Links from Gene
Items: 1 to 20 of 1598
2.
rs1491535902 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 3:184010266
(GRCh38)
3:183728054
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184010265:CA:
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview), LOC124909468 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.00346/41
(
ALFA)
-=0.00139/23
(TOMMO)
- HGVS:
4.
rs1491347030 has merged into rs10541470 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAA>-,AA,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAATTTTAGGAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAATTTAGGAAACATTAAAGAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 3:184010277
(GRCh38)
3:183728065
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAATTTTAGGAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:184010266:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAATTTAGGAAACATTAAAGAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview), LOC124909468 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000003.12:g.184010277_184010289del, NC_000003.12:g.184010279_184010289del, NC_000003.12:g.184010280_184010289del, NC_000003.12:g.184010282_184010289del, NC_000003.12:g.184010283_184010289del, NC_000003.12:g.184010284_184010289del, NC_000003.12:g.184010285_184010289del, NC_000003.12:g.184010286_184010289del, NC_000003.12:g.184010287_184010289del, NC_000003.12:g.184010288_184010289del, NC_000003.12:g.184010289del, NC_000003.12:g.184010289dup, NC_000003.12:g.184010288_184010289dup, NC_000003.12:g.184010287_184010289dup, NC_000003.12:g.184010286_184010289dup, NC_000003.12:g.184010285_184010289dup, NC_000003.12:g.184010284_184010289dup, NC_000003.12:g.184010283_184010289dup, NC_000003.12:g.184010289_184010290insAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000003.12:g.184010289_184010290insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000003.12:g.184010267_184010289A[24]TAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000003.12:g.184010267_184010289A[24]T[4]AGGAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000003.12:g.184010267_184010289A[23]TTTAGGAAACATTAAAGAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000003.11:g.183728065_183728077del, NC_000003.11:g.183728067_183728077del, NC_000003.11:g.183728068_183728077del, NC_000003.11:g.183728070_183728077del, NC_000003.11:g.183728071_183728077del, NC_000003.11:g.183728072_183728077del, NC_000003.11:g.183728073_183728077del, NC_000003.11:g.183728074_183728077del, NC_000003.11:g.183728075_183728077del, NC_000003.11:g.183728076_183728077del, NC_000003.11:g.183728077del, NC_000003.11:g.183728077dup, NC_000003.11:g.183728076_183728077dup, NC_000003.11:g.183728075_183728077dup, NC_000003.11:g.183728074_183728077dup, NC_000003.11:g.183728073_183728077dup, NC_000003.11:g.183728072_183728077dup, NC_000003.11:g.183728071_183728077dup, NC_000003.11:g.183728077_183728078insAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000003.11:g.183728077_183728078insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000003.11:g.183728055_183728077A[24]TAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000003.11:g.183728055_183728077A[24]T[4]AGGAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000003.11:g.183728055_183728077A[23]TTTAGGAAACATTAAAGAAAAAAAAAAAAAAAAAAAAAAAAA[1], NG_047115.1:g.12732_12744del, NG_047115.1:g.12734_12744del, NG_047115.1:g.12735_12744del, NG_047115.1:g.12737_12744del, NG_047115.1:g.12738_12744del, NG_047115.1:g.12739_12744del, NG_047115.1:g.12740_12744del, NG_047115.1:g.12741_12744del, NG_047115.1:g.12742_12744del, NG_047115.1:g.12743_12744del, NG_047115.1:g.12744del, NG_047115.1:g.12744dup, NG_047115.1:g.12743_12744dup, NG_047115.1:g.12742_12744dup, NG_047115.1:g.12741_12744dup, NG_047115.1:g.12740_12744dup, NG_047115.1:g.12739_12744dup, NG_047115.1:g.12738_12744dup, NG_047115.1:g.12744_12745insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NG_047115.1:g.12744_12745insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NG_047115.1:g.12722_12744T[29]ATTTTTTTTTTTTTTTTTTTTTTTT[1], NG_047115.1:g.12722_12744T[25]CCTAAAATTTTTTTTTTTTTTTTTTTTTTTT[1], NG_047115.1:g.12722_12744T[25]CTTTAATGTTTCCTAAATTTTTTTTTTTTTTTTTTTTTTT[1]
5.
rs1491174479 has merged into rs55882083 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTT>-,TT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 3:184010806
(GRCh38)
3:183728594
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000003.12:184010798:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview), LOC124909468 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000003.12:g.184010806_184010814del, NC_000003.12:g.184010808_184010814del, NC_000003.12:g.184010811_184010814del, NC_000003.12:g.184010812_184010814del, NC_000003.12:g.184010813_184010814del, NC_000003.12:g.184010814del, NC_000003.12:g.184010814dup, NC_000003.12:g.184010813_184010814dup, NC_000003.12:g.184010812_184010814dup, NC_000003.12:g.184010811_184010814dup, NC_000003.12:g.184010810_184010814dup, NC_000003.12:g.184010803_184010814dup, NC_000003.11:g.183728594_183728602del, NC_000003.11:g.183728596_183728602del, NC_000003.11:g.183728599_183728602del, NC_000003.11:g.183728600_183728602del, NC_000003.11:g.183728601_183728602del, NC_000003.11:g.183728602del, NC_000003.11:g.183728602dup, NC_000003.11:g.183728601_183728602dup, NC_000003.11:g.183728600_183728602dup, NC_000003.11:g.183728599_183728602dup, NC_000003.11:g.183728598_183728602dup, NC_000003.11:g.183728591_183728602dup, NG_047115.1:g.12204_12212del, NG_047115.1:g.12206_12212del, NG_047115.1:g.12209_12212del, NG_047115.1:g.12210_12212del, NG_047115.1:g.12211_12212del, NG_047115.1:g.12212del, NG_047115.1:g.12212dup, NG_047115.1:g.12211_12212dup, NG_047115.1:g.12210_12212dup, NG_047115.1:g.12209_12212dup, NG_047115.1:g.12208_12212dup, NG_047115.1:g.12201_12212dup, NG_083211.1:g.501_509del, NG_083211.1:g.503_509del, NG_083211.1:g.506_509del, NG_083211.1:g.507_509del, NG_083211.1:g.508_509del, NG_083211.1:g.509del, NG_083211.1:g.509dup, NG_083211.1:g.508_509dup, NG_083211.1:g.507_509dup, NG_083211.1:g.506_509dup, NG_083211.1:g.505_509dup, NG_083211.1:g.498_509dup
9.
rs1490621798 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 3:184005215
(GRCh38)
3:183723003
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184005214:A:C
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency
- MAF:
C=0.000014/2
(GnomAD)
- HGVS:
10.
rs1490560550 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,G
[Show Flanks]
- Chromosome:
- 3:184011231
(GRCh38)
3:183729019
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184011230:A:C,NC_000003.12:184011230:A:G
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview), LOC124909468 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
G=0.000019/5
(TOPMED)
G=0.000546/1
(Korea1K)
- HGVS:
11.
rs1488885512 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 3:184005544
(GRCh38)
3:183723332
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184005543:C:G,NC_000003.12:184005543:C:T
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
G=0.000011/3
(TOPMED)
- HGVS:
13.
rs1487674049 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 3:184004580
(GRCh38)
3:183722368
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184004579:T:C
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
14.
rs1486508809 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 3:184010679
(GRCh38)
3:183728467
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184010678:C:T
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview), LOC124909468 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000071/1
(
ALFA)
T=0.000038/10
(TOPMED)
T=0.000057/8
(GnomAD)
- HGVS:
15.
rs1486416274 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:184007370
(GRCh38)
3:183725158
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184007369:A:G
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
G=0.000014/2
(GnomAD)
G=0.000546/1
(Korea1K)
G=0.000684/2
(KOREAN)
- HGVS:
16.
rs1485046044 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 3:184006897
(GRCh38)
3:183724685
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184006896:G:A
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000071/1
(
ALFA)
A=0.000008/2
(TOPMED)
A=0.000014/2
(GnomAD)
- HGVS:
18.
rs1484028906 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:184005400
(GRCh38)
3:183723188
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184005399:A:G
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
19.
rs1483916078 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 3:184006269
(GRCh38)
3:183724057
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184006268:T:C
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000009/1
(GnomAD)
- HGVS:
20.
rs1483233950 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 3:184007278
(GRCh38)
3:183725066
(GRCh37)
- Canonical SPDI:
- NC_000003.12:184007277:C:T
- Gene:
- ABCC5 (Varview), ABCC5-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.00007/1
(
ALFA)
T=0.00028/5
(TOMMO)
- HGVS: