SNP Links for Gene (Select 100422870) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 219

<< First< Prev

Page of 11

Next >Last >>

Select item 14903803621.

rs1490380362 has merged into rs1270356076 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>-,CC [Show Flanks]
Chromosome:: 16:14911788 (GRCh38)
16:15005645 (GRCh37)
Canonical SPDI:: NC_000016.10:14911787:CCCCCC:CCCCC,NC_000016.10:14911787:CCCCCC:CCCCCCC
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: downstream_transcript_variant,non_coding_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: CCCCCCC=0./0 (ALFA)
-=0.00002/2 (GnomAD)
HGVS:: NC_000016.10:g.14911793del, NC_000016.10:g.14911793dup, NC_000016.9:g.15005650del, NC_000016.9:g.15005650dup, NT_187607.1:g.875137del, NT_187607.1:g.875137dup, NR_146231.1:n.32del, NR_146231.1:n.32dup

Select item 14892873722.

rs1489287372 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:14911634 (GRCh38)
16:15005491 (GRCh37)
Canonical SPDI:: NC_000016.10:14911633:C:T
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00219/26 (ALFA)
C=0./0 (SGDP_PRJ)
T=0.00297/19 (1000Genomes)
T=0.00314/24 (GnomAD)
HGVS:: NC_000016.10:g.14911634C>T, NC_000016.9:g.15005491C>T, NT_187607.1:g.875291G>A

Select item 14860626213.

rs1486062621 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:14910124 (GRCh38)
16:15003981 (GRCh37)
Canonical SPDI:: NC_000016.10:14910123:G:A
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000024/3 (GnomAD)
HGVS:: NC_000016.10:g.14910124G>A, NC_000016.9:g.15003981G>A, NT_187607.1:g.876801C>T

Select item 14851661964.

rs1485166196 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:14910088 (GRCh38)
16:15003945 (GRCh37)
Canonical SPDI:: NC_000016.10:14910087:T:C
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000016.10:g.14910088T>C, NC_000016.9:g.15003945T>C, NT_187607.1:g.876837A>G

Select item 14816751215.

rs1481675121 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:14910301 (GRCh38)
16:15004158 (GRCh37)
Canonical SPDI:: NC_000016.10:14910300:G:C
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000016.10:g.14910301G>C, NC_000016.9:g.15004158G>C, NT_187607.1:g.876624C>G

Select item 14804736626.

rs1480473662 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:14910099 (GRCh38)
16:15003956 (GRCh37)
Canonical SPDI:: NC_000016.10:14910098:G:C
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.14910099G>C, NC_000016.9:g.15003956G>C, NT_187607.1:g.876826C>G

Select item 14800413787.

rs1480041378 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 16:14909893 (GRCh38)
16:15003750 (GRCh37)
Canonical SPDI:: NC_000016.10:14909892:C:A,NC_000016.10:14909892:C:T
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.14909893C>A, NC_000016.10:g.14909893C>T, NC_000016.9:g.15003750C>A, NC_000016.9:g.15003750C>T, NT_187607.1:g.877032G>T, NT_187607.1:g.877032G>A

Select item 14794926098.

rs1479492609 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:14909900 (GRCh38)
16:15003757 (GRCh37)
Canonical SPDI:: NC_000016.10:14909899:G:A
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.14909900G>A, NC_000016.9:g.15003757G>A, NT_187607.1:g.877025C>T

Select item 14783560059.

rs1478356005 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:14909705 (GRCh38)
16:15003562 (GRCh37)
Canonical SPDI:: NC_000016.10:14909704:G:C
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000016.10:g.14909705G>C, NC_000016.9:g.15003562G>C, NT_187607.1:g.877220C>G

Select item 147638785210.

rs1476387852 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:14911769 (GRCh38)
16:15005626 (GRCh37)
Canonical SPDI:: NC_000016.10:14911768:C:T
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000016.10:g.14911769C>T, NC_000016.9:g.15005626C>T, NT_187607.1:g.875156G>A, NR_146231.1:n.8C>T

Select item 147314462411.

rs1473144624 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 16:14909950 (GRCh38)
16:15003807 (GRCh37)
Canonical SPDI:: NC_000016.10:14909949:G:A,NC_000016.10:14909949:G:C
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000016.10:g.14909950G>A, NC_000016.10:g.14909950G>C, NC_000016.9:g.15003807G>A, NC_000016.9:g.15003807G>C, NT_187607.1:g.876975C>T, NT_187607.1:g.876975C>G

Select item 147126374412.

rs1471263744 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:14910467 (GRCh38)
16:15004324 (GRCh37)
Canonical SPDI:: NC_000016.10:14910466:G:A
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00008/1 (ALFA)
A=0.00069/7 (TOMMO)
A=0.00565/10 (KOREAN)
HGVS:: NC_000016.10:g.14910467G>A, NC_000016.9:g.15004324G>A, NT_187607.1:g.876458C>T

Select item 147013909513.

rs1470139095 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 16:14909874 (GRCh38)
16:15003731 (GRCh37)
Canonical SPDI:: NC_000016.10:14909873:C:G,NC_000016.10:14909873:C:T
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.00071/2 (KOREAN)
HGVS:: NC_000016.10:g.14909874C>G, NC_000016.10:g.14909874C>T, NC_000016.9:g.15003731C>G, NC_000016.9:g.15003731C>T, NT_187607.1:g.877051G>C, NT_187607.1:g.877051G>A

Select item 146926423214.

rs1469264232 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 16:14909952 (GRCh38)
16:15003809 (GRCh37)
Canonical SPDI:: NC_000016.10:14909951:T:G
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000016.10:g.14909952T>G, NC_000016.9:g.15003809T>G, NT_187607.1:g.876973A>C

Select item 146745732215.

rs1467457322 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 16:14909867 (GRCh38)
16:15003724 (GRCh37)
Canonical SPDI:: NC_000016.10:14909866:C:A,NC_000016.10:14909866:C:T
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000306/5 (ALFA)
A=0.000111/15 (GnomAD)
HGVS:: NC_000016.10:g.14909867C>A, NC_000016.10:g.14909867C>T, NC_000016.9:g.15003724C>A, NC_000016.9:g.15003724C>T, NT_187607.1:g.877058G>T, NT_187607.1:g.877058G>A

Select item 146237578816.

rs1462375788 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTGT [Show Flanks]
Chromosome:: 16:14909744 (GRCh38)
16:15003602 (GRCh37)
Canonical SPDI:: NC_000016.10:14909744:T:TCTGT
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: TCTG=0.000016/2 (GnomAD)
TCTG=0.000312/2 (1000Genomes)
HGVS:: NC_000016.10:g.14909745_14909746insCTGT, NC_000016.9:g.15003602_15003603insCTGT, NT_187607.1:g.877180_877181insCAGA

Select item 146131367617.

rs1461313676 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 16:14909989 (GRCh38)
16:15003846 (GRCh37)
Canonical SPDI:: NC_000016.10:14909988:C:G,NC_000016.10:14909988:C:T
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0.00006/1 (ALFA)
T=0.00004/1 (TOMMO)
HGVS:: NC_000016.10:g.14909989C>G, NC_000016.10:g.14909989C>T, NC_000016.9:g.15003846C>G, NC_000016.9:g.15003846C>T, NT_187607.1:g.876936G>C, NT_187607.1:g.876936G>A

Select item 146125015218.

rs1461250152 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:14910177 (GRCh38)
16:15004034 (GRCh37)
Canonical SPDI:: NC_000016.10:14910176:A:G
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000016.10:g.14910177A>G, NC_000016.9:g.15004034A>G, NT_187607.1:g.876748T>C

Select item 146079777719.

rs1460797777 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 16:14910282 (GRCh38)
16:15004139 (GRCh37)
Canonical SPDI:: NC_000016.10:14910281:A:C,NC_000016.10:14910281:A:T
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000016.10:g.14910282A>C, NC_000016.10:g.14910282A>T, NC_000016.9:g.15004139A>C, NC_000016.9:g.15004139A>T, NT_187607.1:g.876643T>G, NT_187607.1:g.876643T>A

Select item 145997255820.

rs1459972558 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 16:14911596 (GRCh38)
16:15005453 (GRCh37)
Canonical SPDI:: NC_000016.10:14911595:G:A,NC_000016.10:14911595:G:T
Gene:: MIR3180-1 (Varview), LOC101927469 (Varview), PKD1P3-NPIPA1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.14911596G>A, NC_000016.10:g.14911596G>T, NC_000016.9:g.15005453G>A, NC_000016.9:g.15005453G>T, NT_187607.1:g.875329C>T, NT_187607.1:g.875329C>A