SNP Links for Gene (Select 101928022) - SNP

Links from Gene

Items: 1 to 20 of 12210

<< First< Prev

Page of 611

Next >Last >>

Select item 14914470161.

rs1491447016 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTCT>-,CTCTCT [Show Flanks]
Chromosome:: 3:150287633 (GRCh38)
3:150005420 (GRCh37)
Canonical SPDI:: NC_000003.12:150287619:TCTCTCTCTCTCTCTCT:TCTCTCTCTCTCT,NC_000003.12:150287619:TCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCT
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TCTCTCTCTCTCTCTCTCT=0./0 (ALFA)
TC=0.00004/4 (GnomAD)
HGVS:: NC_000003.12:g.150287621CT[6], NC_000003.12:g.150287621CT[9], NC_000003.11:g.150005408CT[6], NC_000003.11:g.150005408CT[9]

Select item 14913260922.

rs1491326092 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 3:150287591 (GRCh38)
3:150005378 (GRCh37)
Canonical SPDI:: NC_000003.12:150287590:AT:
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000009/1 (GnomAD)
HGVS:: NC_000003.12:g.150287591_150287592del, NC_000003.11:g.150005378_150005379del

Select item 14912162693.

rs1491216269 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 3:150269824 (GRCh38)
3:149987611 (GRCh37)
Canonical SPDI:: NC_000003.12:150269823:CT:
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.150269824_150269825del, NC_000003.11:g.149987611_149987612del

Select item 14911738594.

rs1491173859 has merged into rs35732382 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT,TTTTTT,TTTTTTT [Show Flanks]
Chromosome:: 3:150269836 (GRCh38)
3:149987623 (GRCh37)
Canonical SPDI:: NC_000003.12:150269824:TTTTTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:150269824:TTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:150269824:TTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000003.12:150269824:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:150269824:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000003.12:150269824:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT
Gene:: LINC01214 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTT=0./0 (ALFA)
-=0.00833/5 (NorthernSweden)
HGVS:: NC_000003.12:g.150269836_150269837del, NC_000003.12:g.150269837del, NC_000003.12:g.150269837dup, NC_000003.12:g.150269836_150269837dup, NC_000003.12:g.150269834_150269837dup, NC_000003.12:g.150269833_150269837dup, NC_000003.11:g.149987623_149987624del, NC_000003.11:g.149987624del, NC_000003.11:g.149987624dup, NC_000003.11:g.149987623_149987624dup, NC_000003.11:g.149987621_149987624dup, NC_000003.11:g.149987620_149987624dup

Select item 14910918185.

rs1491091818 has merged into rs56122374 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>- [Show Flanks]
Chromosome:: 3:150287619 (GRCh38)
3:150005406 (GRCh37)
Canonical SPDI:: NC_000003.12:150287617:TTT:T
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.10302/1222 (ALFA)
-=0.08119/1361 (TOMMO)
-=0.15229/279 (Korea1K)
-=0.17162/14952 (GnomAD)
-=0.17167/103 (NorthernSweden)
-=0.175/7 (GENOME_DK)
-=0.21386/793 (TWINSUK)
-=0.23819/918 (ALSPAC)
HGVS:: NC_000003.12:g.150287619_150287620del, NC_000003.11:g.150005406_150005407del

Select item 14910758216.

rs1491075821 has merged into rs35742649 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTT>-,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 3:150290433 (GRCh38)
3:150008220 (GRCh37)
Canonical SPDI:: NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150290422:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC01214 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000003.12:g.150290433_150290438del, NC_000003.12:g.150290436_150290438del, NC_000003.12:g.150290437_150290438del, NC_000003.12:g.150290438del, NC_000003.12:g.150290438dup, NC_000003.12:g.150290437_150290438dup, NC_000003.12:g.150290436_150290438dup, NC_000003.12:g.150290435_150290438dup, NC_000003.12:g.150290434_150290438dup, NC_000003.12:g.150290433_150290438dup, NC_000003.12:g.150290432_150290438dup, NC_000003.12:g.150290428_150290438dup, NC_000003.11:g.150008220_150008225del, NC_000003.11:g.150008223_150008225del, NC_000003.11:g.150008224_150008225del, NC_000003.11:g.150008225del, NC_000003.11:g.150008225dup, NC_000003.11:g.150008224_150008225dup, NC_000003.11:g.150008223_150008225dup, NC_000003.11:g.150008222_150008225dup, NC_000003.11:g.150008221_150008225dup, NC_000003.11:g.150008220_150008225dup, NC_000003.11:g.150008219_150008225dup, NC_000003.11:g.150008215_150008225dup

Select item 14910341647.

rs1491034164 [Homo sapiens]

Variant type:: SNV:
Alleles:: CA>-
Chromosome:: no mapping
Canonical SPDI:

Select item 14909808878.

rs1490980887 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:150301486 (GRCh38)
3:150019273 (GRCh37)
Canonical SPDI:: NC_000003.12:150301485:G:T
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.150301486G>T, NC_000003.11:g.150019273G>T

Select item 14909764119.

rs1490976411 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 3:150267325 (GRCh38)
3:149985112 (GRCh37)
Canonical SPDI:: NC_000003.12:150267324:A:T
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000003.12:g.150267325A>T, NC_000003.11:g.149985112A>T

Select item 149096088310.

rs1490960883 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 3:150266103 (GRCh38)
3:149983890 (GRCh37)
Canonical SPDI:: NC_000003.12:150266102:A:T
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.150266103A>T, NC_000003.11:g.149983890A>T

Select item 149089477311.

rs1490894773 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:150273129 (GRCh38)
3:149990916 (GRCh37)
Canonical SPDI:: NC_000003.12:150273128:G:C
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
HGVS:: NC_000003.12:g.150273129G>C, NC_000003.11:g.149990916G>C

Select item 149087774712.

rs1490877747 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:150299763 (GRCh38)
3:150017550 (GRCh37)
Canonical SPDI:: NC_000003.12:150299762:A:G
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.00003/8 (TOPMED)
HGVS:: NC_000003.12:g.150299763A>G, NC_000003.11:g.150017550A>G

Select item 149080549113.

rs1490805491 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>C
Chromosome:: no mapping
Canonical SPDI:

Select item 149078059014.

rs1490780590 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 3:150291308 (GRCh38)
3:150009096 (GRCh37)
Canonical SPDI:: NC_000003.12:150291308:T:TT
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.150291309dup, NC_000003.11:g.150009096dup

Select item 149069585515.

rs1490695855 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:150309748 (GRCh38)
3:150027535 (GRCh37)
Canonical SPDI:: NC_000003.12:150309747:C:T
Gene:: LINC01214 (Varview), LOC107986141 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.150309748C>T, NC_000003.11:g.150027535C>T

Select item 149067862316.

rs1490678623 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:150325346 (GRCh38)
3:150043133 (GRCh37)
Canonical SPDI:: NC_000003.12:150325345:G:A
Gene:: LINC01214 (Varview), LOC107986141 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000003.12:g.150325346G>A, NC_000003.11:g.150043133G>A

Select item 149067044817.

rs1490670448 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 3:150324363 (GRCh38)
3:150042151 (GRCh37)
Canonical SPDI:: NC_000003.12:150324363:TTT:TTTT
Gene:: LINC01214 (Varview), LOC107986141 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TTTT=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.150324366dup, NC_000003.11:g.150042153dup

Select item 149063075018.

rs1490630750 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:150316873 (GRCh38)
3:150034660 (GRCh37)
Canonical SPDI:: NC_000003.12:150316872:G:T
Gene:: LINC01214 (Varview), LOC107986141 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.150316873G>T, NC_000003.11:g.150034660G>T

Select item 149061312519.

rs1490613125 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 3:150318146 (GRCh38)
3:150035933 (GRCh37)
Canonical SPDI:: NC_000003.12:150318145:G:C,NC_000003.12:150318145:G:T
Gene:: LINC01214 (Varview), LOC107986141 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.150318146G>C, NC_000003.12:g.150318146G>T, NC_000003.11:g.150035933G>C, NC_000003.11:g.150035933G>T

Select item 149038840020.

rs1490388400 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:150299197 (GRCh38)
3:150016984 (GRCh37)
Canonical SPDI:: NC_000003.12:150299196:T:C
Gene:: LINC01214 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000015/4 (TOPMED)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000003.12:g.150299197T>C, NC_000003.11:g.150016984T>C

<< First< Prev

Page of 611

Next >Last >>

dbSNP

Result Filters

Validation Status

Publication

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 12210

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity