10:9537319:G:A
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9537320G>A, NC_000019.9:g.9647996G>A

Select item 148445406012.

rs1484454060 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9536922 (GRCh38)
19:9647598 (GRCh37)
Canonical SPDI:: NC_000019.10:9536921:C:T
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.9536922C>T, NC_000019.9:g.9647598C>T

Select item 148354519713.

rs1483545197 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:9538070 (GRCh38)
19:9648746 (GRCh37)
Canonical SPDI:: NC_000019.10:9538069:T:C
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9538070T>C, NC_000019.9:g.9648746T>C

Select item 148346215714.

rs1483462157 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:9539541 (GRCh38)
19:9650217 (GRCh37)
Canonical SPDI:: NC_000019.10:9539540:G:T
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9539541G>T, NC_000019.9:g.9650217G>T, NR_134920.1:n.739G>T, NR_134921.1:n.469G>T

Select item 148280817215.

rs1482808172 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 19:9538810 (GRCh38)
19:9649486 (GRCh37)
Canonical SPDI:: NC_000019.10:9538809:A:T
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.9538810A>T, NC_000019.9:g.9649486A>T, NR_134920.1:n.145A>T, NR_134921.1:n.145A>T

Select item 148251254616.

rs1482512546 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 19:9539624 (GRCh38)
19:9650300 (GRCh37)
Canonical SPDI:: NC_000019.10:9539623:CC:C
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.9539625del, NC_000019.9:g.9650301del, NR_134920.1:n.823del, NR_134921.1:n.553del

Select item 148185475817.

rs1481854758 [Homo sapiens]

Variant type:: DEL
Alleles:: CAGTC>- [Show Flanks]
Chromosome:: 19:9540065 (GRCh38)
19:9650741 (GRCh37)
Canonical SPDI:: NC_000019.10:9540064:CAGTC:
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.00003/8 (TOPMED)
HGVS:: NC_000019.10:g.9540065_9540069del, NC_000019.9:g.9650741_9650745del

Select item 148182352618.

rs1481823526 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:9539181 (GRCh38)
19:9649857 (GRCh37)
Canonical SPDI:: NC_000019.10:9539180:C:G
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9539181C>G, NC_000019.9:g.9649857C>G, NR_134920.1:n.379C>G

Select item 148005259119.

rs1480052591 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9537397 (GRCh38)
19:9648073 (GRCh37)
Canonical SPDI:: NC_000019.10:9537396:C:T
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9537397C>T, NC_000019.9:g.9648073C>T

Select item 147924224120.

rs1479242241 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9538774 (GRCh38)
19:9649450 (GRCh37)
Canonical SPDI:: NC_000019.10:9538773:G:A
Gene:: ZNF426 (Varview), ZNF426-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.9538774G>A, NC_000019.9:g.9649450G>A, NR_134920.1:n.109G>A, NR_134921.1:n.109G>A