SNP Links for Gene (Select 101927059) - SNP

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Items: 1 to 20 of 1875

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Select item 14907095801.

rs1490709580 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 5:114576983 (GRCh38)
5:113912680 (GRCh37)
Canonical SPDI:: NC_000005.10:114576982:T:G
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.114576983T>G, NC_000005.9:g.113912680T>G

Select item 14901388372.

rs1490138837 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:114577030 (GRCh38)
5:113912727 (GRCh37)
Canonical SPDI:: NC_000005.10:114577029:T:C
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000005.10:g.114577030T>C, NC_000005.9:g.113912727T>C

Select item 14899439323.

rs1489943932 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:114579376 (GRCh38)
5:113915073 (GRCh37)
Canonical SPDI:: NC_000005.10:114579375:G:A
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.114579376G>A, NC_000005.9:g.113915073G>A, NR_134282.1:n.157G>A

Select item 14891692674.

rs1489169267 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 5:114575160 (GRCh38)
5:113910857 (GRCh37)
Canonical SPDI:: NC_000005.10:114575159:C:A
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000005.10:g.114575160C>A, NC_000005.9:g.113910857C>A

Select item 14891293275.

rs1489129327 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 5:114578390 (GRCh38)
5:113914087 (GRCh37)
Canonical SPDI:: NC_000005.10:114578389:A:G
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.114578390A>G, NC_000005.9:g.113914087A>G

Select item 14876316086.

rs1487631608 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 5:114577758 (GRCh38)
5:113913455 (GRCh37)
Canonical SPDI:: NC_000005.10:114577757:G:A,NC_000005.10:114577757:G:T
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.114577758G>A, NC_000005.10:g.114577758G>T, NC_000005.9:g.113913455G>A, NC_000005.9:g.113913455G>T

Select item 14871154827.

rs1487115482 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:114578825 (GRCh38)
5:113914522 (GRCh37)
Canonical SPDI:: NC_000005.10:114578824:C:T
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.114578825C>T, NC_000005.9:g.113914522C>T

Select item 14865982338.

rs1486598233 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:114574973 (GRCh38)
5:113910670 (GRCh37)
Canonical SPDI:: NC_000005.10:114574972:C:T
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000005.10:g.114574973C>T, NC_000005.9:g.113910670C>T

Select item 14864996759.

rs1486499675 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 5:114576273 (GRCh38)
5:113911970 (GRCh37)
Canonical SPDI:: NC_000005.10:114576272:C:G
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000026/7 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000005.10:g.114576273C>G, NC_000005.9:g.113911970C>G

Select item 148562245510.

rs1485622455 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:114579263 (GRCh38)
5:113914960 (GRCh37)
Canonical SPDI:: NC_000005.10:114579262:T:C
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.114579263T>C, NC_000005.9:g.113914960T>C

Select item 148481189211.

rs1484811892 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:114578812 (GRCh38)
5:113914509 (GRCh37)
Canonical SPDI:: NC_000005.10:114578811:T:C
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000005.10:g.114578812T>C, NC_000005.9:g.113914509T>C

Select item 148458765712.

rs1484587657 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:114580436 (GRCh38)
5:113916133 (GRCh37)
Canonical SPDI:: NC_000005.10:114580435:T:C
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.114580436T>C, NC_000005.9:g.113916133T>C

Select item 148382087413.

rs1483820874 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 5:114578652 (GRCh38)
5:113914349 (GRCh37)
Canonical SPDI:: NC_000005.10:114578651:T:G
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.114578652T>G, NC_000005.9:g.113914349T>G

Select item 148366020914.

rs1483660209 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:114575869 (GRCh38)
5:113911566 (GRCh37)
Canonical SPDI:: NC_000005.10:114575868:T:C
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.114575869T>C, NC_000005.9:g.113911566T>C

Select item 148311078615.

rs1483110786 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:114578774 (GRCh38)
5:113914471 (GRCh37)
Canonical SPDI:: NC_000005.10:114578773:G:A
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.114578774G>A, NC_000005.9:g.113914471G>A

Select item 148300894816.

rs1483008948 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 5:114575283 (GRCh38)
5:113910980 (GRCh37)
Canonical SPDI:: NC_000005.10:114575282:A:G,NC_000005.10:114575282:A:T
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000005.10:g.114575283A>G, NC_000005.10:g.114575283A>T, NC_000005.9:g.113910980A>G, NC_000005.9:g.113910980A>T

Select item 148282689217.

rs1482826892 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:114577145 (GRCh38)
5:113912842 (GRCh37)
Canonical SPDI:: NC_000005.10:114577144:C:T
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.114577145C>T, NC_000005.9:g.113912842C>T

Select item 148273386218.

rs1482733862 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 5:114574565 (GRCh38)
5:113910262 (GRCh37)
Canonical SPDI:: NC_000005.10:114574564:A:G
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.114574565A>G, NC_000005.9:g.113910262A>G

Select item 148245025319.

rs1482450253 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:114576049 (GRCh38)
5:113911746 (GRCh37)
Canonical SPDI:: NC_000005.10:114576048:C:T
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000005.10:g.114576049C>T, NC_000005.9:g.113911746C>T, NR_134282.1:n.9C>T

Select item 148224325020.

rs1482243250 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 5:114578381 (GRCh38)
5:113914078 (GRCh37)
Canonical SPDI:: NC_000005.10:114578380:A:G
Gene:: LINC01957 (Varview), LOC101927078 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.114578381A>G, NC_000005.9:g.113914078A>G

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