SNP Links for Gene (Select 100874325) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 769

<< First< Prev

Page of 39

Next >Last >>

Select item 14888405051.

rs1488840505 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:10625539 (GRCh38)
3:10667224 (GRCh37)
Canonical SPDI:: NC_000003.12:10625538:C:T
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000003.12:g.10625539C>T, NC_000003.11:g.10667224C>T, NG_012046.2:g.87493G>A

Select item 14885428032.

rs1488542803 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:10625783 (GRCh38)
3:10667468 (GRCh37)
Canonical SPDI:: NC_000003.12:10625782:T:C
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.10625783T>C, NC_000003.11:g.10667468T>C, NG_012046.2:g.87249A>G

Select item 14882160433.

rs1488216043 [Homo sapiens]

Variant type:: DELINS
Alleles:: AG>- [Show Flanks]
Chromosome:: 3:10626209 (GRCh38)
3:10667894 (GRCh37)
Canonical SPDI:: NC_000003.12:10626202:AGAGAGAG:AGAGAG
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AGAGAG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.10626203AG[3], NC_000003.11:g.10667888AG[3], NG_012046.2:g.86822CT[3], NR_046766.1:n.318CT[3]

Select item 14880576834.

rs1488057683 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:10625881 (GRCh38)
3:10667566 (GRCh37)
Canonical SPDI:: NC_000003.12:10625880:T:C
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.10625881T>C, NC_000003.11:g.10667566T>C, NG_012046.2:g.87151A>G

Select item 14875618875.

rs1487561887 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:10625772 (GRCh38)
3:10667457 (GRCh37)
Canonical SPDI:: NC_000003.12:10625771:T:C
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000342/1 (KOREAN)
C=0.000546/1 (Korea1K)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000003.12:g.10625772T>C, NC_000003.11:g.10667457T>C, NG_012046.2:g.87260A>G

Select item 14872994196.

rs1487299419 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 3:10626560 (GRCh38)
3:10668245 (GRCh37)
Canonical SPDI:: NC_000003.12:10626559:A:C
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.10626560A>C, NC_000003.11:g.10668245A>C, NG_012046.2:g.86472T>G

Select item 14855683847.

rs1485568384 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 3:10627830 (GRCh38)
3:10669515 (GRCh37)
Canonical SPDI:: NC_000003.12:10627829:T:A
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000224/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000223/1 (Estonian)
HGVS:: NC_000003.12:g.10627830T>A, NC_000003.11:g.10669515T>A, NG_012046.2:g.85202A>T

Select item 14853445448.

rs1485344544 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:10628601 (GRCh38)
3:10670286 (GRCh37)
Canonical SPDI:: NC_000003.12:10628600:C:T
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000038/10 (TOPMED)
HGVS:: NC_000003.12:g.10628601C>T, NC_000003.11:g.10670286C>T, NG_012046.2:g.84431G>A

Select item 14852388709.

rs1485238870 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:10626511 (GRCh38)
3:10668196 (GRCh37)
Canonical SPDI:: NC_000003.12:10626510:G:A
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.10626511G>A, NC_000003.11:g.10668196G>A, NG_012046.2:g.86521C>T

Select item 148460624610.

rs1484606246 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:10628442 (GRCh38)
3:10670127 (GRCh37)
Canonical SPDI:: NC_000003.12:10628441:G:C
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.10628442G>C, NC_000003.11:g.10670127G>C, NG_012046.2:g.84590C>G

Select item 148206559611.

rs1482065596 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:10625658 (GRCh38)
3:10667343 (GRCh37)
Canonical SPDI:: NC_000003.12:10625657:G:A
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.10625658G>A, NC_000003.11:g.10667343G>A, NG_012046.2:g.87374C>T

Select item 148013738512.

rs1480137385 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 3:10627355 (GRCh38)
3:10669040 (GRCh37)
Canonical SPDI:: NC_000003.12:10627354:A:T
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.10627355A>T, NC_000003.11:g.10669040A>T, NG_012046.2:g.85677T>A

Select item 147968056213.

rs1479680562 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:10627699 (GRCh38)
3:10669384 (GRCh37)
Canonical SPDI:: NC_000003.12:10627698:A:G
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.10627699A>G, NC_000003.11:g.10669384A>G, NG_012046.2:g.85333T>C

Select item 147931520814.

rs1479315208 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:10626943 (GRCh38)
3:10668628 (GRCh37)
Canonical SPDI:: NC_000003.12:10626942:G:A
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
HGVS:: NC_000003.12:g.10626943G>A, NC_000003.11:g.10668628G>A, NG_012046.2:g.86089C>T

Select item 147817077615.

rs1478170776 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:10627418 (GRCh38)
3:10669103 (GRCh37)
Canonical SPDI:: NC_000003.12:10627417:G:A
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.10627418G>A, NC_000003.11:g.10669103G>A, NG_012046.2:g.85614C>T

Select item 147779970216.

rs1477799702 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 3:10626287 (GRCh38)
3:10667972 (GRCh37)
Canonical SPDI:: NC_000003.12:10626286:T:A
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000003.12:g.10626287T>A, NC_000003.11:g.10667972T>A, NG_012046.2:g.86745A>T, NR_046766.1:n.241A>T

Select item 147732103917.

rs1477321039 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:10626417 (GRCh38)
3:10668102 (GRCh37)
Canonical SPDI:: NC_000003.12:10626416:C:T
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000071/1 (TOMMO)
HGVS:: NC_000003.12:g.10626417C>T, NC_000003.11:g.10668102C>T, NG_012046.2:g.86615G>A, NR_046766.1:n.111G>A

Select item 147616641618.

rs1476166416 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 3:10626698 (GRCh38)
3:10668383 (GRCh37)
Canonical SPDI:: NC_000003.12:10626697:T:A,NC_000003.12:10626697:T:G
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000003.12:g.10626698T>A, NC_000003.12:g.10626698T>G, NC_000003.11:g.10668383T>A, NC_000003.11:g.10668383T>G, NG_012046.2:g.86334A>T, NG_012046.2:g.86334A>C

Select item 147458343519.

rs1474583435 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:10628433 (GRCh38)
3:10670118 (GRCh37)
Canonical SPDI:: NC_000003.12:10628432:C:T
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.10628433C>T, NC_000003.11:g.10670118C>T, NG_012046.2:g.84599G>A

Select item 147419878020.

rs1474198780 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 3:10627528 (GRCh38)
3:10669213 (GRCh37)
Canonical SPDI:: NC_000003.12:10627527:C:A
Gene:: ATP2B2 (Varview), ATP2B2-IT2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.10627528C>A, NC_000003.11:g.10669213C>A, NG_012046.2:g.85504G>T