SNP Links for Gene (Select 101410533) - SNP

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Links from Gene

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Select item 14907226871.

rs1490722687 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:63169436 (GRCh38)
8:64081995 (GRCh37)
Canonical SPDI:: NC_000008.11:63169435:T:C
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000011/2 (GnomAD_exomes)
HGVS:: NC_000008.11:g.63169436T>C, NC_000008.10:g.64081995T>C, NG_033226.1:g.5884T>C

Select item 14905507002.

rs1490550700 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:63170008 (GRCh38)
8:64082567 (GRCh37)
Canonical SPDI:: NC_000008.11:63170007:C:T
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.63170008C>T, NC_000008.10:g.64082567C>T, NG_033226.1:g.6456C>T

Select item 14896062923.

rs1489606292 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:63170389 (GRCh38)
8:64082948 (GRCh37)
Canonical SPDI:: NC_000008.11:63170388:T:C
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.63170389T>C, NC_000008.10:g.64082948T>C, NG_033226.1:g.6837T>C

Select item 14889255614.

rs1488925561 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:63167284 (GRCh38)
8:64079843 (GRCh37)
Canonical SPDI:: NC_000008.11:63167283:A:C
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 500B_downstream_variant,2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant
HGVS:: NC_000008.11:g.63167284A>C, NC_000008.10:g.64079843A>C, NG_033226.1:g.3732A>C

Select item 14867929455.

rs1486792945 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 8:63170000 (GRCh38)
8:64082560 (GRCh37)
Canonical SPDI:: NC_000008.11:63170000:TTTTTT:TTTTTTT
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.63170006dup, NC_000008.10:g.64082565dup, NG_033226.1:g.6454dup

Select item 14865909136.

rs1486590913 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:63167384 (GRCh38)
8:64079943 (GRCh37)
Canonical SPDI:: NC_000008.11:63167383:G:A,NC_000008.11:63167383:G:C
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 500B_downstream_variant,2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000008.11:g.63167384G>A, NC_000008.11:g.63167384G>C, NC_000008.10:g.64079943G>A, NC_000008.10:g.64079943G>C, NG_033226.1:g.3832G>A, NG_033226.1:g.3832G>C

Select item 14862451977.

rs1486245197 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 8:63167871 (GRCh38)
8:64080430 (GRCh37)
Canonical SPDI:: NC_000008.11:63167870:G:T
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.63167871G>T, NC_000008.10:g.64080430G>T, NG_033226.1:g.4319G>T, NR_102684.1:n.572C>A

Select item 14843290228.

rs1484329022 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCCTGGCCCCGTAGCTTGCGGGCGGGCG>- [Show Flanks]
Chromosome:: 8:63169060 (GRCh38)
8:64081619 (GRCh37)
Canonical SPDI:: NC_000008.11:63169056:GCGCCCTGGCCCCGTAGCTTGCGGGCGGGCG:GCG
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 5_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GCG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.63169060_63169087del, NC_000008.10:g.64081619_64081646del, NG_033226.1:g.5508_5535del, NM_001277814.2:c.-159_-132del, NM_001277814.1:c.-159_-132del, NM_001277818.2:c.-181_-154del, NM_001277818.1:c.-181_-154del

Select item 14842859499.

rs1484285949 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:63168495 (GRCh38)
8:64081054 (GRCh37)
Canonical SPDI:: NC_000008.11:63168494:T:C
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.63168495T>C, NC_000008.10:g.64081054T>C, NG_033226.1:g.4943T>C

Select item 148411944510.

rs1484119445 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 8:63168059 (GRCh38)
8:64080618 (GRCh37)
Canonical SPDI:: NC_000008.11:63168058:A:C,NC_000008.11:63168058:A:T
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000008.11:g.63168059A>C, NC_000008.11:g.63168059A>T, NC_000008.10:g.64080618A>C, NC_000008.10:g.64080618A>T, NG_033226.1:g.4507A>C, NG_033226.1:g.4507A>T, NR_102684.1:n.384T>G, NR_102684.1:n.384T>A

Select item 148325337611.

rs1483253376 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 8:63169440 (GRCh38)
8:64081999 (GRCh37)
Canonical SPDI:: NC_000008.11:63169439:G:A,NC_000008.11:63169439:G:C,NC_000008.11:63169439:G:T
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.0004/11 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
T=0.001116/5 (Estonian)
HGVS:: NC_000008.11:g.63169440G>A, NC_000008.11:g.63169440G>C, NC_000008.11:g.63169440G>T, NC_000008.10:g.64081999G>A, NC_000008.10:g.64081999G>C, NC_000008.10:g.64081999G>T, NG_033226.1:g.5888G>A, NG_033226.1:g.5888G>C, NG_033226.1:g.5888G>T

Select item 148283542712.

rs1482835427 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:63170126 (GRCh38)
8:64082685 (GRCh37)
Canonical SPDI:: NC_000008.11:63170125:T:C
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.63170126T>C, NC_000008.10:g.64082685T>C, NG_033226.1:g.6574T>C

Select item 148241738713.

rs1482417387 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCA>- [Show Flanks]
Chromosome:: 8:63170195 (GRCh38)
8:64082754 (GRCh37)
Canonical SPDI:: NC_000008.11:63170192:CATCA:CA
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: CA=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000008.11:g.63170195_63170197del, NC_000008.10:g.64082754_64082756del, NG_033226.1:g.6643_6645del

Select item 148123283314.

rs1481232833 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:63169378 (GRCh38)
8:64081937 (GRCh37)
Canonical SPDI:: NC_000008.11:63169377:G:A
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000013/3 (GnomAD_exomes)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000008.11:g.63169378G>A, NC_000008.10:g.64081937G>A, NG_033226.1:g.5826G>A

Select item 147983398615.

rs1479833986 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:63168248 (GRCh38)
8:64080807 (GRCh37)
Canonical SPDI:: NC_000008.11:63168247:G:A
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.63168248G>A, NC_000008.10:g.64080807G>A, NG_033226.1:g.4696G>A, NR_102684.1:n.195C>T

Select item 147970455716.

rs1479704557 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:63167766 (GRCh38)
8:64080325 (GRCh37)
Canonical SPDI:: NC_000008.11:63167765:A:C
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000743/12 (TOMMO)
HGVS:: NC_000008.11:g.63167766A>C, NC_000008.10:g.64080325A>C, NG_033226.1:g.4214A>C, NR_102684.1:n.677T>G

Select item 147794529317.

rs1477945293 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 8:63169672 (GRCh38)
8:64082232 (GRCh37)
Canonical SPDI:: NC_000008.11:63169672::G
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.63169672_63169673insG, NC_000008.10:g.64082231_64082232insG, NG_033226.1:g.6120_6121insG

Select item 147783138218.

rs1477831382 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 8:63169012 (GRCh38)
8:64081571 (GRCh37)
Canonical SPDI:: NC_000008.11:63169011:C:A,NC_000008.11:63169011:C:T
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 5_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000008.11:g.63169012C>A, NC_000008.11:g.63169012C>T, NC_000008.10:g.64081571C>A, NC_000008.10:g.64081571C>T, NG_033226.1:g.5460C>A, NG_033226.1:g.5460C>T, NM_001277814.2:c.-207C>A, NM_001277814.2:c.-207C>T, NM_001277814.1:c.-207C>A, NM_001277814.1:c.-207C>T, NM_001277818.2:c.-229C>A, NM_001277818.2:c.-229C>T, NM_001277818.1:c.-229C>A, NM_001277818.1:c.-229C>T

Select item 147679867019.

rs1476798670 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:63168944 (GRCh38)
8:64081503 (GRCh37)
Canonical SPDI:: NC_000008.11:63168943:C:T
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD_exomes)
T=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.63168944C>T, NC_000008.10:g.64081503C>T, NG_033226.1:g.5392C>T

Select item 147578049020.

rs1475780490 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:63168596 (GRCh38)
8:64081155 (GRCh37)
Canonical SPDI:: NC_000008.11:63168595:G:A
Gene:: YTHDF3 (Varview), YTHDF3-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.63168596G>A, NC_000008.10:g.64081155G>A, NG_033226.1:g.5044G>A, NM_001277813.1:c.-419G>A, NR_102434.1:n.44G>A, NM_152758.5:c.-282G>A, NM_001277815.1:c.-466G>A, NM_001277816.1:c.-349G>A