SNP Links for Gene (Select 100847036) - SNP

Links from Gene

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Select item 14874962451.

rs1487496245 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:151567588 (GRCh38)
3:151285376 (GRCh37)
Canonical SPDI:: NC_000003.12:151567587:G:A
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.151567588G>A, NC_000003.11:g.151285376G>A

Select item 14862870082.

rs1486287008 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:151565456 (GRCh38)
3:151283244 (GRCh37)
Canonical SPDI:: NC_000003.12:151565455:C:T
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000003.12:g.151565456C>T, NC_000003.11:g.151283244C>T

Select item 14843225343.

rs1484322534 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 3:151566498 (GRCh38)
3:151284286 (GRCh37)
Canonical SPDI:: NC_000003.12:151566497:T:A
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.151566498T>A, NC_000003.11:g.151284286T>A

Select item 14837185224.

rs1483718522 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:151567704 (GRCh38)
3:151285492 (GRCh37)
Canonical SPDI:: NC_000003.12:151567703:G:A
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.151567704G>A, NC_000003.11:g.151285492G>A

Select item 14833124755.

rs1483312475 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 3:151567844 (GRCh38)
3:151285632 (GRCh37)
Canonical SPDI:: NC_000003.12:151567843:T:G
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.151567844T>G, NC_000003.11:g.151285632T>G

Select item 14827573556.

rs1482757355 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:151565571 (GRCh38)
3:151283359 (GRCh37)
Canonical SPDI:: NC_000003.12:151565570:G:A
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000021/3 (GnomAD)
A=0.000071/1 (TOMMO)
HGVS:: NC_000003.12:g.151565571G>A, NC_000003.11:g.151283359G>A

Select item 14826712667.

rs1482671266 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 3:151566753 (GRCh38)
3:151284541 (GRCh37)
Canonical SPDI:: NC_000003.12:151566752:C:G
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.151566753C>G, NC_000003.11:g.151284541C>G

Select item 14826206858.

rs1482620685 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 3:151565597 (GRCh38)
3:151283385 (GRCh37)
Canonical SPDI:: NC_000003.12:151565596:C:
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.151565597del, NC_000003.11:g.151283385del

Select item 14820864599.

rs1482086459 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 3:151567150 (GRCh38)
3:151284938 (GRCh37)
Canonical SPDI:: NC_000003.12:151567149:C:A
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.151567150C>A, NC_000003.11:g.151284938C>A

Select item 147721653010.

rs1477216530 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 3:151566490 (GRCh38)
3:151284278 (GRCh37)
Canonical SPDI:: NC_000003.12:151566489:CCC:CC
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.151566492del, NC_000003.11:g.151284280del

Select item 147699175711.

rs1476991757 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 3:151566274 (GRCh38)
3:151284062 (GRCh37)
Canonical SPDI:: NC_000003.12:151566273:A:C
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.151566274A>C, NC_000003.11:g.151284062A>C

Select item 147576981612.

rs1475769816 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 3:151565585 (GRCh38)
3:151283373 (GRCh37)
Canonical SPDI:: NC_000003.12:151565584:A:
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000068/18 (TOPMED)
-=0.000071/10 (GnomAD)
HGVS:: NC_000003.12:g.151565585del, NC_000003.11:g.151283373del

Select item 147385896913.

rs1473858969 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:151566534 (GRCh38)
3:151284322 (GRCh37)
Canonical SPDI:: NC_000003.12:151566533:C:T
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000078/11 (GnomAD)
T=0.000083/22 (TOPMED)
HGVS:: NC_000003.12:g.151566534C>T, NC_000003.11:g.151284322C>T

Select item 147380610414.

rs1473806104 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:151566595 (GRCh38)
3:151284383 (GRCh37)
Canonical SPDI:: NC_000003.12:151566594:A:G
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.151566595A>G, NC_000003.11:g.151284383A>G

Select item 147222201515.

rs1472222015 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 3:151567293 (GRCh38)
3:151285081 (GRCh37)
Canonical SPDI:: NC_000003.12:151567292:T:A
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.151567293T>A, NC_000003.11:g.151285081T>A

Select item 146852262616.

rs1468522626 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:151567799 (GRCh38)
3:151285587 (GRCh37)
Canonical SPDI:: NC_000003.12:151567798:G:T
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.151567799G>T, NC_000003.11:g.151285587G>T

Select item 146685615917.

rs1466856159 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:151567093 (GRCh38)
3:151284881 (GRCh37)
Canonical SPDI:: NC_000003.12:151567092:G:T
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
T=0.000223/1 (Estonian)
HGVS:: NC_000003.12:g.151567093G>T, NC_000003.11:g.151284881G>T

Select item 146677922118.

rs1466779221 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:151567986 (GRCh38)
3:151285774 (GRCh37)
Canonical SPDI:: NC_000003.12:151567985:A:G
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.151567986A>G, NC_000003.11:g.151285774A>G

Select item 146458322519.

rs1464583225 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:151565538 (GRCh38)
3:151283326 (GRCh37)
Canonical SPDI:: NC_000003.12:151565537:A:G
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,500B_downstream_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.151565538A>G, NC_000003.11:g.151283326A>G

Select item 146425742620.

rs1464257426 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 3:151566046 (GRCh38)
3:151283834 (GRCh37)
Canonical SPDI:: NC_000003.12:151566045:A:T
Gene:: IGSF10 (Varview), MIR5186 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000164/23 (GnomAD)
HGVS:: NC_000003.12:g.151566046A>T, NC_000003.11:g.151283834A>T

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