SNP Links for Gene (Select 101927455) - SNP

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Links from Gene

Items: 1 to 20 of 2663

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Select item 14909429241.

rs1490942924 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:133251913 (GRCh38)
3:132970757 (GRCh37)
Canonical SPDI:: NC_000003.12:133251912:A:G
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.133251913A>G, NC_000003.11:g.132970757A>G

Select item 14907470312.

rs1490747031 [Homo sapiens]

Variant type:: SNV:
Alleles:: A>C
Chromosome:: no mapping
Canonical SPDI:

Select item 14906807393.

rs1490680739 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 3:133258082 (GRCh38)
3:132976926 (GRCh37)
Canonical SPDI:: NC_000003.12:133258081:A:T
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000003.12:g.133258082A>T, NC_000003.11:g.132976926A>T

Select item 14904533694.

rs1490453369 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:133251356 (GRCh38)
3:132970200 (GRCh37)
Canonical SPDI:: NC_000003.12:133251355:A:G
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000003.12:g.133251356A>G, NC_000003.11:g.132970200A>G

Select item 14899625785.

rs1489962578 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 3:133251786 (GRCh38)
3:132970630 (GRCh37)
Canonical SPDI:: NC_000003.12:133251785:A:T
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.133251786A>T, NC_000003.11:g.132970630A>T

Select item 14899282966.

rs1489928296 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:133256745 (GRCh38)
3:132975589 (GRCh37)
Canonical SPDI:: NC_000003.12:133256744:G:A
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.133256745G>A, NC_000003.11:g.132975589G>A

Select item 14894744377.

rs1489474437 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:133250401 (GRCh38)
3:132969245 (GRCh37)
Canonical SPDI:: NC_000003.12:133250400:C:T
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000003.12:g.133250401C>T, NC_000003.11:g.132969245C>T

Select item 14892920578.

rs1489292057 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 3:133258698 (GRCh38)
3:132977542 (GRCh37)
Canonical SPDI:: NC_000003.12:133258697:G:
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.133258698del, NC_000003.11:g.132977542del

Select item 14889725519.

rs1488972551 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 3:133248903 (GRCh38)
3:132967747 (GRCh37)
Canonical SPDI:: NC_000003.12:133248902:A:C
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.133248903A>C, NC_000003.11:g.132967747A>C

Select item 148852389810.

rs1488523898 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:133251791 (GRCh38)
3:132970635 (GRCh37)
Canonical SPDI:: NC_000003.12:133251790:C:T
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.133251791C>T, NC_000003.11:g.132970635C>T

Select item 148844302111.

rs1488443021 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:133258468 (GRCh38)
3:132977312 (GRCh37)
Canonical SPDI:: NC_000003.12:133258467:A:G
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.133258468A>G, NC_000003.11:g.132977312A>G

Select item 148827060212.

rs1488270602 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: 3:133246489 (GRCh38)
3:132965334 (GRCh37)
Canonical SPDI:: NC_000003.12:133246489::T
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000003.12:g.133246489_133246490insT, NC_000003.11:g.132965333_132965334insT, NR_110812.1:n.2296_2297insA

Select item 148810238713.

rs1488102387 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:133253994 (GRCh38)
3:132972838 (GRCh37)
Canonical SPDI:: NC_000003.12:133253993:T:C
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.0002/1 (ALFA)
C=0.0002/1 (Estonian)
HGVS:: NC_000003.12:g.133253994T>C, NC_000003.11:g.132972838T>C

Select item 148786587714.

rs1487865877 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 3:133254376 (GRCh38)
3:132973220 (GRCh37)
Canonical SPDI:: NC_000003.12:133254375:C:G
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.133254376C>G, NC_000003.11:g.132973220C>G

Select item 148746839415.

rs1487468394 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:133251359 (GRCh38)
3:132970203 (GRCh37)
Canonical SPDI:: NC_000003.12:133251358:G:T
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.133251359G>T, NC_000003.11:g.132970203G>T

Select item 148660188116.

rs1486601881 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:133247717 (GRCh38)
3:132966561 (GRCh37)
Canonical SPDI:: NC_000003.12:133247716:T:C
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.133247717T>C, NC_000003.11:g.132966561T>C, NR_110812.1:n.1069A>G

Select item 148645282517.

rs1486452825 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:133252071 (GRCh38)
3:132970915 (GRCh37)
Canonical SPDI:: NC_000003.12:133252070:A:G
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.133252071A>G, NC_000003.11:g.132970915A>G

Select item 148638023418.

rs1486380234 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>- [Show Flanks]
Chromosome:: 3:133251044 (GRCh38)
3:132969888 (GRCh37)
Canonical SPDI:: NC_000003.12:133251040:ATATA:ATA
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: ATA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.133251042TA[1], NC_000003.11:g.132969886TA[1]

Select item 148622684019.

rs1486226840 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:133254393 (GRCh38)
3:132973237 (GRCh37)
Canonical SPDI:: NC_000003.12:133254392:T:C
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.133254393T>C, NC_000003.11:g.132973237T>C

Select item 148608841720.

rs1486088417 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 3:133255775 (GRCh38)
3:132974619 (GRCh37)
Canonical SPDI:: NC_000003.12:133255774:GG:G
Gene:: TMEM108 (Varview), TMEM108-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.133255776del, NC_000003.11:g.132974620del

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