SNP Links for Gene (Select 100616119) - SNP

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Select item 14912467621.

rs1491246762 [Homo sapiens]

Variant type:: DEL
Alleles:: AC>- [Show Flanks]
Chromosome:: 11:133898817 (GRCh38)
11:133768712 (GRCh37)
Canonical SPDI:: NC_000011.10:133898816:AC:
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: 3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000026/7 (TOPMED)
HGVS:: NC_000011.10:g.133898817_133898818del, NC_000011.9:g.133768712_133768713del, NM_001277285.4:c.*10251_*10252del, NM_001001873.2:c.*1289_*1290del, NR_024344.1:n.2923_2924del, NM_001001873.1:c.*1290_*1291del

Select item 14909599352.

rs1490959935 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:133898916 (GRCh38)
11:133768811 (GRCh37)
Canonical SPDI:: NC_000011.10:133898915:G:T
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: 3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.133898916G>T, NC_000011.9:g.133768811G>T, NM_001277285.4:c.*10153C>A, NM_001001873.2:c.*1191C>A, NR_024344.1:n.2825C>A, NM_001001873.1:c.*1192C>A

Select item 14909087043.

rs1490908704 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:133898071 (GRCh38)
11:133767966 (GRCh37)
Canonical SPDI:: NC_000011.10:133898070:C:T
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: downstream_transcript_variant,3_prime_UTR_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.133898071C>T, NC_000011.9:g.133767966C>T, NM_001277285.4:c.*10998G>A, NM_001001873.2:c.*2036G>A, NR_024344.1:n.3670G>A, NM_001001873.1:c.*2037G>A

Select item 14887723654.

rs1488772365 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:133899556 (GRCh38)
11:133769451 (GRCh37)
Canonical SPDI:: NC_000011.10:133899555:A:T
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: 3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.133899556A>T, NC_000011.9:g.133769451A>T, NM_001277285.4:c.*9513T>A, NM_001001873.2:c.*551T>A, NR_024344.1:n.2185T>A, NM_001001873.1:c.*552T>A

Select item 14855891675.

rs1485589167 [Homo sapiens]

Variant type:: SNV:
Alleles:: A>C
Chromosome:: no mapping
Canonical SPDI:

Select item 14846087366.

rs1484608736 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:133899306 (GRCh38)
11:133769201 (GRCh37)
Canonical SPDI:: NC_000011.10:133899305:T:C
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: 3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.133899306T>C, NC_000011.9:g.133769201T>C, NM_001277285.4:c.*9763A>G, NM_001001873.2:c.*801A>G, NR_024344.1:n.2435A>G, NM_001001873.1:c.*802A>G

Select item 14845957607.

rs1484595760 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:133900401 (GRCh38)
11:133770296 (GRCh37)
Canonical SPDI:: NC_000011.10:133900400:G:C
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: 3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.133900401G>C, NC_000011.9:g.133770296G>C, NM_001277285.4:c.*8668C>G, NM_001001873.2:c.151C>G, NR_024344.1:n.1340C>G, NM_001001873.1:c.151C>G

Select item 14839855088.

rs1483985508 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:133899266 (GRCh38)
11:133769161 (GRCh37)
Canonical SPDI:: NC_000011.10:133899265:G:A
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000035/1 (TOMMO)
A=0.000036/5 (GnomAD)
HGVS:: NC_000011.10:g.133899266G>A, NC_000011.9:g.133769161G>A, NM_001277285.4:c.*9803C>T, NM_001001873.2:c.*841C>T, NR_024344.1:n.2475C>T, NM_001001873.1:c.*842C>T

Select item 14836182369.

rs1483618236 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:133899934 (GRCh38)
11:133769829 (GRCh37)
Canonical SPDI:: NC_000011.10:133899933:C:G
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.133899934C>G, NC_000011.9:g.133769829C>G, NM_001277285.4:c.*9135G>C, NM_001001873.2:c.*173G>C, NR_024344.1:n.1807G>C, NM_001001873.1:c.*174G>C

Select item 148152401010.

rs1481524010 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:133898984 (GRCh38)
11:133768879 (GRCh37)
Canonical SPDI:: NC_000011.10:133898983:T:G
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.133898984T>G, NC_000011.9:g.133768879T>G, NM_001277285.4:c.*10085A>C, NM_001001873.2:c.*1123A>C, NR_024344.1:n.2757A>C, NM_001001873.1:c.*1124A>C

Select item 148038698011.

rs1480386980 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 11:133899056 (GRCh38)
11:133768951 (GRCh37)
Canonical SPDI:: NC_000011.10:133899055:G:A,NC_000011.10:133899055:G:C,NC_000011.10:133899055:G:T
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000011.10:g.133899056G>A, NC_000011.10:g.133899056G>C, NC_000011.10:g.133899056G>T, NC_000011.9:g.133768951G>A, NC_000011.9:g.133768951G>C, NC_000011.9:g.133768951G>T, NM_001277285.4:c.*10013C>T, NM_001277285.4:c.*10013C>G, NM_001277285.4:c.*10013C>A, NM_001001873.2:c.*1051C>T, NM_001001873.2:c.*1051C>G, NM_001001873.2:c.*1051C>A, NR_024344.1:n.2685C>T, NR_024344.1:n.2685C>G, NR_024344.1:n.2685C>A, NM_001001873.1:c.*1052C>T, NM_001001873.1:c.*1052C>G, NM_001001873.1:c.*1052C>A

Select item 147924170612.

rs1479241706 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:133900130 (GRCh38)
11:133770025 (GRCh37)
Canonical SPDI:: NC_000011.10:133900129:A:C
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000011.10:g.133900130A>C, NC_000011.9:g.133770025A>C, NM_001277285.4:c.*8939T>G, NM_001001873.2:c.422T>G, NR_024344.1:n.1611T>G, NM_001001873.1:c.422T>G

Select item 147831962613.

rs1478319626 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:133898262 (GRCh38)
11:133768157 (GRCh37)
Canonical SPDI:: NC_000011.10:133898261:C:G
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000011.10:g.133898262C>G, NC_000011.9:g.133768157C>G, NM_001277285.4:c.*10807G>C, NM_001001873.2:c.*1845G>C, NR_024344.1:n.3479G>C, NM_001001873.1:c.*1846G>C

Select item 147728521914.

rs1477285219 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:133899094 (GRCh38)
11:133768989 (GRCh37)
Canonical SPDI:: NC_000011.10:133899093:G:A
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.133899094G>A, NC_000011.9:g.133768989G>A, NM_001277285.4:c.*9975C>T, NM_001001873.2:c.*1013C>T, NR_024344.1:n.2647C>T, NM_001001873.1:c.*1014C>T

Select item 147586748515.

rs1475867485 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:133900439 (GRCh38)
11:133770334 (GRCh37)
Canonical SPDI:: NC_000011.10:133900438:G:A,NC_000011.10:133900438:G:C
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.133900439G>A, NC_000011.10:g.133900439G>C, NC_000011.9:g.133770334G>A, NC_000011.9:g.133770334G>C, NM_001277285.4:c.*8630C>T, NM_001277285.4:c.*8630C>G, NM_001001873.2:c.113C>T, NM_001001873.2:c.113C>G, NR_024344.1:n.1302C>T, NR_024344.1:n.1302C>G, NM_001001873.1:c.113C>T, NM_001001873.1:c.113C>G

Select item 147407145916.

rs1474071459 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:133899110 (GRCh38)
11:133769005 (GRCh37)
Canonical SPDI:: NC_000011.10:133899109:T:G
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.000038/10 (TOPMED)
G=0.00005/7 (GnomAD)
HGVS:: NC_000011.10:g.133899110T>G, NC_000011.9:g.133769005T>G, NM_001277285.4:c.*9959A>C, NM_001001873.2:c.*997A>C, NR_024344.1:n.2631A>C, NM_001001873.1:c.*998A>C

Select item 147402989117.

rs1474029891 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:133898479 (GRCh38)
11:133768374 (GRCh37)
Canonical SPDI:: NC_000011.10:133898478:C:T
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.133898479C>T, NC_000011.9:g.133768374C>T, NM_001277285.4:c.*10590G>A, NM_001001873.2:c.*1628G>A, NR_024344.1:n.3262G>A, NM_001001873.1:c.*1629G>A

Select item 147399777718.

rs1473997777 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:133900514 (GRCh38)
11:133770409 (GRCh37)
Canonical SPDI:: NC_000011.10:133900513:C:T
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
HGVS:: NC_000011.10:g.133900514C>T, NC_000011.9:g.133770409C>T, NM_001277285.4:c.*8555G>A, NM_001001873.2:c.38G>A, NR_024344.1:n.1227G>A, NM_001001873.1:c.38G>A

Select item 147302459819.

rs1473024598 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:133900046 (GRCh38)
11:133769941 (GRCh37)
Canonical SPDI:: NC_000011.10:133900045:G:C
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.133900046G>C, NC_000011.9:g.133769941G>C, NM_001277285.4:c.*9023C>G, NM_001001873.2:c.*61C>G, NR_024344.1:n.1695C>G, NM_001001873.1:c.*62C>G

Select item 147204530120.

rs1472045301 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:133899547 (GRCh38)
11:133769442 (GRCh37)
Canonical SPDI:: NC_000011.10:133899546:A:G
Gene:: IGSF9B (Varview), MIR4697 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.133899547A>G, NC_000011.9:g.133769442A>G, NM_001277285.4:c.*9522T>C, NM_001001873.2:c.*560T>C, NR_024344.1:n.2194T>C, NM_001001873.1:c.*561T>C