SNP Links for Gene (Select 100505967) - SNP

Links from Gene

Items: 1 to 20 of 6309

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Select item 14908964441.

rs1490896444 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 14:27618851 (GRCh38)
14:28088057 (GRCh37)
Canonical SPDI:: NC_000014.9:27618850:A:T
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000019/5 (TOPMED)
HGVS:: NC_000014.9:g.27618851A>T, NC_000014.8:g.28088057A>T

Select item 14908373142.

rs1490837314 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 14:27634647 (GRCh38)
14:28103853 (GRCh37)
Canonical SPDI:: NC_000014.9:27634646:G:A,NC_000014.9:27634646:G:C
Gene:: MIR3171HG (Varview), MIR3171 (Varview), LINC00645 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.27634647G>A, NC_000014.9:g.27634647G>C, NC_000014.8:g.28103853G>A, NC_000014.8:g.28103853G>C

Select item 14906126123.

rs1490612612 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 14:27626832 (GRCh38)
14:28096038 (GRCh37)
Canonical SPDI:: NC_000014.9:27626831:G:A,NC_000014.9:27626831:G:T
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (GnomAD)
T=0.000008/2 (TOPMED)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000014.9:g.27626832G>A, NC_000014.9:g.27626832G>T, NC_000014.8:g.28096038G>A, NC_000014.8:g.28096038G>T

Select item 14903529164.

rs1490352916 [Homo sapiens]

Variant type:: DELINS
Alleles:: TAA>- [Show Flanks]
Chromosome:: 14:27621248 (GRCh38)
14:28090454 (GRCh37)
Canonical SPDI:: NC_000014.9:27621245:AATAA:AA
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
-=0.000026/7 (TOPMED)
HGVS:: NC_000014.9:g.27621248_27621250del, NC_000014.8:g.28090454_28090456del

Select item 14903275835.

rs1490327583 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 14:27618808 (GRCh38)
14:28088014 (GRCh37)
Canonical SPDI:: NC_000014.9:27618807:C:A,NC_000014.9:27618807:C:T
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000014.9:g.27618808C>A, NC_000014.9:g.27618808C>T, NC_000014.8:g.28088014C>A, NC_000014.8:g.28088014C>T

Select item 14901377386.

rs1490137738 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:27639293 (GRCh38)
14:28108499 (GRCh37)
Canonical SPDI:: NC_000014.9:27639292:G:A
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.27639293G>A, NC_000014.8:g.28108499G>A, NR_039992.2:n.3192G>A, NR_039992.1:n.3192G>A

Select item 14900928277.

rs1490092827 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 14:27636741 (GRCh38)
14:28105947 (GRCh37)
Canonical SPDI:: NC_000014.9:27636740:A:C
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.27636741A>C, NC_000014.8:g.28105947A>C, NR_039992.2:n.640A>C, NR_039992.1:n.640A>C

Select item 14898357298.

rs1489835729 [Homo sapiens]

Variant type:: SNV:
Alleles:: A>-
Chromosome:: no mapping
Canonical SPDI:

Select item 14898103969.

rs1489810396 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 14:27617634 (GRCh38)
14:28086840 (GRCh37)
Canonical SPDI:: NC_000014.9:27617633:G:T
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.27617634G>T, NC_000014.8:g.28086840G>T

Select item 148976086210.

rs1489760862 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:27617055 (GRCh38)
14:28086261 (GRCh37)
Canonical SPDI:: NC_000014.9:27617054:C:A
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000023/6 (TOPMED)
HGVS:: NC_000014.9:g.27617055C>A, NC_000014.8:g.28086261C>A

Select item 148959715811.

rs1489597158 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:27625450 (GRCh38)
14:28094656 (GRCh37)
Canonical SPDI:: NC_000014.9:27625449:C:T
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000014.9:g.27625450C>T, NC_000014.8:g.28094656C>T

Select item 148957361712.

rs1489573617 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:27611725 (GRCh38)
14:28080931 (GRCh37)
Canonical SPDI:: NC_000014.9:27611724:G:A
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.27611725G>A, NC_000014.8:g.28080931G>A

Select item 148950925013.

rs1489509250 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:27624674 (GRCh38)
14:28093880 (GRCh37)
Canonical SPDI:: NC_000014.9:27624673:C:A
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.27624674C>A, NC_000014.8:g.28093880C>A

Select item 148936082414.

rs1489360824 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 14:27636553 (GRCh38)
14:28105759 (GRCh37)
Canonical SPDI:: NC_000014.9:27636552:T:C,NC_000014.9:27636552:T:G
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.27636553T>C, NC_000014.9:g.27636553T>G, NC_000014.8:g.28105759T>C, NC_000014.8:g.28105759T>G, NR_039992.2:n.452T>C, NR_039992.2:n.452T>G, NR_039992.1:n.452T>C, NR_039992.1:n.452T>G

Select item 148930585315.

rs1489305853 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:27617386 (GRCh38)
14:28086592 (GRCh37)
Canonical SPDI:: NC_000014.9:27617385:G:A
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.27617386G>A, NC_000014.8:g.28086592G>A

Select item 148927382416.

rs1489273824 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:27627310 (GRCh38)
14:28096516 (GRCh37)
Canonical SPDI:: NC_000014.9:27627309:G:A
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.27627310G>A, NC_000014.8:g.28096516G>A

Select item 148925504317.

rs1489255043 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 14:27614797 (GRCh38)
14:28084003 (GRCh37)
Canonical SPDI:: NC_000014.9:27614796:C:G
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000019/5 (TOPMED)
HGVS:: NC_000014.9:g.27614797C>G, NC_000014.8:g.28084003C>G

Select item 148863982718.

rs1488639827 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:27625723 (GRCh38)
14:28094929 (GRCh37)
Canonical SPDI:: NC_000014.9:27625722:T:C
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000014.9:g.27625723T>C, NC_000014.8:g.28094929T>C

Select item 148838233919.

rs1488382339 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 14:27637086 (GRCh38)
14:28106292 (GRCh37)
Canonical SPDI:: NC_000014.9:27637085:G:C,NC_000014.9:27637085:G:T
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.27637086G>C, NC_000014.9:g.27637086G>T, NC_000014.8:g.28106292G>C, NC_000014.8:g.28106292G>T, NR_039992.2:n.985G>C, NR_039992.2:n.985G>T, NR_039992.1:n.985G>C, NR_039992.1:n.985G>T

Select item 148769275620.

rs1487692756 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:27620432 (GRCh38)
14:28089638 (GRCh37)
Canonical SPDI:: NC_000014.9:27620431:A:G
Gene:: MIR3171HG (Varview), LINC00645 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.27620432A>G, NC_000014.8:g.28089638A>G

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