SNP Links for Gene (Select 100313772) - SNP

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Select item 14874367021.

rs1487436702 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:95063470 (GRCh38)
X:94318469 (GRCh37)
Canonical SPDI:: NC_000023.11:95063469:C:T
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.95063470C>T, NC_000023.10:g.94318469C>T

Select item 14872991562.

rs1487299156 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: X:95063836 (GRCh38)
X:94318835 (GRCh37)
Canonical SPDI:: NC_000023.11:95063835:A:C,NC_000023.11:95063835:A:T
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000008/2 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.95063836A>C, NC_000023.11:g.95063836A>T, NC_000023.10:g.94318835A>C, NC_000023.10:g.94318835A>T

Select item 14859638023.

rs1485963802 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:95064420 (GRCh38)
X:94319419 (GRCh37)
Canonical SPDI:: NC_000023.11:95064419:A:G
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.95064420A>G, NC_000023.10:g.94319419A>G

Select item 14859537744.

rs1485953774 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: X:95064303 (GRCh38)
X:94319302 (GRCh37)
Canonical SPDI:: NC_000023.11:95064302:T:A
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.00017/2 (ALFA)
HGVS:: NC_000023.11:g.95064303T>A, NC_000023.10:g.94319302T>A

Select item 14858131165.

rs1485813116 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: X:95063663 (GRCh38)
X:94318662 (GRCh37)
Canonical SPDI:: NC_000023.11:95063662:A:T
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000023.11:g.95063663A>T, NC_000023.10:g.94318662A>T

Select item 14850248706.

rs1485024870 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:95064229 (GRCh38)
X:94319228 (GRCh37)
Canonical SPDI:: NC_000023.11:95064228:T:C
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.95064229T>C, NC_000023.10:g.94319228T>C

Select item 14830227237.

rs1483022723 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:95063847 (GRCh38)
X:94318846 (GRCh37)
Canonical SPDI:: NC_000023.11:95063846:T:C
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00001/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.95063847T>C, NC_000023.10:g.94318846T>C

Select item 14829790188.

rs1482979018 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: X:95064728 (GRCh38)
X:94319727 (GRCh37)
Canonical SPDI:: NC_000023.11:95064727:C:A
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00003/3 (GnomAD)
HGVS:: NC_000023.11:g.95064728C>A, NC_000023.10:g.94319727C>A

Select item 14815548759.

rs1481554875 has merged into rs1167990817 [Homo sapiens]

Variant type:: DELINS
Alleles:: TATA>-,TA,TATATA [Show Flanks]
Chromosome:: X:95064550 (GRCh38)
X:94319549 (GRCh37)
Canonical SPDI:: NC_000023.11:95064541:TATATATATATA:TATATATA,NC_000023.11:95064541:TATATATATATA:TATATATATA,NC_000023.11:95064541:TATATATATATA:TATATATATATATA
Gene:: MIR548M (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATATATA=0./0 (ALFA)
-=0.000102/27 (TOPMED)
TA=0.00027/3 (TOMMO)
HGVS:: NC_000023.11:g.95064542TA[4], NC_000023.11:g.95064542TA[5], NC_000023.11:g.95064542TA[7], NC_000023.10:g.94319541TA[4], NC_000023.10:g.94319541TA[5], NC_000023.10:g.94319541TA[7]

Select item 148116389210.

rs1481163892 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:95062884 (GRCh38)
X:94317883 (GRCh37)
Canonical SPDI:: NC_000023.11:95062883:A:G
Gene:: MIR548M (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000038/10 (TOPMED)
HGVS:: NC_000023.11:g.95062884A>G, NC_000023.10:g.94317883A>G

Select item 147598653311.

rs1475986533 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:95063959 (GRCh38)
X:94318958 (GRCh37)
Canonical SPDI:: NC_000023.11:95063958:G:A
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000029/3 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000023.11:g.95063959G>A, NC_000023.10:g.94318958G>A

Select item 147558309612.

rs1475583096 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:95063963 (GRCh38)
X:94318962 (GRCh37)
Canonical SPDI:: NC_000023.11:95063962:G:A
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000023.11:g.95063963G>A, NC_000023.10:g.94318962G>A

Select item 147556142113.

rs1475561421 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: X:95062744 (GRCh38)
X:94317743 (GRCh37)
Canonical SPDI:: NC_000023.11:95062743:C:G,NC_000023.11:95062743:C:T
Gene:: MIR548M (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000023.11:g.95062744C>G, NC_000023.11:g.95062744C>T, NC_000023.10:g.94317743C>G, NC_000023.10:g.94317743C>T

Select item 147545582714.

rs1475455827 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:95063779 (GRCh38)
X:94318778 (GRCh37)
Canonical SPDI:: NC_000023.11:95063778:T:G
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.95063779T>G, NC_000023.10:g.94318778T>G

Select item 147540873015.

rs1475408730 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TA [Show Flanks]
Chromosome:: X:95064529 (GRCh38)
X:94319529 (GRCh37)
Canonical SPDI:: NC_000023.11:95064529:ATATATATA:ATATATATATA
Gene:: MIR548M (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: ATATATATATA=0./0 (ALFA)
HGVS:: NC_000023.11:g.95064531TA[5], NC_000023.10:g.94319530TA[5]

Select item 147111233116.

rs1471112331 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: X:95063559 (GRCh38)
X:94318558 (GRCh37)
Canonical SPDI:: NC_000023.11:95063558:A:C
Gene:: MIR548M (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.95063559A>C, NC_000023.10:g.94318558A>C

Select item 146529004317.

rs1465290043 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:95063233 (GRCh38)
X:94318232 (GRCh37)
Canonical SPDI:: NC_000023.11:95063232:T:C
Gene:: MIR548M (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
C=0.000018/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.95063233T>C, NC_000023.10:g.94318232T>C

Select item 146434293718.

rs1464342937 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: X:95063680 (GRCh38)
X:94318679 (GRCh37)
Canonical SPDI:: NC_000023.11:95063679:AAA:AA
Gene:: MIR548M (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
-=0.000026/7 (TOPMED)
-=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.95063682del, NC_000023.10:g.94318681del

Select item 146404427119.

rs1464044271 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: X:95063593 (GRCh38)
X:94318592 (GRCh37)
Canonical SPDI:: NC_000023.11:95063592:A:T
Gene:: MIR548M (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.95063593A>T, NC_000023.10:g.94318592A>T

Select item 146265021020.

rs1462650210 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: X:95065123 (GRCh38)
X:94320122 (GRCh37)
Canonical SPDI:: NC_000023.11:95065122:G:
Gene:: MIR548M (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.95065123del, NC_000023.10:g.94320122del

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