SNP Links for Gene (Select 100652865) - SNP

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Select item 14915275371.

rs1491527537 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 13:21314472 (GRCh38)
13:21888611 (GRCh37)
Canonical SPDI:: NC_000013.11:21314469:CTCT:CT
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CTCT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.21314470CT[1], NC_000013.10:g.21888609CT[1]

Select item 14915184322.

rs1491518432 has merged into rs1555247882 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>-,GTGT,GTGTGT,GTGTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGT [Show Flanks]
Chromosome:: 13:21323196 (GRCh38)
13:21897335 (GRCh37)
Canonical SPDI:: NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000013.11:21323183:GTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGTGTGTGTGTGTGTGT=0./0 (ALFA)
-=0.001519/402 (TOPMED)
HGVS:: NC_000013.11:g.21323184GT[6], NC_000013.11:g.21323184GT[8], NC_000013.11:g.21323184GT[9], NC_000013.11:g.21323184GT[11], NC_000013.11:g.21323184GT[12], NC_000013.11:g.21323184GT[13], NC_000013.11:g.21323184GT[14], NC_000013.11:g.21323184GT[15], NC_000013.11:g.21323184GT[16], NC_000013.11:g.21323184GT[17], NC_000013.11:g.21323184GT[18], NC_000013.11:g.21323184GT[19], NC_000013.11:g.21323184GT[20], NC_000013.10:g.21897323GT[6], NC_000013.10:g.21897323GT[8], NC_000013.10:g.21897323GT[9], NC_000013.10:g.21897323GT[11], NC_000013.10:g.21897323GT[12], NC_000013.10:g.21897323GT[13], NC_000013.10:g.21897323GT[14], NC_000013.10:g.21897323GT[15], NC_000013.10:g.21897323GT[16], NC_000013.10:g.21897323GT[17], NC_000013.10:g.21897323GT[18], NC_000013.10:g.21897323GT[19], NC_000013.10:g.21897323GT[20]

Select item 14914482023.

rs1491448202 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GT,GTGTGT,GTGTGTGT [Show Flanks]
Chromosome:: 13:21314470 (GRCh38)
13:21888610 (GRCh37)
Canonical SPDI:: NC_000013.11:21314470:T:TGT,NC_000013.11:21314470:T:TGTGTGT,NC_000013.11:21314470:T:TGTGTGTGT
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGT=0./0 (ALFA)
TGTGTGTG=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.21314471_21314472insGT, NC_000013.11:g.21314472GT[3], NC_000013.11:g.21314472GT[4], NC_000013.10:g.21888610_21888611insGT, NC_000013.10:g.21888611GT[3], NC_000013.10:g.21888611GT[4]

Select item 14914232254.

rs1491423225 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CGTGTGTGTG [Show Flanks]
Chromosome:: 13:21314473 (GRCh38)
13:21888613 (GRCh37)
Canonical SPDI:: NC_000013.11:21314473:GTGTGTGTG:GTGTGTGTGCGTGTGTGTG
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GTGTGTGTGCGTGTGTGTG=0./0 (ALFA)
HGVS:: NC_000013.11:g.21314474_21314482GT[4]GCGTGTGTGTG[1], NC_000013.10:g.21888613_21888621GT[4]GCGTGTGTGTG[1]

Select item 14913344025.

rs1491334402 has merged into rs113329720 [Homo sapiens]

Variant type:: DELINS
Alleles:: AGAGAGAG>-,AG,AGAG,AGAGAG,AGAGAGAGAG,AGAGAGAGAGAG,AGAGAGAGAGAGAG,AGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAG [Show Flanks]
Chromosome:: 13:21323177 (GRCh38)
13:21897316 (GRCh37)
Canonical SPDI:: NC_000013.11:21323162:AGAGAGAGAGAGAGAGAGAGAG:AGAGAGAGAGAGAG,NC_000013.11:21323162:AGAGAGAGAGAGAGAGAGAGAG:AGAGAGAGAGAGAGAG,NC_000013.11:21323162:AGAGAGAGAGAGAGAGAGAGAG:AGAGAGAGAGAGAGAGAG,NC_000013.11:21323162:AGAGAGAGAGAGAGAGAGAGAG:AGAGAGAGAGAGAGAGAGAG,NC_000013.11:21323162:AGAGAGAGAGAGAGAGAGAGAG:AGAGAGAGAGAGAGAGAGAGAGAG,NC_000013.11:21323162:AGAGAGAGAGAGAGAGAGAGAG:AGAGAGAGAGAGAGAGAGAGAGAGAG,NC_000013.11:21323162:AGAGAGAGAGAGAGAGAGAGAG:AGAGAGAGAGAGAGAGAGAGAGAGAGAG,NC_000013.11:21323162:AGAGAGAGAGAGAGAGAGAGAG:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,NC_000013.11:21323162:AGAGAGAGAGAGAGAGAGAGAG:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAGAGAGAGAGAGAG=0./0 (ALFA)
AGAGAGAGAGAG=0.000008/2 (TOPMED)
AG=0.125/5 (GENOME_DK)
AG=0.305/183 (NorthernSweden)
-=0.370208/1854 (1000Genomes)
-=0.391509/83 (Vietnamese)
HGVS:: NC_000013.11:g.21323163AG[7], NC_000013.11:g.21323163AG[8], NC_000013.11:g.21323163AG[9], NC_000013.11:g.21323163AG[10], NC_000013.11:g.21323163AG[12], NC_000013.11:g.21323163AG[13], NC_000013.11:g.21323163AG[14], NC_000013.11:g.21323163AG[15], NC_000013.11:g.21323163AG[17], NC_000013.10:g.21897302AG[7], NC_000013.10:g.21897302AG[8], NC_000013.10:g.21897302AG[9], NC_000013.10:g.21897302AG[10], NC_000013.10:g.21897302AG[12], NC_000013.10:g.21897302AG[13], NC_000013.10:g.21897302AG[14], NC_000013.10:g.21897302AG[15], NC_000013.10:g.21897302AG[17]

Select item 14912552336.

rs1491255233 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->GG
Chromosome:: no mapping
Canonical SPDI:

Select item 14912377857.

rs1491237785 has merged into rs149836651 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGTGTGTGTGTGTGTGTGTG>-,TG,TGTG,TGTGTG,TGTGTGTG,TGTGTGTGTG,TGTGTGTGTGTG,TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG [Show Flanks]
Chromosome:: 13:21314489 (GRCh38)
13:21888628 (GRCh37)
Canonical SPDI:: NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:21314472:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTGTGTGTGTG=0./0 (ALFA)
-=0.2985/1495 (1000Genomes)
HGVS:: NC_000013.11:g.21314473TG[8], NC_000013.11:g.21314473TG[9], NC_000013.11:g.21314473TG[10], NC_000013.11:g.21314473TG[11], NC_000013.11:g.21314473TG[12], NC_000013.11:g.21314473TG[13], NC_000013.11:g.21314473TG[14], NC_000013.11:g.21314473TG[15], NC_000013.11:g.21314473TG[16], NC_000013.11:g.21314473TG[17], NC_000013.11:g.21314473TG[19], NC_000013.11:g.21314473TG[20], NC_000013.11:g.21314473TG[21], NC_000013.11:g.21314473TG[22], NC_000013.11:g.21314473TG[23], NC_000013.11:g.21314473TG[24], NC_000013.11:g.21314473TG[25], NC_000013.11:g.21314473TG[26], NC_000013.11:g.21314473TG[27], NC_000013.11:g.21314473TG[28], NC_000013.11:g.21314473TG[29], NC_000013.10:g.21888612TG[8], NC_000013.10:g.21888612TG[9], NC_000013.10:g.21888612TG[10], NC_000013.10:g.21888612TG[11], NC_000013.10:g.21888612TG[12], NC_000013.10:g.21888612TG[13], NC_000013.10:g.21888612TG[14], NC_000013.10:g.21888612TG[15], NC_000013.10:g.21888612TG[16], NC_000013.10:g.21888612TG[17], NC_000013.10:g.21888612TG[19], NC_000013.10:g.21888612TG[20], NC_000013.10:g.21888612TG[21], NC_000013.10:g.21888612TG[22], NC_000013.10:g.21888612TG[23], NC_000013.10:g.21888612TG[24], NC_000013.10:g.21888612TG[25], NC_000013.10:g.21888612TG[26], NC_000013.10:g.21888612TG[27], NC_000013.10:g.21888612TG[28], NC_000013.10:g.21888612TG[29]

Select item 14910519468.

rs1491051946 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 13:21314508 (GRCh38)
13:21888647 (GRCh37)
Canonical SPDI:: NC_000013.11:21314507:GG:
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.21314508_21314509del, NC_000013.10:g.21888647_21888648del

Select item 14910212719.

rs1491021271 has merged into rs57244112 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA,AAAA,AAAAA,AAAAAA [Show Flanks]
Chromosome:: 13:21310330 (GRCh38)
13:21884469 (GRCh37)
Canonical SPDI:: NC_000013.11:21310317:AAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000013.11:21310317:AAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000013.11:21310317:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000013.11:21310317:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000013.11:21310317:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000013.11:21310317:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
-=0.3059/1532 (1000Genomes)
-=0.3389/202 (NorthernSweden)
HGVS:: NC_000013.11:g.21310330_21310331del, NC_000013.11:g.21310331del, NC_000013.11:g.21310331dup, NC_000013.11:g.21310330_21310331dup, NC_000013.11:g.21310329_21310331dup, NC_000013.11:g.21310328_21310331dup, NC_000013.10:g.21884469_21884470del, NC_000013.10:g.21884470del, NC_000013.10:g.21884470dup, NC_000013.10:g.21884469_21884470dup, NC_000013.10:g.21884468_21884470dup, NC_000013.10:g.21884467_21884470dup

Select item 149100739310.

rs1491007393 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 13:21316951 (GRCh38)
13:21891090 (GRCh37)
Canonical SPDI:: NC_000013.11:21316950:TG:
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000013.11:g.21316951_21316952del, NC_000013.10:g.21891090_21891091del

Select item 149092383511.

rs1490923835 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:21341092 (GRCh38)
13:21915231 (GRCh37)
Canonical SPDI:: NC_000013.11:21341091:A:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.21341092A>G, NC_000013.10:g.21915231A>G

Select item 149090654812.

rs1490906548 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:21308560 (GRCh38)
13:21882699 (GRCh37)
Canonical SPDI:: NC_000013.11:21308559:G:A
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000013.11:g.21308560G>A, NC_000013.10:g.21882699G>A

Select item 149088815513.

rs1490888155 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 13:21341917 (GRCh38)
13:21916056 (GRCh37)
Canonical SPDI:: NC_000013.11:21341916:C:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.21341917C>G, NC_000013.10:g.21916056C>G

Select item 149076201814.

rs1490762018 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 13:21323376 (GRCh38)
13:21897515 (GRCh37)
Canonical SPDI:: NC_000013.11:21323375:C:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000076/20 (TOPMED)
G=0.000078/11 (GnomAD)
HGVS:: NC_000013.11:g.21323376C>G, NC_000013.10:g.21897515C>G

Select item 149064773015.

rs1490647730 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 13:21326794 (GRCh38)
13:21900933 (GRCh37)
Canonical SPDI:: NC_000013.11:21326793:T:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.21326794T>G, NC_000013.10:g.21900933T>G

Select item 149063550216.

rs1490635502 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:21317736 (GRCh38)
13:21891875 (GRCh37)
Canonical SPDI:: NC_000013.11:21317735:T:C
Gene:: GRK6P1 (Varview), MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.21317736T>C, NC_000013.10:g.21891875T>C

Select item 149057745417.

rs1490577454 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:21332156 (GRCh38)
13:21906295 (GRCh37)
Canonical SPDI:: NC_000013.11:21332155:T:C
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.21332156T>C, NC_000013.10:g.21906295T>C

Select item 149056174618.

rs1490561746 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:21333276 (GRCh38)
13:21907415 (GRCh37)
Canonical SPDI:: NC_000013.11:21333275:A:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.21333276A>G, NC_000013.10:g.21907415A>G

Select item 149045408319.

rs1490454083 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCT>- [Show Flanks]
Chromosome:: 13:21344062 (GRCh38)
13:21918201 (GRCh37)
Canonical SPDI:: NC_000013.11:21344053:CTCCTCCTCCT:CTCCTCCT
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: CTCCTCCT=0./0 (ALFA)
-=0.000017/2 (GnomAD)
HGVS:: NC_000013.11:g.21344056CCT[2], NC_000013.10:g.21918195CCT[2]

Select item 149042282920.

rs1490422829 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:21309282 (GRCh38)
13:21883421 (GRCh37)
Canonical SPDI:: NC_000013.11:21309281:G:A
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
HGVS:: NC_000013.11:g.21309282G>A, NC_000013.10:g.21883421G>A

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