SNP Links for Gene (Select 100130548) - SNP

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Links from Gene

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Select item 14908762561.

rs1490876256 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:134054020 (GRCh38)
9:136919142 (GRCh37)
Canonical SPDI:: NC_000009.12:134054019:T:C
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.134054020T>C, NC_000009.11:g.136919142T>C, XM_011519052.3:c.-419A>G, XM_011519052.2:c.-419A>G, XM_011519052.1:c.-419A>G

Select item 14887085772.

rs1488708577 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:134056343 (GRCh38)
9:136921465 (GRCh37)
Canonical SPDI:: NC_000009.12:134056342:T:C
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000094/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.134056343T>C, NC_000009.11:g.136921465T>C, XM_047423904.1:c.-1903A>G

Select item 14886774283.

rs1488677428 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:134054619 (GRCh38)
9:136919741 (GRCh37)
Canonical SPDI:: NC_000009.12:134054618:C:A
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.134054619C>A, NC_000009.11:g.136919741C>A, XM_047423904.1:c.-179G>T

Select item 14882644494.

rs1488264449 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 9:134056778 (GRCh38)
9:136921900 (GRCh37)
Canonical SPDI:: NC_000009.12:134056777:G:A,NC_000009.12:134056777:G:C
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.134056778G>A, NC_000009.12:g.134056778G>C, NC_000009.11:g.136921900G>A, NC_000009.11:g.136921900G>C, XM_047423904.1:c.-2338C>T, XM_047423904.1:c.-2338C>G

Select item 14878221895.

rs1487822189 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:134058532 (GRCh38)
9:136923654 (GRCh37)
Canonical SPDI:: NC_000009.12:134058531:G:A
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.134058532G>A, NC_000009.11:g.136923654G>A, NR_135126.1:n.1839G>A

Select item 14873564526.

rs1487356452 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 9:134053109 (GRCh38)
9:136918231 (GRCh37)
Canonical SPDI:: NC_000009.12:134053108:G:A,NC_000009.12:134053108:G:C
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.134053109G>A, NC_000009.12:g.134053109G>C, NC_000009.11:g.136918231G>A, NC_000009.11:g.136918231G>C

Select item 14872823047.

rs1487282304 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:134055998 (GRCh38)
9:136921120 (GRCh37)
Canonical SPDI:: NC_000009.12:134055997:T:C
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000009.12:g.134055998T>C, NC_000009.11:g.136921120T>C, XM_047423904.1:c.-1558A>G

Select item 14872322508.

rs1487232250 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:134055308 (GRCh38)
9:136920430 (GRCh37)
Canonical SPDI:: NC_000009.12:134055307:A:G
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.134055308A>G, NC_000009.11:g.136920430A>G, XM_047423904.1:c.-868T>C

Select item 14871458659.

rs1487145865 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:134057909 (GRCh38)
9:136923031 (GRCh37)
Canonical SPDI:: NC_000009.12:134057908:G:A
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000023/6 (TOPMED)
A=0.000043/6 (GnomAD)
HGVS:: NC_000009.12:g.134057909G>A, NC_000009.11:g.136923031G>A, NR_135126.1:n.1216G>A

Select item 148700011410.

rs1487000114 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:134052628 (GRCh38)
9:136917750 (GRCh37)
Canonical SPDI:: NC_000009.12:134052627:C:T
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.134052628C>T, NC_000009.11:g.136917750C>T

Select item 148681022711.

rs1486810227 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:134055937 (GRCh38)
9:136921059 (GRCh37)
Canonical SPDI:: NC_000009.12:134055936:A:C
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.134055937A>C, NC_000009.11:g.136921059A>C, XM_047423904.1:c.-1497T>G

Select item 148469258312.

rs1484692583 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:134052988 (GRCh38)
9:136918110 (GRCh37)
Canonical SPDI:: NC_000009.12:134052987:C:T
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.134052988C>T, NC_000009.11:g.136918110C>T

Select item 148397345113.

rs1483973451 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:134057458 (GRCh38)
9:136922580 (GRCh37)
Canonical SPDI:: NC_000009.12:134057457:C:T
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.134057458C>T, NC_000009.11:g.136922580C>T, NR_135126.1:n.765C>T

Select item 148385037914.

rs1483850379 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:134056380 (GRCh38)
9:136921502 (GRCh37)
Canonical SPDI:: NC_000009.12:134056379:C:T
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.5/1 (SGDP_PRJ)
HGVS:: NC_000009.12:g.134056380C>T, NC_000009.11:g.136921502C>T, XM_047423904.1:c.-1940G>A

Select item 148321528715.

rs1483215287 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:134052681 (GRCh38)
9:136917803 (GRCh37)
Canonical SPDI:: NC_000009.12:134052680:G:A
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.134052681G>A, NC_000009.11:g.136917803G>A

Select item 148215173116.

rs1482151731 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 9:134058708 (GRCh38)
9:136923830 (GRCh37)
Canonical SPDI:: NC_000009.12:134058707:C:G
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000034/9 (TOPMED)
G=0.000684/2 (KOREAN)
HGVS:: NC_000009.12:g.134058708C>G, NC_000009.11:g.136923830C>G, NR_135126.1:n.2015C>G

Select item 148072483917.

rs1480724839 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 9:134053203 (GRCh38)
9:136918325 (GRCh37)
Canonical SPDI:: NC_000009.12:134053202:A:
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000029/4 (GnomAD)
HGVS:: NC_000009.12:g.134053203del, NC_000009.11:g.136918325del

Select item 148064112418.

rs1480641124 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:134057612 (GRCh38)
9:136922734 (GRCh37)
Canonical SPDI:: NC_000009.12:134057611:T:C
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000009.12:g.134057612T>C, NC_000009.11:g.136922734T>C, NR_135126.1:n.919T>C

Select item 147831939019.

rs1478319390 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:134054972 (GRCh38)
9:136920094 (GRCh37)
Canonical SPDI:: NC_000009.12:134054971:C:T
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.134054972C>T, NC_000009.11:g.136920094C>T, XM_047423904.1:c.-532G>A

Select item 147773417520.

rs1477734175 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:134058386 (GRCh38)
9:136923508 (GRCh37)
Canonical SPDI:: NC_000009.12:134058385:T:G
Gene:: BRD3 (Varview), LOC100130548 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.134058386T>G, NC_000009.11:g.136923508T>G, NR_135126.1:n.1693T>G

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