SNP Links for Gene (Select 100874194) - SNP

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Select item 14915693771.

rs1491569377 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 13:95517933 (GRCh38)
13:96170187 (GRCh37)
Canonical SPDI:: NC_000013.11:95517932:CA:
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000013.11:g.95517933_95517934del, NC_000013.10:g.96170187_96170188del, NG_047100.1:g.89335_89336del

Select item 14915271342.

rs1491527134 [Homo sapiens]

Variant type:: INS
Alleles:: ->AT [Show Flanks]
Chromosome:: 13:95507627 (GRCh38)
13:96159882 (GRCh37)
Canonical SPDI:: NC_000013.11:95507627::AT
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AT=0./0 (ALFA)
AT=0.000055/7 (GnomAD)
HGVS:: NC_000013.11:g.95507627_95507628insAT, NC_000013.10:g.96159881_96159882insAT, NG_047100.1:g.79029_79030insAT

Select item 14914803503.

rs1491480350 has merged into rs796410360 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA,AAAA,AAAAA,AAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 13:95495760 (GRCh38)
13:96148014 (GRCh37)
Canonical SPDI:: NC_000013.11:95495759:AAAA:AAA,NC_000013.11:95495759:AAAA:AAAAA,NC_000013.11:95495759:AAAA:AAAAAAA,NC_000013.11:95495759:AAAA:AAAAAAAA,NC_000013.11:95495759:AAAA:AAAAAAAAAAAAAAAAAAAA
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAA=0./0 (ALFA)
-=0.000157/18 (GnomAD)
AAAA=0.00093/25 (TOMMO)
HGVS:: NC_000013.11:g.95495763del, NC_000013.11:g.95495763dup, NC_000013.11:g.95495761_95495763dup, NC_000013.11:g.95495760_95495763dup, NC_000013.11:g.95495763_95495764insAAAAAAAAAAAAAAAA, NC_000013.10:g.96148017del, NC_000013.10:g.96148017dup, NC_000013.10:g.96148015_96148017dup, NC_000013.10:g.96148014_96148017dup, NC_000013.10:g.96148017_96148018insAAAAAAAAAAAAAAAA, NG_047100.1:g.67165del, NG_047100.1:g.67165dup, NG_047100.1:g.67163_67165dup, NG_047100.1:g.67162_67165dup, NG_047100.1:g.67165_67166insAAAAAAAAAAAAAAAA

Select item 14914492974.

rs1491449297 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 13:95531539 (GRCh38)
13:96183793 (GRCh37)
Canonical SPDI:: NC_000013.11:95531538:CT:
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000034/9 (TOPMED)
-=0.000036/5 (GnomAD)
HGVS:: NC_000013.11:g.95531539_95531540del, NC_000013.10:g.96183793_96183794del, NG_047100.1:g.102941_102942del

Select item 14913899065.

rs1491389906 has merged into rs58919737 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 13:95488958 (GRCh38)
13:96141212 (GRCh37)
Canonical SPDI:: NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000013.11:95488950:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTT=0./0 (ALFA)
HGVS:: NC_000013.11:g.95488958_95488970del, NC_000013.11:g.95488959_95488970del, NC_000013.11:g.95488960_95488970del, NC_000013.11:g.95488961_95488970del, NC_000013.11:g.95488962_95488970del, NC_000013.11:g.95488964_95488970del, NC_000013.11:g.95488965_95488970del, NC_000013.11:g.95488966_95488970del, NC_000013.11:g.95488967_95488970del, NC_000013.11:g.95488968_95488970del, NC_000013.11:g.95488969_95488970del, NC_000013.11:g.95488970del, NC_000013.11:g.95488970dup, NC_000013.11:g.95488969_95488970dup, NC_000013.11:g.95488968_95488970dup, NC_000013.11:g.95488967_95488970dup, NC_000013.11:g.95488966_95488970dup, NC_000013.11:g.95488965_95488970dup, NC_000013.11:g.95488964_95488970dup, NC_000013.11:g.95488963_95488970dup, NC_000013.11:g.95488962_95488970dup, NC_000013.11:g.95488961_95488970dup, NC_000013.11:g.95488960_95488970dup, NC_000013.11:g.95488959_95488970dup, NC_000013.11:g.95488958_95488970dup, NC_000013.11:g.95488957_95488970dup, NC_000013.11:g.95488956_95488970dup, NC_000013.11:g.95488953_95488970dup, NC_000013.11:g.95488970_95488971insTTTTTTTTTTTTTTTTTTTTTT, NC_000013.11:g.95488970_95488971insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000013.11:g.95488970_95488971insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000013.10:g.96141212_96141224del, NC_000013.10:g.96141213_96141224del, NC_000013.10:g.96141214_96141224del, NC_000013.10:g.96141215_96141224del, NC_000013.10:g.96141216_96141224del, NC_000013.10:g.96141218_96141224del, NC_000013.10:g.96141219_96141224del, NC_000013.10:g.96141220_96141224del, NC_000013.10:g.96141221_96141224del, NC_000013.10:g.96141222_96141224del, NC_000013.10:g.96141223_96141224del, NC_000013.10:g.96141224del, NC_000013.10:g.96141224dup, NC_000013.10:g.96141223_96141224dup, NC_000013.10:g.96141222_96141224dup, NC_000013.10:g.96141221_96141224dup, NC_000013.10:g.96141220_96141224dup, NC_000013.10:g.96141219_96141224dup, NC_000013.10:g.96141218_96141224dup, NC_000013.10:g.96141217_96141224dup, NC_000013.10:g.96141216_96141224dup, NC_000013.10:g.96141215_96141224dup, NC_000013.10:g.96141214_96141224dup, NC_000013.10:g.96141213_96141224dup, NC_000013.10:g.96141212_96141224dup, NC_000013.10:g.96141211_96141224dup, NC_000013.10:g.96141210_96141224dup, NC_000013.10:g.96141207_96141224dup, NC_000013.10:g.96141224_96141225insTTTTTTTTTTTTTTTTTTTTTT, NC_000013.10:g.96141224_96141225insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000013.10:g.96141224_96141225insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NG_047100.1:g.60360_60372del, NG_047100.1:g.60361_60372del, NG_047100.1:g.60362_60372del, NG_047100.1:g.60363_60372del, NG_047100.1:g.60364_60372del, NG_047100.1:g.60366_60372del, NG_047100.1:g.60367_60372del, NG_047100.1:g.60368_60372del, NG_047100.1:g.60369_60372del, NG_047100.1:g.60370_60372del, NG_047100.1:g.60371_60372del, NG_047100.1:g.60372del, NG_047100.1:g.60372dup, NG_047100.1:g.60371_60372dup, NG_047100.1:g.60370_60372dup, NG_047100.1:g.60369_60372dup, NG_047100.1:g.60368_60372dup, NG_047100.1:g.60367_60372dup, NG_047100.1:g.60366_60372dup, NG_047100.1:g.60365_60372dup, NG_047100.1:g.60364_60372dup, NG_047100.1:g.60363_60372dup, NG_047100.1:g.60362_60372dup, NG_047100.1:g.60361_60372dup, NG_047100.1:g.60360_60372dup, NG_047100.1:g.60359_60372dup, NG_047100.1:g.60358_60372dup, NG_047100.1:g.60355_60372dup, NG_047100.1:g.60372_60373insTTTTTTTTTTTTTTTTTTTTTT, NG_047100.1:g.60372_60373insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NG_047100.1:g.60372_60373insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 14912881006.

rs1491288100 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GAAAAAAAAA [Show Flanks]
Chromosome:: 13:95484866 (GRCh38)
13:96137121 (GRCh37)
Canonical SPDI:: NC_000013.11:95484866:AAAAAAAAA:AAAAAAAAAGAAAAAAAAA
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AAAAAAAAAGAAAAAAAAA=0.00008/1 (ALFA)
HGVS:: NC_000013.11:g.95484867_95484875A[9]GAAAAAAAAA[1], NC_000013.10:g.96137121_96137129A[9]GAAAAAAAAA[1], NG_047100.1:g.56269_56277A[9]GAAAAAAAAA[1]

Select item 14912797987.

rs1491279798 [Homo sapiens]

Variant type:: SNV:
Alleles:: AT>-
Chromosome:: no mapping
Canonical SPDI:

Select item 14911822918.

rs1491182291 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ATT [Show Flanks]
Chromosome:: 13:95524860 (GRCh38)
13:96177115 (GRCh37)
Canonical SPDI:: NC_000013.11:95524860:TT:TTATT
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: TTA=0.002/1 (NorthernSweden)
HGVS:: NC_000013.11:g.95524862_95524863insATT, NC_000013.10:g.96177116_96177117insATT, NG_047100.1:g.96264_96265insATT

Select item 14911603619.

rs1491160361 has merged into rs35780641 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAA>-,AA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 13:95517943 (GRCh38)
13:96170197 (GRCh37)
Canonical SPDI:: NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95517933:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000013.11:g.95517943_95517954del, NC_000013.11:g.95517945_95517954del, NC_000013.11:g.95517948_95517954del, NC_000013.11:g.95517949_95517954del, NC_000013.11:g.95517951_95517954del, NC_000013.11:g.95517952_95517954del, NC_000013.11:g.95517953_95517954del, NC_000013.11:g.95517954del, NC_000013.11:g.95517954dup, NC_000013.11:g.95517953_95517954dup, NC_000013.11:g.95517952_95517954dup, NC_000013.11:g.95517951_95517954dup, NC_000013.11:g.95517950_95517954dup, NC_000013.11:g.95517949_95517954dup, NC_000013.11:g.95517948_95517954dup, NC_000013.11:g.95517947_95517954dup, NC_000013.11:g.95517946_95517954dup, NC_000013.11:g.95517954_95517955insAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000013.10:g.96170197_96170208del, NC_000013.10:g.96170199_96170208del, NC_000013.10:g.96170202_96170208del, NC_000013.10:g.96170203_96170208del, NC_000013.10:g.96170205_96170208del, NC_000013.10:g.96170206_96170208del, NC_000013.10:g.96170207_96170208del, NC_000013.10:g.96170208del, NC_000013.10:g.96170208dup, NC_000013.10:g.96170207_96170208dup, NC_000013.10:g.96170206_96170208dup, NC_000013.10:g.96170205_96170208dup, NC_000013.10:g.96170204_96170208dup, NC_000013.10:g.96170203_96170208dup, NC_000013.10:g.96170202_96170208dup, NC_000013.10:g.96170201_96170208dup, NC_000013.10:g.96170200_96170208dup, NC_000013.10:g.96170208_96170209insAAAAAAAAAAAAAAAAAAAAAAAAAAA, NG_047100.1:g.89345_89356del, NG_047100.1:g.89347_89356del, NG_047100.1:g.89350_89356del, NG_047100.1:g.89351_89356del, NG_047100.1:g.89353_89356del, NG_047100.1:g.89354_89356del, NG_047100.1:g.89355_89356del, NG_047100.1:g.89356del, NG_047100.1:g.89356dup, NG_047100.1:g.89355_89356dup, NG_047100.1:g.89354_89356dup, NG_047100.1:g.89353_89356dup, NG_047100.1:g.89352_89356dup, NG_047100.1:g.89351_89356dup, NG_047100.1:g.89350_89356dup, NG_047100.1:g.89349_89356dup, NG_047100.1:g.89348_89356dup, NG_047100.1:g.89356_89357insAAAAAAAAAAAAAAAAAAAAAAAAAAA

Select item 149111856110.

rs1491118561 has merged into rs746231195 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 13:95484874 (GRCh38)
13:96137128 (GRCh37)
Canonical SPDI:: NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:95484865:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
-=0.0236/91 (ALSPAC)
HGVS:: NC_000013.11:g.95484874_95484895del, NC_000013.11:g.95484876_95484895del, NC_000013.11:g.95484877_95484895del, NC_000013.11:g.95484878_95484895del, NC_000013.11:g.95484879_95484895del, NC_000013.11:g.95484882_95484895del, NC_000013.11:g.95484883_95484895del, NC_000013.11:g.95484884_95484895del, NC_000013.11:g.95484885_95484895del, NC_000013.11:g.95484886_95484895del, NC_000013.11:g.95484887_95484895del, NC_000013.11:g.95484888_95484895del, NC_000013.11:g.95484889_95484895del, NC_000013.11:g.95484890_95484895del, NC_000013.11:g.95484891_95484895del, NC_000013.11:g.95484892_95484895del, NC_000013.11:g.95484893_95484895del, NC_000013.11:g.95484894_95484895del, NC_000013.11:g.95484895del, NC_000013.11:g.95484895dup, NC_000013.11:g.95484894_95484895dup, NC_000013.11:g.95484893_95484895dup, NC_000013.11:g.95484892_95484895dup, NC_000013.11:g.95484891_95484895dup, NC_000013.11:g.95484890_95484895dup, NC_000013.11:g.95484889_95484895dup, NC_000013.11:g.95484888_95484895dup, NC_000013.11:g.95484895_95484896insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000013.10:g.96137128_96137149del, NC_000013.10:g.96137130_96137149del, NC_000013.10:g.96137131_96137149del, NC_000013.10:g.96137132_96137149del, NC_000013.10:g.96137133_96137149del, NC_000013.10:g.96137136_96137149del, NC_000013.10:g.96137137_96137149del, NC_000013.10:g.96137138_96137149del, NC_000013.10:g.96137139_96137149del, NC_000013.10:g.96137140_96137149del, NC_000013.10:g.96137141_96137149del, NC_000013.10:g.96137142_96137149del, NC_000013.10:g.96137143_96137149del, NC_000013.10:g.96137144_96137149del, NC_000013.10:g.96137145_96137149del, NC_000013.10:g.96137146_96137149del, NC_000013.10:g.96137147_96137149del, NC_000013.10:g.96137148_96137149del, NC_000013.10:g.96137149del, NC_000013.10:g.96137149dup, NC_000013.10:g.96137148_96137149dup, NC_000013.10:g.96137147_96137149dup, NC_000013.10:g.96137146_96137149dup, NC_000013.10:g.96137145_96137149dup, NC_000013.10:g.96137144_96137149dup, NC_000013.10:g.96137143_96137149dup, NC_000013.10:g.96137142_96137149dup, NC_000013.10:g.96137149_96137150insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NG_047100.1:g.56276_56297del, NG_047100.1:g.56278_56297del, NG_047100.1:g.56279_56297del, NG_047100.1:g.56280_56297del, NG_047100.1:g.56281_56297del, NG_047100.1:g.56284_56297del, NG_047100.1:g.56285_56297del, NG_047100.1:g.56286_56297del, NG_047100.1:g.56287_56297del, NG_047100.1:g.56288_56297del, NG_047100.1:g.56289_56297del, NG_047100.1:g.56290_56297del, NG_047100.1:g.56291_56297del, NG_047100.1:g.56292_56297del, NG_047100.1:g.56293_56297del, NG_047100.1:g.56294_56297del, NG_047100.1:g.56295_56297del, NG_047100.1:g.56296_56297del, NG_047100.1:g.56297del, NG_047100.1:g.56297dup, NG_047100.1:g.56296_56297dup, NG_047100.1:g.56295_56297dup, NG_047100.1:g.56294_56297dup, NG_047100.1:g.56293_56297dup, NG_047100.1:g.56292_56297dup, NG_047100.1:g.56291_56297dup, NG_047100.1:g.56290_56297dup, NG_047100.1:g.56297_56298insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Select item 149097290111.

rs1490972901 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:95527803 (GRCh38)
13:96180057 (GRCh37)
Canonical SPDI:: NC_000013.11:95527802:C:T
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.95527803C>T, NC_000013.10:g.96180057C>T, NG_047100.1:g.99205C>T

Select item 149089133212.

rs1490891332 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:95521105 (GRCh38)
13:96173359 (GRCh37)
Canonical SPDI:: NC_000013.11:95521104:A:G
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000023/6 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000013.11:g.95521105A>G, NC_000013.10:g.96173359A>G, NG_047100.1:g.92507A>G

Select item 149082995513.

rs1490829955 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:95511821 (GRCh38)
13:96164075 (GRCh37)
Canonical SPDI:: NC_000013.11:95511820:C:T
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000013.11:g.95511821C>T, NC_000013.10:g.96164075C>T, NG_047100.1:g.83223C>T

Select item 149080413514.

rs1490804135 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:95513838 (GRCh38)
13:96166092 (GRCh37)
Canonical SPDI:: NC_000013.11:95513837:A:G
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.95513838A>G, NC_000013.10:g.96166092A>G, NG_047100.1:g.85240A>G

Select item 149074994915.

rs1490749949 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:95498378 (GRCh38)
13:96150632 (GRCh37)
Canonical SPDI:: NC_000013.11:95498377:A:G
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000013.11:g.95498378A>G, NC_000013.10:g.96150632A>G, NG_047100.1:g.69780A>G

Select item 149072596216.

rs1490725962 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:95484389 (GRCh38)
13:96136643 (GRCh37)
Canonical SPDI:: NC_000013.11:95484388:A:G
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.95484389A>G, NC_000013.10:g.96136643A>G, NG_047100.1:g.55791A>G

Select item 149069160617.

rs1490691606 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 13:95512617 (GRCh38)
13:96164871 (GRCh37)
Canonical SPDI:: NC_000013.11:95512616:A:G,NC_000013.11:95512616:A:T
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
T=0.000546/1 (Korea1K)
HGVS:: NC_000013.11:g.95512617A>G, NC_000013.11:g.95512617A>T, NC_000013.10:g.96164871A>G, NC_000013.10:g.96164871A>T, NG_047100.1:g.84019A>G, NG_047100.1:g.84019A>T

Select item 149065252418.

rs1490652524 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 13:95529480 (GRCh38)
13:96181734 (GRCh37)
Canonical SPDI:: NC_000013.11:95529479:T:G
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.95529480T>G, NC_000013.10:g.96181734T>G, NG_047100.1:g.100882T>G

Select item 149049516819.

rs1490495168 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 13:95506420 (GRCh38)
13:96158674 (GRCh37)
Canonical SPDI:: NC_000013.11:95506419:C:A
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.95506420C>A, NC_000013.10:g.96158674C>A, NG_047100.1:g.77822C>A

Select item 149047748020.

rs1490477480 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:95492179 (GRCh38)
13:96144433 (GRCh37)
Canonical SPDI:: NC_000013.11:95492178:C:T
Gene:: CLDN10 (Varview), CLDN10-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.95492179C>T, NC_000013.10:g.96144433C>T, NG_047100.1:g.63581C>T

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