Links from Gene
Items: 1 to 20 of 3576
1.
rs1491577742 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->AT,ATAT
[Show Flanks]
- Chromosome:
- 9:129347180
(GRCh38)
9:132109460
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129347180:T:TAT,NC_000009.12:129347180:T:TATAT
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TAT=0.00019/3
(
ALFA)
TA=0.00032/5
(TOMMO)
TA=0.0011/2
(Korea1K)
TA=0.005/3
(NorthernSweden)
- HGVS:
3.
rs1491543209 has merged into rs762400170 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TG>-,TGTG,TGTGTG
[Show Flanks]
- Chromosome:
- 9:129340923
(GRCh38)
9:132103202
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129340912:TGTGTGTGTGTG:TGTGTGTGTG,NC_000009.12:129340912:TGTGTGTGTGTG:TGTGTGTGTGTGTG,NC_000009.12:129340912:TGTGTGTGTGTG:TGTGTGTGTGTGTGTG
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGTGTGTGTGTGTG=0./0
(
ALFA)
- HGVS:
5.
rs1491476640 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GTGTGAGTTGGC
[Show Flanks]
- Chromosome:
- 9:129340651
(GRCh38)
9:132102931
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129340651:GTGTGAGTTGGC:GTGTGAGTTGGCGTGTGAGTTGGC
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GTGTGAGTTGGCGTGTGAGTTGGC=0./0
(
ALFA)
GTGTGAGTTGGC=0.000004/1
(TOPMED)
GTGTGAGTTGGC=0.000019/2
(GnomAD)
- HGVS:
6.
rs1491425656 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->T,TAT,TATAT
[Show Flanks]
- Chromosome:
- 9:129342481
(GRCh38)
9:132104761
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129342481::T,NC_000009.12:129342481::TAT,NC_000009.12:129342481::TATAT
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TATAT=0./0
(
ALFA)
T=0.04364/731
(TOMMO)
T=0.08/48
(NorthernSweden)
- HGVS:
7.
rs1491343918 has merged into rs71385408 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 9:129338469
(GRCh38)
9:132100748
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129338457:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000009.12:g.129338469_129338481del, NC_000009.12:g.129338470_129338481del, NC_000009.12:g.129338471_129338481del, NC_000009.12:g.129338472_129338481del, NC_000009.12:g.129338473_129338481del, NC_000009.12:g.129338474_129338481del, NC_000009.12:g.129338475_129338481del, NC_000009.12:g.129338476_129338481del, NC_000009.12:g.129338477_129338481del, NC_000009.12:g.129338478_129338481del, NC_000009.12:g.129338479_129338481del, NC_000009.12:g.129338480_129338481del, NC_000009.12:g.129338481del, NC_000009.12:g.129338481dup, NC_000009.12:g.129338480_129338481dup, NC_000009.12:g.129338479_129338481dup, NC_000009.12:g.129338478_129338481dup, NC_000009.12:g.129338476_129338481dup, NC_000009.12:g.129338474_129338481dup, NC_000009.11:g.132100748_132100760del, NC_000009.11:g.132100749_132100760del, NC_000009.11:g.132100750_132100760del, NC_000009.11:g.132100751_132100760del, NC_000009.11:g.132100752_132100760del, NC_000009.11:g.132100753_132100760del, NC_000009.11:g.132100754_132100760del, NC_000009.11:g.132100755_132100760del, NC_000009.11:g.132100756_132100760del, NC_000009.11:g.132100757_132100760del, NC_000009.11:g.132100758_132100760del, NC_000009.11:g.132100759_132100760del, NC_000009.11:g.132100760del, NC_000009.11:g.132100760dup, NC_000009.11:g.132100759_132100760dup, NC_000009.11:g.132100758_132100760dup, NC_000009.11:g.132100757_132100760dup, NC_000009.11:g.132100755_132100760dup, NC_000009.11:g.132100753_132100760dup
8.
rs1491240379 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TT>-
[Show Flanks]
- Chromosome:
- 9:129340150
(GRCh38)
9:132102429
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129340149:TT:
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000022/3
(GnomAD)
- HGVS:
9.
rs1491214238 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TT>-
[Show Flanks]
- Chromosome:
- 9:129340912
(GRCh38)
9:132103191
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129340911:TT:
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000007/1
(GnomAD)
- HGVS:
10.
rs1491198645 has merged into rs773774279 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAAAA>-,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 9:129344635
(GRCh38)
9:132106914
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:129344628:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAA=0./0
(
ALFA)
-=0.000015/4
(TOPMED)
- HGVS:
NC_000009.12:g.129344635_129344650del, NC_000009.12:g.129344638_129344650del, NC_000009.12:g.129344639_129344650del, NC_000009.12:g.129344640_129344650del, NC_000009.12:g.129344641_129344650del, NC_000009.12:g.129344643_129344650del, NC_000009.12:g.129344644_129344650del, NC_000009.12:g.129344645_129344650del, NC_000009.12:g.129344646_129344650del, NC_000009.12:g.129344647_129344650del, NC_000009.12:g.129344648_129344650del, NC_000009.12:g.129344649_129344650del, NC_000009.12:g.129344650del, NC_000009.12:g.129344650dup, NC_000009.12:g.129344649_129344650dup, NC_000009.12:g.129344648_129344650dup, NC_000009.12:g.129344647_129344650dup, NC_000009.12:g.129344646_129344650dup, NC_000009.12:g.129344645_129344650dup, NC_000009.12:g.129344644_129344650dup, NC_000009.12:g.129344643_129344650dup, NC_000009.12:g.129344642_129344650dup, NC_000009.12:g.129344641_129344650dup, NC_000009.12:g.129344640_129344650dup, NC_000009.12:g.129344639_129344650dup, NC_000009.12:g.129344638_129344650dup, NC_000009.12:g.129344637_129344650dup, NC_000009.12:g.129344636_129344650dup, NC_000009.12:g.129344635_129344650dup, NC_000009.12:g.129344634_129344650dup, NC_000009.12:g.129344633_129344650dup, NC_000009.12:g.129344632_129344650dup, NC_000009.12:g.129344631_129344650dup, NC_000009.12:g.129344630_129344650dup, NC_000009.12:g.129344650_129344651insAAAAAAAAAAAAAAAAAAAAAAA, NC_000009.12:g.129344650_129344651insAAAAAAAAAAAAAAAAAAAAAAAA, NC_000009.12:g.129344650_129344651insAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000009.12:g.129344650_129344651insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000009.11:g.132106914_132106929del, NC_000009.11:g.132106917_132106929del, NC_000009.11:g.132106918_132106929del, NC_000009.11:g.132106919_132106929del, NC_000009.11:g.132106920_132106929del, NC_000009.11:g.132106922_132106929del, NC_000009.11:g.132106923_132106929del, NC_000009.11:g.132106924_132106929del, NC_000009.11:g.132106925_132106929del, NC_000009.11:g.132106926_132106929del, NC_000009.11:g.132106927_132106929del, NC_000009.11:g.132106928_132106929del, NC_000009.11:g.132106929del, NC_000009.11:g.132106929dup, NC_000009.11:g.132106928_132106929dup, NC_000009.11:g.132106927_132106929dup, NC_000009.11:g.132106926_132106929dup, NC_000009.11:g.132106925_132106929dup, NC_000009.11:g.132106924_132106929dup, NC_000009.11:g.132106923_132106929dup, NC_000009.11:g.132106922_132106929dup, NC_000009.11:g.132106921_132106929dup, NC_000009.11:g.132106920_132106929dup, NC_000009.11:g.132106919_132106929dup, NC_000009.11:g.132106918_132106929dup, NC_000009.11:g.132106917_132106929dup, NC_000009.11:g.132106916_132106929dup, NC_000009.11:g.132106915_132106929dup, NC_000009.11:g.132106914_132106929dup, NC_000009.11:g.132106913_132106929dup, NC_000009.11:g.132106912_132106929dup, NC_000009.11:g.132106911_132106929dup, NC_000009.11:g.132106910_132106929dup, NC_000009.11:g.132106909_132106929dup, NC_000009.11:g.132106929_132106930insAAAAAAAAAAAAAAAAAAAAAAA, NC_000009.11:g.132106929_132106930insAAAAAAAAAAAAAAAAAAAAAAAA, NC_000009.11:g.132106929_132106930insAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000009.11:g.132106929_132106930insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
11.
rs1491031008 has merged into rs34523775 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 9:129342477
(GRCh38)
9:132104756
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129342471:AAAAAAAAAAA:AAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAAAAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAAAAAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000009.12:129342471:AAAAAAAAAAA:AAAAAAAAAAAAAAAAA
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAA=0./0
(
ALFA)
-=0.3035/1520
(1000Genomes)
-=0.4/16
(GENOME_DK)
- HGVS:
NC_000009.12:g.129342477_129342482del, NC_000009.12:g.129342479_129342482del, NC_000009.12:g.129342480_129342482del, NC_000009.12:g.129342481_129342482del, NC_000009.12:g.129342482del, NC_000009.12:g.129342482dup, NC_000009.12:g.129342481_129342482dup, NC_000009.12:g.129342480_129342482dup, NC_000009.12:g.129342479_129342482dup, NC_000009.12:g.129342478_129342482dup, NC_000009.12:g.129342477_129342482dup, NC_000009.11:g.132104756_132104761del, NC_000009.11:g.132104758_132104761del, NC_000009.11:g.132104759_132104761del, NC_000009.11:g.132104760_132104761del, NC_000009.11:g.132104761del, NC_000009.11:g.132104761dup, NC_000009.11:g.132104760_132104761dup, NC_000009.11:g.132104759_132104761dup, NC_000009.11:g.132104758_132104761dup, NC_000009.11:g.132104757_132104761dup, NC_000009.11:g.132104756_132104761dup
12.
rs1490962198 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 9:129341992
(GRCh38)
9:132104271
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129341991:C:T
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000015/4
(TOPMED)
- HGVS:
13.
rs1490689819 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A,C
[Show Flanks]
- Chromosome:
- 9:129341453
(GRCh38)
9:132103732
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129341452:T:A,NC_000009.12:129341452:T:C
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.00804/88
(
ALFA)
A=0.00161/27
(TOMMO)
C=0.00273/5
(Korea1K)
C=0.04701/137
(KOREAN)
- HGVS:
14.
rs1490685483 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 9:129337135
(GRCh38)
9:132099414
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129337134:G:C
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
15.
rs1490523831 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 9:129337672
(GRCh38)
9:132099951
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129337671:G:A,NC_000009.12:129337671:G:C
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000008/2
(TOPMED)
- HGVS:
16.
rs1490200543 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 9:129342404
(GRCh38)
9:132104683
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129342403:G:A
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency
- MAF:
A=0.000007/1
(GnomAD)
- HGVS:
17.
rs1490126969 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>T
[Show Flanks]
- Chromosome:
- 9:129342400
(GRCh38)
9:132104679
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129342399:G:T
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000011/3
(TOPMED)
- HGVS:
18.
rs1490120796 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 9:129342989
(GRCh38)
9:132105268
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129342988:A:G
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0.000071/1
(
ALFA)
G=0.000015/4
(TOPMED)
- HGVS:
19.
rs1489450554 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 9:129336239
(GRCh38)
9:132098518
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129336238:C:T
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
20.
rs1489446776 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 9:129335502
(GRCh38)
9:132097781
(GRCh37)
- Canonical SPDI:
- NC_000009.12:129335501:A:G
- Gene:
- LINC01503 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency
- MAF:
G=0.000007/1
(GnomAD)
- HGVS: