SNP Links for Gene (Select 101928200) - SNP

Links from Gene

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Select item 14907495581.

rs1490749558 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:69018057 (GRCh38)
11:68785525 (GRCh37)
Canonical SPDI:: NC_000011.10:69018056:G:T
Gene:: MRGPRF-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.69018057G>T, NC_000011.9:g.68785525G>T, NR_120541.1:n.1177G>T

Select item 14903979152.

rs1490397915 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:69010989 (GRCh38)
11:68778457 (GRCh37)
Canonical SPDI:: NC_000011.10:69010988:G:A
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000036/5 (GnomAD)
HGVS:: NC_000011.10:g.69010989G>A, NC_000011.9:g.68778457G>A, XM_017017170.2:c.-523C>T, XM_017017170.1:c.-523C>T

Select item 14899993533.

rs1489999353 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:69013444 (GRCh38)
11:68780912 (GRCh37)
Canonical SPDI:: NC_000011.10:69013443:T:C
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.69013444T>C, NC_000011.9:g.68780912T>C, XM_024448339.2:c.-103A>G, XM_024448339.1:c.-103A>G

Select item 14898985864.

rs1489898586 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 11:69011901 (GRCh38)
11:68779369 (GRCh37)
Canonical SPDI:: NC_000011.10:69011900:GGGGG:GGGG
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GGGG=0.000071/1 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.69011905del, NC_000011.9:g.68779373del

Select item 14895757965.

rs1489575796 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:69011053 (GRCh38)
11:68778521 (GRCh37)
Canonical SPDI:: NC_000011.10:69011052:A:G
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.69011053A>G, NC_000011.9:g.68778521A>G, XM_017017170.2:c.-587T>C, XM_017017170.1:c.-587T>C

Select item 14887779546.

rs1488777954 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 11:69016528 (GRCh38)
11:68783996 (GRCh37)
Canonical SPDI:: NC_000011.10:69016527:A:C,NC_000011.10:69016527:A:G
Gene:: MRGPRF-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000011.10:g.69016528A>C, NC_000011.10:g.69016528A>G, NC_000011.9:g.68783996A>C, NC_000011.9:g.68783996A>G

Select item 14887066357.

rs1488706635 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:69015338 (GRCh38)
11:68782806 (GRCh37)
Canonical SPDI:: NC_000011.10:69015337:C:A
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.69015338C>A, NC_000011.9:g.68782806C>A

Select item 14886853258.

rs1488685325 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:69014506 (GRCh38)
11:68781974 (GRCh37)
Canonical SPDI:: NC_000011.10:69014505:G:A,NC_000011.10:69014505:G:T
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.69014506G>A, NC_000011.10:g.69014506G>T, NC_000011.9:g.68781974G>A, NC_000011.9:g.68781974G>T, NR_120541.1:n.561G>A, NR_120541.1:n.561G>T

Select item 14886143709.

rs1488614370 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:69014272 (GRCh38)
11:68781740 (GRCh37)
Canonical SPDI:: NC_000011.10:69014271:G:A
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.69014272G>A, NC_000011.9:g.68781740G>A, NR_120541.1:n.451G>A

Select item 148824838510.

rs1488248385 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:69014509 (GRCh38)
11:68781977 (GRCh37)
Canonical SPDI:: NC_000011.10:69014508:G:A
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.69014509G>A, NC_000011.9:g.68781977G>A, NR_120541.1:n.564G>A

Select item 148811929011.

rs1488119290 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 11:69012322 (GRCh38)
11:68779790 (GRCh37)
Canonical SPDI:: NC_000011.10:69012321:GGGG:GGG
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GGG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.69012325del, NC_000011.9:g.68779793del

Select item 148707687512.

rs1487076875 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:69015808 (GRCh38)
11:68783276 (GRCh37)
Canonical SPDI:: NC_000011.10:69015807:G:A
Gene:: MRGPRF-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.69015808G>A, NC_000011.9:g.68783276G>A

Select item 148679283613.

rs1486792836 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CC [Show Flanks]
Chromosome:: 11:69013069 (GRCh38)
11:68780538 (GRCh37)
Canonical SPDI:: NC_000011.10:69013069:CCCC:CCCCCC
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: CCCCCC=0./0 (ALFA)
CC=0./0 (GnomAD)
HGVS:: NC_000011.10:g.69013072_69013073dup, NC_000011.9:g.68780540_68780541dup

Select item 148666290414.

rs1486662904 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CCAT [Show Flanks]
Chromosome:: 11:69016624 (GRCh38)
11:68784093 (GRCh37)
Canonical SPDI:: NC_000011.10:69016624:T:TCCAT
Gene:: MRGPRF-AS1 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000011.10:g.69016625_69016626insCCAT, NC_000011.9:g.68784093_68784094insCCAT

Select item 148651253415.

rs1486512534 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:69013407 (GRCh38)
11:68780875 (GRCh37)
Canonical SPDI:: NC_000011.10:69013406:A:G
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.002/1 (NorthernSweden)
HGVS:: NC_000011.10:g.69013407A>G, NC_000011.9:g.68780875A>G, XM_024448339.2:c.-66T>C, XM_024448339.1:c.-66T>C

Select item 148643422716.

rs1486434227 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCCATCCATCCACCCA>- [Show Flanks]
Chromosome:: 11:69016447 (GRCh38)
11:68783915 (GRCh37)
Canonical SPDI:: NC_000011.10:69016442:CCCATCCATCCATCCACCCA:CCCA
Gene:: MRGPRF-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCA=0.000071/1 (ALFA)
-=0.000015/4 (TOPMED)
-=0.000019/2 (GnomAD)
HGVS:: NC_000011.10:g.69016447_69016462del, NC_000011.9:g.68783915_68783930del

Select item 148614815417.

rs1486148154 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 11:69013817 (GRCh38)
11:68781285 (GRCh37)
Canonical SPDI:: NC_000011.10:69013816:T:C,NC_000011.10:69013816:T:G
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
G=0.000177/3 (TOMMO)
HGVS:: NC_000011.10:g.69013817T>C, NC_000011.10:g.69013817T>G, NC_000011.9:g.68781285T>C, NC_000011.9:g.68781285T>G, NR_120541.1:n.222T>C, NR_120541.1:n.222T>G

Select item 148562262218.

rs1485622622 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 11:69018426 (GRCh38)
11:68785894 (GRCh37)
Canonical SPDI:: NC_000011.10:69018425:T:A
Gene:: MRGPRF-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.69018426T>A, NC_000011.9:g.68785894T>A, NR_120541.1:n.1546T>A

Select item 148561449719.

rs1485614497 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:69012037 (GRCh38)
11:68779505 (GRCh37)
Canonical SPDI:: NC_000011.10:69012036:C:T
Gene:: MRGPRF (Varview), MRGPRF-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000011.10:g.69012037C>T, NC_000011.9:g.68779505C>T

Select item 148511114520.

rs1485111145 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:69016608 (GRCh38)
11:68784076 (GRCh37)
Canonical SPDI:: NC_000011.10:69016607:C:A
Gene:: MRGPRF-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00001/1 (GnomAD)
HGVS:: NC_000011.10:g.69016608C>A, NC_000011.9:g.68784076C>A

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