SNP Links for Gene (Select 100529215) - SNP

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Select item 14915552371.

rs1491555237 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 19:9351267 (GRCh38)
19:9461943 (GRCh37)
Canonical SPDI:: NC_000019.10:9351266:TG:
Gene:: ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00017/2 (ALFA)
-=0.00015/2 (TOMMO)
HGVS:: NC_000019.10:g.9351267_9351268del, NC_000019.9:g.9461943_9461944del

Select item 14915530202.

rs1491553020 [Homo sapiens]

Variant type:: DELINS
Alleles:: TC>- [Show Flanks]
Chromosome:: 19:9377005 (GRCh38)
19:9487681 (GRCh37)
Canonical SPDI:: NC_000019.10:9377000:TCTCTC:TCTC
Gene:: ZNF177 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCTC=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000021/3 (GnomAD)
-=0.000035/1 (TOMMO)
-=0.000546/1 (Korea1K)
HGVS:: NC_000019.10:g.9377001TC[2], NC_000019.9:g.9487677TC[2]

Select item 14915041993.

rs1491504199 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 19:9326131 (GRCh38)
19:9436808 (GRCh37)
Canonical SPDI:: NC_000019.10:9326131:G:GG
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
HGVS:: NC_000019.10:g.9326132dup, NC_000019.9:g.9436808dup

Select item 14914606034.

rs1491460603 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 19:9366287 (GRCh38)
19:9476963 (GRCh37)
Canonical SPDI:: NC_000019.10:9366286:CT:
Gene:: ZNF177 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9366287_9366288del, NC_000019.9:g.9476963_9476964del

Select item 14914369535.

rs1491436953 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 19:9372540 (GRCh38)
19:9483216 (GRCh37)
Canonical SPDI:: NC_000019.10:9372539:CT:
Gene:: ZNF177 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/1 (GnomAD)
HGVS:: NC_000019.10:g.9372540_9372541del, NC_000019.9:g.9483216_9483217del

Select item 14914334186.

rs1491433418 has merged into rs904074002 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTGTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 19:9328358 (GRCh38)
19:9439034 (GRCh37)
Canonical SPDI:: NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9328348:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000019.10:g.9328358_9328372del, NC_000019.10:g.9328359_9328372del, NC_000019.10:g.9328360_9328372del, NC_000019.10:g.9328361_9328372del, NC_000019.10:g.9328362_9328372del, NC_000019.10:g.9328364_9328372del, NC_000019.10:g.9328365_9328372del, NC_000019.10:g.9328366_9328372del, NC_000019.10:g.9328367_9328372del, NC_000019.10:g.9328368_9328372del, NC_000019.10:g.9328369_9328372del, NC_000019.10:g.9328370_9328372del, NC_000019.10:g.9328371_9328372del, NC_000019.10:g.9328372del, NC_000019.10:g.9328372dup, NC_000019.10:g.9328371_9328372dup, NC_000019.10:g.9328370_9328372dup, NC_000019.10:g.9328369_9328372dup, NC_000019.10:g.9328349_9328372T[28]GT[2]TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000019.10:g.9328368_9328372dup, NC_000019.10:g.9328367_9328372dup, NC_000019.10:g.9328366_9328372dup, NC_000019.10:g.9328365_9328372dup, NC_000019.10:g.9328364_9328372dup, NC_000019.10:g.9328363_9328372dup, NC_000019.10:g.9328362_9328372dup, NC_000019.10:g.9328361_9328372dup, NC_000019.10:g.9328360_9328372dup, NC_000019.10:g.9328372_9328373insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.9:g.9439034_9439048del, NC_000019.9:g.9439035_9439048del, NC_000019.9:g.9439036_9439048del, NC_000019.9:g.9439037_9439048del, NC_000019.9:g.9439038_9439048del, NC_000019.9:g.9439040_9439048del, NC_000019.9:g.9439041_9439048del, NC_000019.9:g.9439042_9439048del, NC_000019.9:g.9439043_9439048del, NC_000019.9:g.9439044_9439048del, NC_000019.9:g.9439045_9439048del, NC_000019.9:g.9439046_9439048del, NC_000019.9:g.9439047_9439048del, NC_000019.9:g.9439048del, NC_000019.9:g.9439048dup, NC_000019.9:g.9439047_9439048dup, NC_000019.9:g.9439046_9439048dup, NC_000019.9:g.9439045_9439048dup, NC_000019.9:g.9439025_9439048T[28]GT[2]TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000019.9:g.9439044_9439048dup, NC_000019.9:g.9439043_9439048dup, NC_000019.9:g.9439042_9439048dup, NC_000019.9:g.9439041_9439048dup, NC_000019.9:g.9439040_9439048dup, NC_000019.9:g.9439039_9439048dup, NC_000019.9:g.9439038_9439048dup, NC_000019.9:g.9439037_9439048dup, NC_000019.9:g.9439036_9439048dup, NC_000019.9:g.9439048_9439049insTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 14913775557.

rs1491377555 has merged into rs552808679 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 19:9356943 (GRCh38)
19:9467619 (GRCh37)
Canonical SPDI:: NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:9356929:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
-=0.03674/184 (1000Genomes)
TT=0.375/15 (GENOME_DK)
HGVS:: NC_000019.10:g.9356943_9356953del, NC_000019.10:g.9356944_9356953del, NC_000019.10:g.9356945_9356953del, NC_000019.10:g.9356946_9356953del, NC_000019.10:g.9356947_9356953del, NC_000019.10:g.9356948_9356953del, NC_000019.10:g.9356949_9356953del, NC_000019.10:g.9356950_9356953del, NC_000019.10:g.9356951_9356953del, NC_000019.10:g.9356952_9356953del, NC_000019.10:g.9356953del, NC_000019.10:g.9356953dup, NC_000019.10:g.9356952_9356953dup, NC_000019.10:g.9356951_9356953dup, NC_000019.10:g.9356950_9356953dup, NC_000019.10:g.9356949_9356953dup, NC_000019.10:g.9356948_9356953dup, NC_000019.10:g.9356947_9356953dup, NC_000019.10:g.9356946_9356953dup, NC_000019.10:g.9356945_9356953dup, NC_000019.10:g.9356944_9356953dup, NC_000019.10:g.9356931_9356953dup, NC_000019.10:g.9356953_9356954insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.10:g.9356953_9356954insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.10:g.9356953_9356954insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.10:g.9356953_9356954insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.10:g.9356953_9356954insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.10:g.9356953_9356954insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.9:g.9467619_9467629del, NC_000019.9:g.9467620_9467629del, NC_000019.9:g.9467621_9467629del, NC_000019.9:g.9467622_9467629del, NC_000019.9:g.9467623_9467629del, NC_000019.9:g.9467624_9467629del, NC_000019.9:g.9467625_9467629del, NC_000019.9:g.9467626_9467629del, NC_000019.9:g.9467627_9467629del, NC_000019.9:g.9467628_9467629del, NC_000019.9:g.9467629del, NC_000019.9:g.9467629dup, NC_000019.9:g.9467628_9467629dup, NC_000019.9:g.9467627_9467629dup, NC_000019.9:g.9467626_9467629dup, NC_000019.9:g.9467625_9467629dup, NC_000019.9:g.9467624_9467629dup, NC_000019.9:g.9467623_9467629dup, NC_000019.9:g.9467622_9467629dup, NC_000019.9:g.9467621_9467629dup, NC_000019.9:g.9467620_9467629dup, NC_000019.9:g.9467607_9467629dup, NC_000019.9:g.9467629_9467630insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.9:g.9467629_9467630insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.9:g.9467629_9467630insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.9:g.9467629_9467630insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.9:g.9467629_9467630insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.9:g.9467629_9467630insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 14913630388.

rs1491363038 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->ATTTTTTTATTTTT
Chromosome:: no mapping
Canonical SPDI:

Select item 14913492839.

rs1491349283 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 19:9326131 (GRCh38)
19:9436807 (GRCh37)
Canonical SPDI:: NC_000019.10:9326130:TG:
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00059/7 (ALFA)
HGVS:: NC_000019.10:g.9326131_9326132del, NC_000019.9:g.9436807_9436808del

Select item 149127669310.

rs1491276693 has merged into rs35775585 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 19:9325797 (GRCh38)
19:9436473 (GRCh37)
Canonical SPDI:: NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9325786:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
AA=0.2774/1389 (1000Genomes)
HGVS:: NC_000019.10:g.9325797_9325802del, NC_000019.10:g.9325798_9325802del, NC_000019.10:g.9325799_9325802del, NC_000019.10:g.9325800_9325802del, NC_000019.10:g.9325801_9325802del, NC_000019.10:g.9325802del, NC_000019.10:g.9325802dup, NC_000019.10:g.9325800_9325802dup, NC_000019.10:g.9325799_9325802dup, NC_000019.10:g.9325798_9325802dup, NC_000019.10:g.9325795_9325802dup, NC_000019.9:g.9436473_9436478del, NC_000019.9:g.9436474_9436478del, NC_000019.9:g.9436475_9436478del, NC_000019.9:g.9436476_9436478del, NC_000019.9:g.9436477_9436478del, NC_000019.9:g.9436478del, NC_000019.9:g.9436478dup, NC_000019.9:g.9436476_9436478dup, NC_000019.9:g.9436475_9436478dup, NC_000019.9:g.9436474_9436478dup, NC_000019.9:g.9436471_9436478dup

Select item 149127540711.

rs1491275407 has merged into rs59300029 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 19:9335148 (GRCh38)
19:9445824 (GRCh37)
Canonical SPDI:: NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9335135:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAA=0./0 (ALFA)
AAAAAAAAAA=0.000015/4 (TOPMED)
-=0.418367/246 (NorthernSweden)
AA=0.419529/2101 (1000Genomes)
HGVS:: NC_000019.10:g.9335148_9335153del, NC_000019.10:g.9335149_9335153del, NC_000019.10:g.9335150_9335153del, NC_000019.10:g.9335151_9335153del, NC_000019.10:g.9335152_9335153del, NC_000019.10:g.9335153del, NC_000019.10:g.9335153dup, NC_000019.10:g.9335152_9335153dup, NC_000019.10:g.9335148_9335153dup, NC_000019.10:g.9335147_9335153dup, NC_000019.10:g.9335146_9335153dup, NC_000019.10:g.9335145_9335153dup, NC_000019.10:g.9335144_9335153dup, NC_000019.9:g.9445824_9445829del, NC_000019.9:g.9445825_9445829del, NC_000019.9:g.9445826_9445829del, NC_000019.9:g.9445827_9445829del, NC_000019.9:g.9445828_9445829del, NC_000019.9:g.9445829del, NC_000019.9:g.9445829dup, NC_000019.9:g.9445828_9445829dup, NC_000019.9:g.9445824_9445829dup, NC_000019.9:g.9445823_9445829dup, NC_000019.9:g.9445822_9445829dup, NC_000019.9:g.9445821_9445829dup, NC_000019.9:g.9445820_9445829dup

Select item 149127226912.

rs1491272269 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 19:9340591 (GRCh38)
19:9451268 (GRCh37)
Canonical SPDI:: NC_000019.10:9340591:G:GG
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
G=0.00028/9 (GnomAD)
HGVS:: NC_000019.10:g.9340592dup, NC_000019.9:g.9451268dup

Select item 149124143713.

rs1491241437 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->CTTT
Chromosome:: no mapping
Canonical SPDI:

Select item 149123550914.

rs1491235509 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GCC [Show Flanks]
Chromosome:: 19:9324619 (GRCh38)
19:9435296 (GRCh37)
Canonical SPDI:: NC_000019.10:9324619:CC:CCGCC
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: CCGCC=0./0 (ALFA)
HGVS:: NC_000019.10:g.9324621_9324622insGCC, NC_000019.9:g.9435297_9435298insGCC

Select item 149123444515.

rs1491234445 [Homo sapiens]

Variant type:: DELINS
Alleles:: AC>- [Show Flanks]
Chromosome:: 19:9342493 (GRCh38)
19:9453169 (GRCh37)
Canonical SPDI:: NC_000019.10:9342489:CACAC:CAC
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant,frameshift_variant,3_prime_UTR_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CAC=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9342491AC[1], NC_000019.9:g.9453167AC[1], NM_032497.3:c.1042_1043del, NM_032497.2:c.1042_1043del, NM_001202407.3:c.916_917del, NM_001202407.2:c.916_917del, NM_001202407.1:c.916_917del, NM_001202412.2:c.*863AC[1], NM_001202412.1:c.*863AC[1], NM_001202409.2:c.*863AC[1], NM_001202409.1:c.*863AC[1], NM_001202411.2:c.*863AC[1], NM_001202411.1:c.*863AC[1], NM_001202410.2:c.*863AC[1], NM_001202410.1:c.*863AC[1], NM_001202408.1:c.*863AC[1], NM_001202406.1:c.1234_1235del, NP_115886.1:p.Thr348fs, NP_001189336.1:p.Thr306fs, NP_001189335.1:p.Thr412fs

Select item 149122356716.

rs1491223567 [Homo sapiens]

Variant type:: INS
Alleles:: ->TTTAAG,TTTG,TTTTA,TTTTTTAAG [Show Flanks]
Chromosome:: 19:9351267 (GRCh38)
19:9461944 (GRCh37)
Canonical SPDI:: NC_000019.10:9351267::TTTAAG,NC_000019.10:9351267::TTTG,NC_000019.10:9351267::TTTTA,NC_000019.10:9351267::TTTTTTAAG
Gene:: ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTG=0./0 (ALFA)
TTTG=0.000023/3 (GnomAD)
TTTTA=0.000299/5 (TOMMO)
HGVS:: NC_000019.10:g.9351267_9351268insTTTAAG, NC_000019.10:g.9351267_9351268insTTTG, NC_000019.10:g.9351267_9351268insTTTTA, NC_000019.10:g.9351267_9351268insTTTTTTAAG, NC_000019.9:g.9461943_9461944insTTTAAG, NC_000019.9:g.9461943_9461944insTTTG, NC_000019.9:g.9461943_9461944insTTTTA, NC_000019.9:g.9461943_9461944insTTTTTTAAG

Select item 149122325617.

rs1491223256 [Homo sapiens]

Variant type:: INS
Alleles:: ->TCC [Show Flanks]
Chromosome:: 19:9340553 (GRCh38)
19:9451230 (GRCh37)
Canonical SPDI:: NC_000019.10:9340553::TCC
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TCC=0./0 (ALFA)
HGVS:: NC_000019.10:g.9340553_9340554insTCC, NC_000019.9:g.9451229_9451230insTCC

Select item 149122218818.

rs1491222188 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 19:9377001 (GRCh38)
19:9487678 (GRCh37)
Canonical SPDI:: NC_000019.10:9377001:C:CC
Gene:: ZNF177 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9377002dup, NC_000019.9:g.9487678dup

Select item 149122115119.

rs1491221151 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 19:9325786 (GRCh38)
19:9436462 (GRCh37)
Canonical SPDI:: NC_000019.10:9325785:CA:
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00126/15 (ALFA)
-=0.00216/39 (GnomAD)
HGVS:: NC_000019.10:g.9325786_9325787del, NC_000019.9:g.9436462_9436463del

Select item 149119697820.

rs1491196978 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 19:9342574 (GRCh38)
19:9453251 (GRCh37)
Canonical SPDI:: NC_000019.10:9342574:A:AA
Gene:: ZNF559 (Varview), ZNF559-ZNF177 (Varview)
Functional Consequence:: intron_variant,frameshift_variant,3_prime_UTR_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.9342575dup, NC_000019.9:g.9453251dup, NM_032497.3:c.1124dup, NM_032497.2:c.1124dup, NM_001202407.3:c.998dup, NM_001202407.2:c.998dup, NM_001202407.1:c.998dup, NM_001202412.2:c.*947dup, NM_001202412.1:c.*947dup, NM_001202409.2:c.*947dup, NM_001202409.1:c.*947dup, NM_001202411.2:c.*947dup, NM_001202411.1:c.*947dup, NM_001202410.2:c.*947dup, NM_001202410.1:c.*947dup, NM_001202408.1:c.*947dup, NM_001202406.1:c.1316dup, NP_115886.1:p.His375fs, NP_001189336.1:p.His333fs, NP_001189335.1:p.His439fs

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