SNP Links for Gene (Select 101928098) - SNP

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Select item 14915234341.

rs1491523434 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 1:95060128 (GRCh38)
1:95525685 (GRCh37)
Canonical SPDI:: NC_000001.11:95060128::C
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000001.11:g.95060128_95060129insC, NC_000001.10:g.95525684_95525685insC, NG_042044.1:g.17823_17824insG

Select item 14914473332.

rs1491447333 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>- [Show Flanks]
Chromosome:: 1:95060129 (GRCh38)
1:95525685 (GRCh37)
Canonical SPDI:: NC_000001.11:95060127:AAA:A
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00008/1 (ALFA)
-=0.00026/19 (GnomAD)
HGVS:: NC_000001.11:g.95060129_95060130del, NC_000001.10:g.95525685_95525686del, NG_042044.1:g.17823_17824del

Select item 14902109443.

rs1490210944 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:95060062 (GRCh38)
1:95525618 (GRCh37)
Canonical SPDI:: NC_000001.11:95060061:A:T
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.95060062A>T, NC_000001.10:g.95525618A>T, NG_042044.1:g.17890T>A

Select item 14897870854.

rs1489787085 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:95067505 (GRCh38)
1:95533061 (GRCh37)
Canonical SPDI:: NC_000001.11:95067504:T:C
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.95067505T>C, NC_000001.10:g.95533061T>C, NG_042044.1:g.10447A>G, NR_132786.1:n.1056T>C

Select item 14891952255.

rs1489195225 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:95067373 (GRCh38)
1:95532929 (GRCh37)
Canonical SPDI:: NC_000001.11:95067372:T:C
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.95067373T>C, NC_000001.10:g.95532929T>C, NG_042044.1:g.10579A>G, NR_132786.1:n.924T>C

Select item 14886261726.

rs1488626172 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:95060090 (GRCh38)
1:95525646 (GRCh37)
Canonical SPDI:: NC_000001.11:95060089:C:G
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000021/3 (GnomAD)
G=0.000042/11 (TOPMED)
HGVS:: NC_000001.11:g.95060090C>G, NC_000001.10:g.95525646C>G, NG_042044.1:g.17862G>C

Select item 14886079767.

rs1488607976 has merged into rs1211071279 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>-,GG [Show Flanks]
Chromosome:: 1:95065114 (GRCh38)
1:95530670 (GRCh37)
Canonical SPDI:: NC_000001.11:95065113:GGGGGGG:GGGGGG,NC_000001.11:95065113:GGGGGGG:GGGGGGGG
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGGGGGG=0./0 (ALFA)
-=0.000026/7 (TOPMED)
-=0.000156/1 (1000Genomes)
HGVS:: NC_000001.11:g.95065120del, NC_000001.11:g.95065120dup, NC_000001.10:g.95530676del, NC_000001.10:g.95530676dup, NG_042044.1:g.12838del, NG_042044.1:g.12838dup

Select item 14879304318.

rs1487930431 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:95067019 (GRCh38)
1:95532575 (GRCh37)
Canonical SPDI:: NC_000001.11:95067018:T:C
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.95067019T>C, NC_000001.10:g.95532575T>C, NG_042044.1:g.10933A>G

Select item 14875004319.

rs1487500431 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:95060262 (GRCh38)
1:95525818 (GRCh37)
Canonical SPDI:: NC_000001.11:95060261:G:A
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.95060262G>A, NC_000001.10:g.95525818G>A, NG_042044.1:g.17690C>T

Select item 148699041110.

rs1486990411 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:95061035 (GRCh38)
1:95526591 (GRCh37)
Canonical SPDI:: NC_000001.11:95061034:G:T
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.95061035G>T, NC_000001.10:g.95526591G>T, NG_042044.1:g.16917C>A

Select item 148666570811.

rs1486665708 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:95062167 (GRCh38)
1:95527723 (GRCh37)
Canonical SPDI:: NC_000001.11:95062166:C:T
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.95062167C>T, NC_000001.10:g.95527723C>T, NG_042044.1:g.15785G>A, NR_132786.1:n.572C>T

Select item 148547513612.

rs1485475136 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:95064623 (GRCh38)
1:95530179 (GRCh37)
Canonical SPDI:: NC_000001.11:95064622:T:G
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000001.11:g.95064623T>G, NC_000001.10:g.95530179T>G, NG_042044.1:g.13329A>C

Select item 148520290413.

rs1485202904 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:95060003 (GRCh38)
1:95525559 (GRCh37)
Canonical SPDI:: NC_000001.11:95060002:G:A
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.95060003G>A, NC_000001.10:g.95525559G>A, NG_042044.1:g.17949C>T

Select item 148499932514.

rs1484999325 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:95062832 (GRCh38)
1:95528388 (GRCh37)
Canonical SPDI:: NC_000001.11:95062831:G:A,NC_000001.11:95062831:G:C
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.95062832G>A, NC_000001.11:g.95062832G>C, NC_000001.10:g.95528388G>A, NC_000001.10:g.95528388G>C, NG_042044.1:g.15120C>T, NG_042044.1:g.15120C>G

Select item 148480365315.

rs1484803653 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:95063982 (GRCh38)
1:95529538 (GRCh37)
Canonical SPDI:: NC_000001.11:95063981:G:C
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.95063982G>C, NC_000001.10:g.95529538G>C, NG_042044.1:g.13970C>G

Select item 148471685516.

rs1484716855 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 1:95064121 (GRCh38)
1:95529677 (GRCh37)
Canonical SPDI:: NC_000001.11:95064120:C:A,NC_000001.11:95064120:C:G,NC_000001.11:95064120:C:T
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00005/1 (ALFA)
T=0.00022/1 (Estonian)
HGVS:: NC_000001.11:g.95064121C>A, NC_000001.11:g.95064121C>G, NC_000001.11:g.95064121C>T, NC_000001.10:g.95529677C>A, NC_000001.10:g.95529677C>G, NC_000001.10:g.95529677C>T, NG_042044.1:g.13831G>T, NG_042044.1:g.13831G>C, NG_042044.1:g.13831G>A

Select item 148466799117.

rs1484667991 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:95068009 (GRCh38)
1:95533565 (GRCh37)
Canonical SPDI:: NC_000001.11:95068008:C:A
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.95068009C>A, NC_000001.10:g.95533565C>A, NG_042044.1:g.9943G>T

Select item 148459703318.

rs1484597033 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:95066943 (GRCh38)
1:95532499 (GRCh37)
Canonical SPDI:: NC_000001.11:95066942:A:G
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.95066943A>G, NC_000001.10:g.95532499A>G, NG_042044.1:g.11009T>C

Select item 148452383219.

rs1484523832 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:95061730 (GRCh38)
1:95527286 (GRCh37)
Canonical SPDI:: NC_000001.11:95061729:A:T
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.95061730A>T, NC_000001.10:g.95527286A>T, NG_042044.1:g.16222T>A, NR_132786.1:n.135A>T

Select item 148419889020.

rs1484198890 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:95066002 (GRCh38)
1:95531558 (GRCh37)
Canonical SPDI:: NC_000001.11:95066001:C:T
Gene:: ALG14 (Varview), ALG14-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.95066002C>T, NC_000001.10:g.95531558C>T, NG_042044.1:g.11950G>A

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