SNP Links for Gene (Select 100132781) - SNP

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Select item 14902439801.

rs1490243980 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 9:96872624 (GRCh38)
9:99634906 (GRCh37)
Canonical SPDI:: NC_000009.12:96872623:G:C,NC_000009.12:96872623:G:T
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: 500B_downstream_variant,genic_upstream_transcript_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.96872624G>C, NC_000009.12:g.96872624G>T, NC_000009.11:g.99634906G>C, NC_000009.11:g.99634906G>T

Select item 14892166582.

rs1489216658 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96869803 (GRCh38)
9:99632085 (GRCh37)
Canonical SPDI:: NC_000009.12:96869802:T:C
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.96869803T>C, NC_000009.11:g.99632085T>C

Select item 14862852543.

rs1486285254 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:96867794 (GRCh38)
9:99630076 (GRCh37)
Canonical SPDI:: NC_000009.12:96867793:G:A
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000009.12:g.96867794G>A, NC_000009.11:g.99630076G>A

Select item 14859260964.

rs1485926096 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:96867355 (GRCh38)
9:99629637 (GRCh37)
Canonical SPDI:: NC_000009.12:96867354:A:G
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.96867355A>G, NC_000009.11:g.99629637A>G

Select item 14856493335.

rs1485649333 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:96867799 (GRCh38)
9:99630081 (GRCh37)
Canonical SPDI:: NC_000009.12:96867798:C:T
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.96867799C>T, NC_000009.11:g.99630081C>T

Select item 14852668186.

rs1485266818 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:96870359 (GRCh38)
9:99632641 (GRCh37)
Canonical SPDI:: NC_000009.12:96870358:C:T
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000009.12:g.96870359C>T, NC_000009.11:g.99632641C>T, NR_038890.1:n.269C>T

Select item 14852048937.

rs1485204893 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:96867321 (GRCh38)
9:99629603 (GRCh37)
Canonical SPDI:: NC_000009.12:96867320:C:T
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.96867321C>T, NC_000009.11:g.99629603C>T

Select item 14848764958.

rs1484876495 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96871789 (GRCh38)
9:99634071 (GRCh37)
Canonical SPDI:: NC_000009.12:96871788:T:C
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.96871789T>C, NC_000009.11:g.99634071T>C, NR_038890.1:n.1699T>C

Select item 14842781809.

rs1484278180 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96868752 (GRCh38)
9:99631034 (GRCh37)
Canonical SPDI:: NC_000009.12:96868751:T:C
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000023/6 (TOPMED)
C=0.000036/5 (GnomAD)
HGVS:: NC_000009.12:g.96868752T>C, NC_000009.11:g.99631034T>C

Select item 148420312110.

rs1484203121 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:96867267 (GRCh38)
9:99629549 (GRCh37)
Canonical SPDI:: NC_000009.12:96867266:T:G
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.96867267T>G, NC_000009.11:g.99629549T>G

Select item 148368207511.

rs1483682075 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:96868905 (GRCh38)
9:99631187 (GRCh37)
Canonical SPDI:: NC_000009.12:96868904:A:T
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.96868905A>T, NC_000009.11:g.99631187A>T, NR_038890.1:n.6A>T

Select item 148364313412.

rs1483643134 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96871864 (GRCh38)
9:99634146 (GRCh37)
Canonical SPDI:: NC_000009.12:96871863:T:C
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000447/2 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000446/2 (Estonian)
HGVS:: NC_000009.12:g.96871864T>C, NC_000009.11:g.99634146T>C, NR_038890.1:n.1774T>C

Select item 148361863213.

rs1483618632 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:96870689 (GRCh38)
9:99632971 (GRCh37)
Canonical SPDI:: NC_000009.12:96870688:A:G
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000009.12:g.96870689A>G, NC_000009.11:g.99632971A>G, NR_038890.1:n.599A>G

Select item 148251014414.

rs1482510144 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:96870929 (GRCh38)
9:99633211 (GRCh37)
Canonical SPDI:: NC_000009.12:96870928:G:A
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000009.12:g.96870929G>A, NC_000009.11:g.99633211G>A, NR_038890.1:n.839G>A

Select item 148224021115.

rs1482240211 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:96870032 (GRCh38)
9:99632314 (GRCh37)
Canonical SPDI:: NC_000009.12:96870031:A:C
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.96870032A>C, NC_000009.11:g.99632314A>C

Select item 148172628916.

rs1481726289 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:96870260 (GRCh38)
9:99632542 (GRCh37)
Canonical SPDI:: NC_000009.12:96870259:T:G
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000009.12:g.96870260T>G, NC_000009.11:g.99632542T>G, NR_038890.1:n.170T>G

Select item 148119159317.

rs1481191593 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:96868404 (GRCh38)
9:99630686 (GRCh37)
Canonical SPDI:: NC_000009.12:96868403:C:T
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.96868404C>T, NC_000009.11:g.99630686C>T

Select item 148073326418.

rs1480733264 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96870887 (GRCh38)
9:99633169 (GRCh37)
Canonical SPDI:: NC_000009.12:96870886:T:C
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000009.12:g.96870887T>C, NC_000009.11:g.99633169T>C, NR_038890.1:n.797T>C

Select item 148053968019.

rs1480539680 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 9:96871492 (GRCh38)
9:99633774 (GRCh37)
Canonical SPDI:: NC_000009.12:96871491:C:
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.96871492del, NC_000009.11:g.99633774del, NR_038890.1:n.1402del

Select item 148041546020.

rs1480415460 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 9:96871404 (GRCh38)
9:99633686 (GRCh37)
Canonical SPDI:: NC_000009.12:96871403:C:G
Gene:: ZNF782 (Varview), LOC100132781 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.96871404C>G, NC_000009.11:g.99633686C>G, NR_038890.1:n.1314C>G

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