SNP Links for Gene (Select 100507173) - SNP

Links from Gene

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Select item 14914964191.

rs1491496419 has merged into rs757457755 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAA>-,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA [Show Flanks]
Chromosome:: 6:27697485 (GRCh38)
6:27665264 (GRCh37)
Canonical SPDI:: NC_000006.12:27697474:AAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000006.12:27697474:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000006.12:27697474:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000006.12:27697474:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:27697474:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000006.12:27697474:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000006.12:27697474:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000006.12:27697474:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA
Gene:: LINC01012 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.0831/308 (TWINSUK)
-=0.0957/369 (ALSPAC)
HGVS:: NC_000006.12:g.27697485_27697492del, NC_000006.12:g.27697489_27697492del, NC_000006.12:g.27697490_27697492del, NC_000006.12:g.27697491_27697492del, NC_000006.12:g.27697492del, NC_000006.12:g.27697492dup, NC_000006.12:g.27697491_27697492dup, NC_000006.12:g.27697490_27697492dup, NC_000006.11:g.27665264_27665271del, NC_000006.11:g.27665268_27665271del, NC_000006.11:g.27665269_27665271del, NC_000006.11:g.27665270_27665271del, NC_000006.11:g.27665271del, NC_000006.11:g.27665271dup, NC_000006.11:g.27665270_27665271dup, NC_000006.11:g.27665269_27665271dup

Select item 14914747392.

rs1491474739 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 6:27697474 (GRCh38)
6:27665253 (GRCh37)
Canonical SPDI:: NC_000006.12:27697473:CA:
Gene:: LINC01012 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000006.12:g.27697474_27697475del, NC_000006.11:g.27665253_27665254del

Select item 14913353213.

rs1491335321 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CT [Show Flanks]
Chromosome:: 6:27693488 (GRCh38)
6:27661268 (GRCh37)
Canonical SPDI:: NC_000006.12:27693488:T:TCT
Gene:: LINC01012 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TCT=0.00624/74 (ALFA)
HGVS:: NC_000006.12:g.27693489_27693490insCT, NC_000006.11:g.27661268_27661269insCT

Select item 14912156484.

rs1491215648 has merged into rs1554142344 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTT>-,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTTT [Show Flanks]
Chromosome:: 6:27697648 (GRCh38)
6:27665427 (GRCh37)
Canonical SPDI:: NC_000006.12:27697636:TTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000006.12:27697636:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000006.12:27697636:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000006.12:27697636:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000006.12:27697636:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000006.12:27697636:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT
Gene:: LINC01012 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
T=0.1/4 (GENOME_DK)
HGVS:: NC_000006.12:g.27697648_27697652del, NC_000006.12:g.27697651_27697652del, NC_000006.12:g.27697652del, NC_000006.12:g.27697652dup, NC_000006.12:g.27697651_27697652dup, NC_000006.12:g.27697649_27697652dup, NC_000006.11:g.27665427_27665431del, NC_000006.11:g.27665430_27665431del, NC_000006.11:g.27665431del, NC_000006.11:g.27665431dup, NC_000006.11:g.27665430_27665431dup, NC_000006.11:g.27665428_27665431dup

Select item 14911486635.

rs1491148663 has merged into rs71546560 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTTTTTTTTTTTTT>-,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 6:27693491 (GRCh38)
6:27661270 (GRCh37)
Canonical SPDI:: NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:27693487:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC01012 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
TTTTTTTTTTTTTTTTTTTTTTTTT=0./0 (GENOME_DK)
TTTTTT=0.0085/5 (NorthernSweden)
-=0.41494/2078 (1000Genomes)
HGVS:: NC_000006.12:g.27693491_27693515del, NC_000006.12:g.27693500_27693515del, NC_000006.12:g.27693501_27693515del, NC_000006.12:g.27693502_27693515del, NC_000006.12:g.27693503_27693515del, NC_000006.12:g.27693504_27693515del, NC_000006.12:g.27693505_27693515del, NC_000006.12:g.27693506_27693515del, NC_000006.12:g.27693507_27693515del, NC_000006.12:g.27693508_27693515del, NC_000006.12:g.27693509_27693515del, NC_000006.12:g.27693510_27693515del, NC_000006.12:g.27693511_27693515del, NC_000006.12:g.27693512_27693515del, NC_000006.12:g.27693513_27693515del, NC_000006.12:g.27693514_27693515del, NC_000006.12:g.27693515del, NC_000006.12:g.27693515dup, NC_000006.12:g.27693514_27693515dup, NC_000006.12:g.27693513_27693515dup, NC_000006.12:g.27693512_27693515dup, NC_000006.12:g.27693511_27693515dup, NC_000006.12:g.27693510_27693515dup, NC_000006.12:g.27693509_27693515dup, NC_000006.12:g.27693508_27693515dup, NC_000006.12:g.27693507_27693515dup, NC_000006.12:g.27693506_27693515dup, NC_000006.12:g.27693505_27693515dup, NC_000006.12:g.27693504_27693515dup, NC_000006.12:g.27693503_27693515dup, NC_000006.12:g.27693501_27693515dup, NC_000006.12:g.27693498_27693515dup, NC_000006.12:g.27693495_27693515dup, NC_000006.11:g.27661270_27661294del, NC_000006.11:g.27661279_27661294del, NC_000006.11:g.27661280_27661294del, NC_000006.11:g.27661281_27661294del, NC_000006.11:g.27661282_27661294del, NC_000006.11:g.27661283_27661294del, NC_000006.11:g.27661284_27661294del, NC_000006.11:g.27661285_27661294del, NC_000006.11:g.27661286_27661294del, NC_000006.11:g.27661287_27661294del, NC_000006.11:g.27661288_27661294del, NC_000006.11:g.27661289_27661294del, NC_000006.11:g.27661290_27661294del, NC_000006.11:g.27661291_27661294del, NC_000006.11:g.27661292_27661294del, NC_000006.11:g.27661293_27661294del, NC_000006.11:g.27661294del, NC_000006.11:g.27661294dup, NC_000006.11:g.27661293_27661294dup, NC_000006.11:g.27661292_27661294dup, NC_000006.11:g.27661291_27661294dup, NC_000006.11:g.27661290_27661294dup, NC_000006.11:g.27661289_27661294dup, NC_000006.11:g.27661288_27661294dup, NC_000006.11:g.27661287_27661294dup, NC_000006.11:g.27661286_27661294dup, NC_000006.11:g.27661285_27661294dup, NC_000006.11:g.27661284_27661294dup, NC_000006.11:g.27661283_27661294dup, NC_000006.11:g.27661282_27661294dup, NC_000006.11:g.27661280_27661294dup, NC_000006.11:g.27661277_27661294dup, NC_000006.11:g.27661274_27661294dup

Select item 14910123746.

rs1491012374 has merged into rs369487890 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAA>-,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 6:27693071 (GRCh38)
6:27660850 (GRCh37)
Canonical SPDI:: NC_000006.12:27693062:AAAAAAAAAAAAAAA:AAAAAAAA,NC_000006.12:27693062:AAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000006.12:27693062:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000006.12:27693062:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000006.12:27693062:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:27693062:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000006.12:27693062:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA
Gene:: LINC01012 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
-=0.125/5 (GENOME_DK)
-=0.16214/812 (1000Genomes)
HGVS:: NC_000006.12:g.27693071_27693077del, NC_000006.12:g.27693075_27693077del, NC_000006.12:g.27693076_27693077del, NC_000006.12:g.27693077del, NC_000006.12:g.27693077dup, NC_000006.12:g.27693076_27693077dup, NC_000006.12:g.27693070_27693077dup, NC_000006.11:g.27660850_27660856del, NC_000006.11:g.27660854_27660856del, NC_000006.11:g.27660855_27660856del, NC_000006.11:g.27660856del, NC_000006.11:g.27660856dup, NC_000006.11:g.27660855_27660856dup, NC_000006.11:g.27660849_27660856dup

Select item 14909269517.

rs1490926951 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 6:27700897 (GRCh38)
6:27668676 (GRCh37)
Canonical SPDI:: NC_000006.12:27700896:C:G,NC_000006.12:27700896:C:T
Gene:: LINC01012 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.27700897C>G, NC_000006.12:g.27700897C>T, NC_000006.11:g.27668676C>G, NC_000006.11:g.27668676C>T

Select item 14908899738.

rs1490889973 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:27700822 (GRCh38)
6:27668601 (GRCh37)
Canonical SPDI:: NC_000006.12:27700821:A:G
Gene:: LINC01012 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000029/4 (GnomAD)
HGVS:: NC_000006.12:g.27700822A>G, NC_000006.11:g.27668601A>G

Select item 14907250349.

rs1490725034 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:27693174 (GRCh38)
6:27660953 (GRCh37)
Canonical SPDI:: NC_000006.12:27693173:C:T
Gene:: LINC01012 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00035/6 (TOMMO)
T=0.01335/39 (KOREAN)
HGVS:: NC_000006.12:g.27693174C>T, NC_000006.11:g.27660953C>T

Select item 149070915810.

rs1490709158 [Homo sapiens]

Variant type:: DEL
Alleles:: CACTC>- [Show Flanks]
Chromosome:: 6:27693029 (GRCh38)
6:27660808 (GRCh37)
Canonical SPDI:: NC_000006.12:27693028:CACTC:
Gene:: LINC01012 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.000142/2 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000006.12:g.27693029_27693033del, NC_000006.11:g.27660808_27660812del

Select item 149054477111.

rs1490544771 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:27692539 (GRCh38)
6:27660318 (GRCh37)
Canonical SPDI:: NC_000006.12:27692538:A:G
Gene:: LINC01012 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.27692539A>G, NC_000006.11:g.27660318A>G

Select item 149045762012.

rs1490457620 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 6:27704416 (GRCh38)
6:27672195 (GRCh37)
Canonical SPDI:: NC_000006.12:27704415:C:
Gene:: LINC01012 (Varview), LOC124901291 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.000094/1 (ALFA)
-=0./0 (GnomAD)
-=0.000008/2 (TOPMED)
-=0.000625/4 (1000Genomes)
HGVS:: NC_000006.12:g.27704416del, NC_000006.11:g.27672195del

Select item 148994344013.

rs1489943440 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:27702857 (GRCh38)
6:27670636 (GRCh37)
Canonical SPDI:: NC_000006.12:27702856:A:C
Gene:: LINC01012 (Varview), LOC124901291 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000045/12 (TOPMED)
C=0.00005/7 (GnomAD)
HGVS:: NC_000006.12:g.27702857A>C, NC_000006.11:g.27670636A>C

Select item 148977274514.

rs1489772745 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCAGGCTGG>- [Show Flanks]
Chromosome:: 6:27697842 (GRCh38)
6:27665621 (GRCh37)
Canonical SPDI:: NC_000006.12:27697838:TGGCCAGGCTGG:TGG
Gene:: LINC01012 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.27697842_27697850del, NC_000006.11:g.27665621_27665629del

Select item 148974343215.

rs1489743432 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:27705839 (GRCh38)
6:27673618 (GRCh37)
Canonical SPDI:: NC_000006.12:27705838:T:A
Gene:: LINC01012 (Varview), LOC124901291 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.0002/1 (ALFA)
A=0.0002/1 (Estonian)
HGVS:: NC_000006.12:g.27705839T>A, NC_000006.11:g.27673618T>A

Select item 148953768016.

rs1489537680 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:27708655 (GRCh38)
6:27676434 (GRCh37)
Canonical SPDI:: NC_000006.12:27708654:G:T
Gene:: LINC01012 (Varview), LOC124901291 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000015/2 (GnomAD)
HGVS:: NC_000006.12:g.27708655G>T, NC_000006.11:g.27676434G>T, NR_038292.1:n.2269G>T

Select item 148943699517.

rs1489436995 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:27709834 (GRCh38)
6:27677613 (GRCh37)
Canonical SPDI:: NC_000006.12:27709833:T:C
Gene:: LINC01012 (Varview), LOC124901291 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.00017/2 (ALFA)
HGVS:: NC_000006.12:g.27709834T>C, NC_000006.11:g.27677613T>C

Select item 148903625818.

rs1489036258 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:27702085 (GRCh38)
6:27669864 (GRCh37)
Canonical SPDI:: NC_000006.12:27702084:A:T
Gene:: LINC01012 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.27702085A>T, NC_000006.11:g.27669864A>T

Select item 148901410219.

rs1489014102 [Homo sapiens]

Variant type:: SNV:
Alleles:: C>A
Chromosome:: no mapping
Canonical SPDI:

Select item 148897405120.

rs1488974051 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 6:27703098 (GRCh38)
6:27670878 (GRCh37)
Canonical SPDI:: NC_000006.12:27703098:CCCCCC:CCCCCCC
Gene:: LINC01012 (Varview), LOC124901291 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCCCC=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000006.12:g.27703104dup, NC_000006.11:g.27670883dup

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