Links from Gene
Items: 1 to 20 of 2332
1.
rs1491541118 has merged into rs370040391 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAA>-,A,AA,AAAA,AAAAA
[Show Flanks]
- Chromosome:
- 1:112955266
(GRCh38)
1:113497888
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112955257:AAAAAAAAAAA:AAAAAAAA,NC_000001.11:112955257:AAAAAAAAAAA:AAAAAAAAA,NC_000001.11:112955257:AAAAAAAAAAA:AAAAAAAAAA,NC_000001.11:112955257:AAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:112955257:AAAAAAAAAAA:AAAAAAAAAAAAA
- Gene:
- SLC16A1 (Varview), SLC16A1-AS1 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAA=0.00017/3
(
ALFA)
-=0.038845/10282
(TOPMED)
- HGVS:
NC_000001.11:g.112955266_112955268del, NC_000001.11:g.112955267_112955268del, NC_000001.11:g.112955268del, NC_000001.11:g.112955268dup, NC_000001.11:g.112955267_112955268dup, NC_000001.10:g.113497888_113497890del, NC_000001.10:g.113497889_113497890del, NC_000001.10:g.113497890del, NC_000001.10:g.113497890dup, NC_000001.10:g.113497889_113497890dup, NG_015880.2:g.5669_5671del, NG_015880.2:g.5670_5671del, NG_015880.2:g.5671del, NG_015880.2:g.5671dup, NG_015880.2:g.5670_5671dup, NW_009646196.1:g.45845_45847del, NW_009646196.1:g.45846_45847del, NW_009646196.1:g.45847del, NW_009646196.1:g.45847dup, NW_009646196.1:g.45846_45847dup
2.
rs1491440353 has merged into rs71590528 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 1:112963435
(GRCh38)
1:113506057
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:112963426:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000001.11:g.112963435_112963449del, NC_000001.11:g.112963437_112963449del, NC_000001.11:g.112963438_112963449del, NC_000001.11:g.112963439_112963449del, NC_000001.11:g.112963440_112963449del, NC_000001.11:g.112963441_112963449del, NC_000001.11:g.112963442_112963449del, NC_000001.11:g.112963443_112963449del, NC_000001.11:g.112963444_112963449del, NC_000001.11:g.112963445_112963449del, NC_000001.11:g.112963446_112963449del, NC_000001.11:g.112963447_112963449del, NC_000001.11:g.112963448_112963449del, NC_000001.11:g.112963449del, NC_000001.11:g.112963449dup, NC_000001.11:g.112963448_112963449dup, NC_000001.11:g.112963447_112963449dup, NC_000001.11:g.112963446_112963449dup, NC_000001.11:g.112963427_112963449T[27]GTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000001.11:g.112963445_112963449dup, NC_000001.11:g.112963444_112963449dup, NC_000001.11:g.112963443_112963449dup, NC_000001.11:g.112963442_112963449dup, NC_000001.11:g.112963449_112963450insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.113506057_113506071del, NC_000001.10:g.113506059_113506071del, NC_000001.10:g.113506060_113506071del, NC_000001.10:g.113506061_113506071del, NC_000001.10:g.113506062_113506071del, NC_000001.10:g.113506063_113506071del, NC_000001.10:g.113506064_113506071del, NC_000001.10:g.113506065_113506071del, NC_000001.10:g.113506066_113506071del, NC_000001.10:g.113506067_113506071del, NC_000001.10:g.113506068_113506071del, NC_000001.10:g.113506069_113506071del, NC_000001.10:g.113506070_113506071del, NC_000001.10:g.113506071del, NC_000001.10:g.113506071dup, NC_000001.10:g.113506070_113506071dup, NC_000001.10:g.113506069_113506071dup, NC_000001.10:g.113506068_113506071dup, NC_000001.10:g.113506049_113506071T[27]GTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000001.10:g.113506067_113506071dup, NC_000001.10:g.113506066_113506071dup, NC_000001.10:g.113506065_113506071dup, NC_000001.10:g.113506064_113506071dup, NC_000001.10:g.113506071_113506072insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NW_009646196.1:g.54014_54028del, NW_009646196.1:g.54016_54028del, NW_009646196.1:g.54017_54028del, NW_009646196.1:g.54018_54028del, NW_009646196.1:g.54019_54028del, NW_009646196.1:g.54020_54028del, NW_009646196.1:g.54021_54028del, NW_009646196.1:g.54022_54028del, NW_009646196.1:g.54023_54028del, NW_009646196.1:g.54024_54028del, NW_009646196.1:g.54025_54028del, NW_009646196.1:g.54026_54028del, NW_009646196.1:g.54027_54028del, NW_009646196.1:g.54028del, NW_009646196.1:g.54028dup, NW_009646196.1:g.54027_54028dup, NW_009646196.1:g.54026_54028dup, NW_009646196.1:g.54025_54028dup, NW_009646196.1:g.54006_54028T[27]GTTTTTTTTTTTTTTTTTTTTTTT[1], NW_009646196.1:g.54024_54028dup, NW_009646196.1:g.54023_54028dup, NW_009646196.1:g.54022_54028dup, NW_009646196.1:g.54021_54028dup, NW_009646196.1:g.54028_54029insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
3.
rs1491420893 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GA>-
[Show Flanks]
- Chromosome:
- 1:112955257
(GRCh38)
1:113497879
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112955256:GA:
- Gene:
- SLC16A1 (Varview), SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000058/8
(GnomAD)
- HGVS:
5.
rs1490795280 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 1:112959361
(GRCh38)
1:113501983
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112959360:C:T
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS:
6.
rs1490455312 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A,C
[Show Flanks]
- Chromosome:
- 1:112964297
(GRCh38)
1:113506919
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112964296:T:A,NC_000001.11:112964296:T:C
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- 500B_downstream_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000014/2
(GnomAD)
- HGVS:
7.
rs1490315044 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:112958102
(GRCh38)
1:113500724
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112958101:G:A
- Gene:
- SLC16A1 (Varview), SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000008/2
(TOPMED)
- HGVS:
8.
rs1490279560 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 1:112959104
(GRCh38)
1:113501726
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112959103:G:C
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
9.
rs1490277897 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 1:112963149
(GRCh38)
1:113505771
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112963148:C:A,NC_000001.11:112963148:C:T
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000015/4
(TOPMED)
T=0.000036/5
(GnomAD)
C=0.5/1
(SGDP_PRJ)
- HGVS:
10.
rs1489650142 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,T
[Show Flanks]
- Chromosome:
- 1:112964501
(GRCh38)
1:113507123
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112964500:G:A,NC_000001.11:112964500:G:T
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- 500B_downstream_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000014/2
(GnomAD)
A=0.000064/17
(TOPMED)
- HGVS:
11.
rs1488853429 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 1:112957455
(GRCh38)
1:113500077
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112957454:C:G
- Gene:
- SLC16A1 (Varview), SLC16A1-AS1 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
12.
rs1487979177 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:112956354
(GRCh38)
1:113498976
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112956353:A:G
- Gene:
- SLC16A1 (Varview), SLC16A1-AS1 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
13.
rs1487900255 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:112956721
(GRCh38)
1:113499343
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112956720:G:A
- Gene:
- SLC16A1 (Varview), SLC16A1-AS1 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
A=0.000021/3
(GnomAD)
- HGVS:
14.
rs1487320326 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- T>-
[Show Flanks]
- Chromosome:
- 1:112960499
(GRCh38)
1:113503121
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112960498:T:
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000011/3
(TOPMED)
- HGVS:
15.
rs1487268064 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 1:112959434
(GRCh38)
1:113502056
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112959433:C:G,NC_000001.11:112959433:C:T
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
16.
rs1487100728 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G,T
[Show Flanks]
- Chromosome:
- 1:112963386
(GRCh38)
1:113506008
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112963385:A:G,NC_000001.11:112963385:A:T
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
G=0.000015/4
(TOPMED)
T=0.016085/47
(KOREAN)
- HGVS:
17.
rs1486382762 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 1:112958196
(GRCh38)
1:113500818
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112958195:C:T
- Gene:
- SLC16A1 (Varview), SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000019/5
(TOPMED)
- HGVS:
18.
rs1486377306 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 1:112955918
(GRCh38)
1:113498540
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112955917:C:T
- Gene:
- SLC16A1 (Varview), SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
19.
rs1486327220 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- G>-
[Show Flanks]
- Chromosome:
- 1:112955986
(GRCh38)
1:113498608
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112955985:GGG:GG
- Gene:
- SLC16A1 (Varview), SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
GG=0./0
(
ALFA)
-=0.000011/3
(TOPMED)
- HGVS:
20.
rs1486018465 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:112963723
(GRCh38)
1:113506345
(GRCh37)
- Canonical SPDI:
- NC_000001.11:112963722:G:A
- Gene:
- SLC16A1-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000015/4
(TOPMED)
- HGVS: