SNP Links for Gene (Select 100506810) - SNP

Links from Gene

Items: 1 to 20 of 2452

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Select item 14915593771.

rs1491559377 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 1:234724099 (GRCh38)
1:234859846 (GRCh37)
Canonical SPDI:: NC_000001.11:234724098:AT:
Gene:: LINC01132 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000417/58 (GnomAD)
HGVS:: NC_000001.11:g.234724099_234724100del, NC_000001.10:g.234859846_234859847del

Select item 14910427532.

rs1491042753 has merged into rs373691042 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>- [Show Flanks]
Chromosome:: 1:234724129 (GRCh38)
1:234859876 (GRCh37)
Canonical SPDI:: NC_000001.11:234724127:AAA:A
Gene:: LINC01132 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.234724129_234724130del, NC_000001.10:g.234859876_234859877del

Select item 14906379513.

rs1490637951 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:234731687 (GRCh38)
1:234867434 (GRCh37)
Canonical SPDI:: NC_000001.11:234731686:A:G
Gene:: LINC01132 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.234731687A>G, NC_000001.10:g.234867434A>G

Select item 14903882604.

rs1490388260 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 1:234730702 (GRCh38)
1:234866449 (GRCh37)
Canonical SPDI:: NC_000001.11:234730701:A:G,NC_000001.11:234730701:A:T
Gene:: LINC01132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.234730702A>G, NC_000001.11:g.234730702A>T, NC_000001.10:g.234866449A>G, NC_000001.10:g.234866449A>T, NR_038856.1:n.2852A>G, NR_038856.1:n.2852A>T

Select item 14903298615.

rs1490329861 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GTGCATACATGT [Show Flanks]
Chromosome:: 1:234723678 (GRCh38)
1:234859426 (GRCh37)
Canonical SPDI:: NC_000001.11:234723678:TGTGTGCATACATGT:TGTGTGCATACATGTGTGCATACATGT
Gene:: LINC01132 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TGTGTGCATACATGTGTGCATACATGT=0./0 (ALFA)
TGTGTGCATACA=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.234723682_234723693dup, NC_000001.10:g.234859429_234859440dup

Select item 14899082266.

rs1489908226 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:234729373 (GRCh38)
1:234865120 (GRCh37)
Canonical SPDI:: NC_000001.11:234729372:C:A
Gene:: LINC01132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.234729373C>A, NC_000001.10:g.234865120C>A, NR_038856.1:n.1523C>A

Select item 14898132647.

rs1489813264 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:234722433 (GRCh38)
1:234858180 (GRCh37)
Canonical SPDI:: NC_000001.11:234722432:C:T
Gene:: LINC01132 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000001.11:g.234722433C>T, NC_000001.10:g.234858180C>T

Select item 14893307158.

rs1489330715 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 1:234722510 (GRCh38)
1:234858257 (GRCh37)
Canonical SPDI:: NC_000001.11:234722509:GGG:GG
Gene:: LINC01132 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.234722512del, NC_000001.10:g.234858259del

Select item 14890377559.

rs1489037755 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:234728976 (GRCh38)
1:234864723 (GRCh37)
Canonical SPDI:: NC_000001.11:234728975:A:G
Gene:: LINC01132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.234728976A>G, NC_000001.10:g.234864723A>G, NR_038856.1:n.1126A>G

Select item 148896658810.

rs1488966588 [Homo sapiens]

Variant type:: DEL
Alleles:: AAGT>- [Show Flanks]
Chromosome:: 1:234729877 (GRCh38)
1:234865624 (GRCh37)
Canonical SPDI:: NC_000001.11:234729876:AAGT:
Gene:: LINC01132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000001.11:g.234729877_234729880del, NC_000001.10:g.234865624_234865627del, NR_038856.1:n.2027_2030del

Select item 148896458511.

rs1488964585 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:234722394 (GRCh38)
1:234858141 (GRCh37)
Canonical SPDI:: NC_000001.11:234722393:A:C
Gene:: LINC01132 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.234722394A>C, NC_000001.10:g.234858141A>C

Select item 148857596312.

rs1488575963 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:234729774 (GRCh38)
1:234865521 (GRCh37)
Canonical SPDI:: NC_000001.11:234729773:C:T
Gene:: LINC01132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.234729774C>T, NC_000001.10:g.234865521C>T, NR_038856.1:n.1924C>T

Select item 148841219513.

rs1488412195 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:234722831 (GRCh38)
1:234858578 (GRCh37)
Canonical SPDI:: NC_000001.11:234722830:C:T
Gene:: LINC01132 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.234722831C>T, NC_000001.10:g.234858578C>T

Select item 148795928914.

rs1487959289 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:234722543 (GRCh38)
1:234858290 (GRCh37)
Canonical SPDI:: NC_000001.11:234722542:G:C
Gene:: LINC01132 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.234722543G>C, NC_000001.10:g.234858290G>C

Select item 148781297915.

rs1487812979 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:234727780 (GRCh38)
1:234863527 (GRCh37)
Canonical SPDI:: NC_000001.11:234727779:C:T
Gene:: LINC01132 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.234727780C>T, NC_000001.10:g.234863527C>T

Select item 148779454016.

rs1487794540 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:234731694 (GRCh38)
1:234867441 (GRCh37)
Canonical SPDI:: NC_000001.11:234731693:T:G
Gene:: LINC01132 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.234731694T>G, NC_000001.10:g.234867441T>G

Select item 148737277717.

rs1487372777 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:234724061 (GRCh38)
1:234859808 (GRCh37)
Canonical SPDI:: NC_000001.11:234724060:G:A
Gene:: LINC01132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.234724061G>A, NC_000001.10:g.234859808G>A, NR_038856.1:n.20G>A

Select item 148697487518.

rs1486974875 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:234722050 (GRCh38)
1:234857797 (GRCh37)
Canonical SPDI:: NC_000001.11:234722049:G:C
Gene:: LINC01132 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.234722050G>C, NC_000001.10:g.234857797G>C

Select item 148672973319.

rs1486729733 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:234728183 (GRCh38)
1:234863930 (GRCh37)
Canonical SPDI:: NC_000001.11:234728182:G:A
Gene:: LINC01132 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.234728183G>A, NC_000001.10:g.234863930G>A, NG_076609.1:g.102G>A

Select item 148649738520.

rs1486497385 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 1:234726708 (GRCh38)
1:234862455 (GRCh37)
Canonical SPDI:: NC_000001.11:234726707:G:A,NC_000001.11:234726707:G:C,NC_000001.11:234726707:G:T
Gene:: LINC01132 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.234726708G>A, NC_000001.11:g.234726708G>C, NC_000001.11:g.234726708G>T, NC_000001.10:g.234862455G>A, NC_000001.10:g.234862455G>C, NC_000001.10:g.234862455G>T

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