Links from Gene
Items: 1 to 20 of 6748
2.
rs1491446994 has merged into rs1429373050 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- T>-,TT
[Show Flanks]
- Chromosome:
- 7:7272517
(GRCh38)
7:7312148
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7272516:TTTTTTTT:TTTTTTT,NC_000007.14:7272516:TTTTTTTT:TTTTTTTTT
- Gene:
- LINC03016 (Varview), LOC107986764 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTT=0./0
(
ALFA)
-=0.000045/12
(TOPMED)
T=0.00006/1
(TOMMO)
...more- HGVS:
3.
rs1491423945 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-
[Show Flanks]
- Chromosome:
- 7:7254683
(GRCh38)
7:7294314
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7254678:AAAAAA:AAAA
- Gene:
- LINC03016 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAA=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
...more- HGVS:
4.
rs1491375649 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TTTAAAAAG
[Show Flanks]
- Chromosome:
- 7:7254679
(GRCh38)
7:7294311
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7254679:AAAAAGTTTAAAAAG:AAAAAGTTTAAAAAGTTTAAAAAG
- Gene:
- LINC03016 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
AAAAAGTTTAAAAAGTTTAAAAAG=0./0
(
ALFA)
AAAAAGTTT=0.000008/2
(TOPMED)
- HGVS:
5.
rs1491236921 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GTTT
[Show Flanks]
- Chromosome:
- 7:7278564
(GRCh38)
7:7318196
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7278564:T:TGTTT
- Gene:
- LINC03016 (Varview), LOC107986764 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TGTTT=0./0
(
ALFA)
TGTT=0.000123/13
(GnomAD)
- HGVS:
6.
rs1491220437 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AT>-
[Show Flanks]
- Chromosome:
- 7:7272516
(GRCh38)
7:7312147
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7272515:AT:
- Gene:
- LINC03016 (Varview), LOC107986764 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.000169/2
(
ALFA)
-=0.000156/1
(1000Genomes)
-=0.000214/30
(GnomAD)
-=0.000253/67
(TOPMED)
...more- HGVS:
7.
rs1490906434 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>T
[Show Flanks]
- Chromosome:
- 7:7273309
(GRCh38)
7:7312940
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7273308:G:T
- Gene:
- LINC03016 (Varview), LOC107986764 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
8.
rs1490731242 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>T
[Show Flanks]
- Chromosome:
- 7:7253486
(GRCh38)
7:7293117
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7253485:G:T
- Gene:
- LINC03016 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by cluster
- MAF:
T=0.000021/3
(GnomAD)
T=0.003333/2
(NorthernSweden)
- HGVS:
9.
rs1490572166 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 7:7277564
(GRCh38)
7:7317195
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7277563:C:T
- Gene:
- LINC03016 (Varview), LOC107986764 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000007/1
(GnomAD)
...more- HGVS:
10.
rs1490386928 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 7:7265468
(GRCh38)
7:7305099
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7265467:A:G
- Gene:
- LINC03016 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000014/2
(GnomAD)
- HGVS:
11.
rs1490370623 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CT>-
[Show Flanks]
- Chromosome:
- 7:7261190
(GRCh38)
7:7300821
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7261186:TCTCT:TCT
- Gene:
- LINC03016 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TCT=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
...more- HGVS:
12.
rs1490355681 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 7:7262091
(GRCh38)
7:7301722
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7262090:A:T
- Gene:
- LINC03016 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000023/6
(TOPMED)
...more- HGVS:
13.
rs1490243712 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 7:7255093
(GRCh38)
7:7294724
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7255092:T:C
- Gene:
- LINC03016 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
15.
rs1489976962 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 7:7274945
(GRCh38)
7:7314576
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7274944:G:A
- Gene:
- LINC03016 (Varview), LOC107986764 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
...more- HGVS:
16.
rs1489924469 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 7:7274162
(GRCh38)
7:7313793
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7274161:C:T
- Gene:
- LINC03016 (Varview), LOC107986764 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000007/1
(GnomAD)
...more- HGVS:
18.
rs1489796074 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C,G
[Show Flanks]
- Chromosome:
- 7:7268207
(GRCh38)
7:7307838
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7268206:T:C,NC_000007.14:7268206:T:G
- Gene:
- LINC03016 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
19.
rs1489733585 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TCT>-
[Show Flanks]
- Chromosome:
- 7:7274718
(GRCh38)
7:7314349
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7274711:TCTTCTTCT:TCTTCT
- Gene:
- LINC03016 (Varview), LOC107986764 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TCTTCT=0.000066/1
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
-=0.000223/1
(Estonian)
...more- HGVS:
20.
rs1489716784 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 7:7276615
(GRCh38)
7:7316246
(GRCh37)
- Canonical SPDI:
- NC_000007.14:7276614:C:G,NC_000007.14:7276614:C:T
- Gene:
- LINC03016 (Varview), LOC107986764 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000071/1
(
ALFA)
G=0.000008/2
(TOPMED)
G=0.000014/2
(GnomAD)
...more- HGVS: