SNP Links for Gene (Select 100129620) - SNP

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Select item 14915573871.

rs1491557387 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 1:99141824 (GRCh38)
1:99607381 (GRCh37)
Canonical SPDI:: NC_000001.11:99141824::G
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000073/1 (GnomAD)
HGVS:: NC_000001.11:g.99141824_99141825insG, NC_000001.10:g.99607380_99607381insG

Select item 14914918382.

rs1491491838 has merged into rs537618614 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAGA>-,GA,GAGAGA,GAGAGAGA [Show Flanks]
Chromosome:: 1:99027779 (GRCh38)
1:99493335 (GRCh37)
Canonical SPDI:: NC_000001.11:99027768:GAGAGAGAGAGAGA:GAGAGAGAGA,NC_000001.11:99027768:GAGAGAGAGAGAGA:GAGAGAGAGAGA,NC_000001.11:99027768:GAGAGAGAGAGAGA:GAGAGAGAGAGAGAGA,NC_000001.11:99027768:GAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGA
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAGAGAGAGAGA=0./0 (ALFA)
GA=0.03874/194 (1000Genomes)
HGVS:: NC_000001.11:g.99027769GA[5], NC_000001.11:g.99027769GA[6], NC_000001.11:g.99027769GA[8], NC_000001.11:g.99027769GA[9], NC_000001.10:g.99493325GA[5], NC_000001.10:g.99493325GA[6], NC_000001.10:g.99493325GA[8], NC_000001.10:g.99493325GA[9]

Select item 14914569723.

rs1491456972 has merged into rs34008484 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAA>-,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:99141831 (GRCh38)
1:99607387 (GRCh37)
Canonical SPDI:: NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:99141823:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
-=0.275/11 (GENOME_DK)
A=0.4513/2260 (1000Genomes)
HGVS:: NC_000001.11:g.99141831_99141838del, NC_000001.11:g.99141835_99141838del, NC_000001.11:g.99141836_99141838del, NC_000001.11:g.99141837_99141838del, NC_000001.11:g.99141838del, NC_000001.11:g.99141838dup, NC_000001.11:g.99141837_99141838dup, NC_000001.11:g.99141836_99141838dup, NC_000001.11:g.99141835_99141838dup, NC_000001.11:g.99141832_99141838dup, NC_000001.11:g.99141829_99141838dup, NC_000001.10:g.99607387_99607394del, NC_000001.10:g.99607391_99607394del, NC_000001.10:g.99607392_99607394del, NC_000001.10:g.99607393_99607394del, NC_000001.10:g.99607394del, NC_000001.10:g.99607394dup, NC_000001.10:g.99607393_99607394dup, NC_000001.10:g.99607392_99607394dup, NC_000001.10:g.99607391_99607394dup, NC_000001.10:g.99607388_99607394dup, NC_000001.10:g.99607385_99607394dup

Select item 14914212494.

rs1491421249 [Homo sapiens]

Variant type:: DEL
Alleles:: AC>- [Show Flanks]
Chromosome:: 1:99102092 (GRCh38)
1:99567648 (GRCh37)
Canonical SPDI:: NC_000001.11:99102091:AC:
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000001.11:g.99102092_99102093del, NC_000001.10:g.99567648_99567649del

Select item 14913797575.

rs1491379757 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 1:99034612 (GRCh38)
1:99500168 (GRCh37)
Canonical SPDI:: NC_000001.11:99034611:CT:
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by cluster
HGVS:: NC_000001.11:g.99034612_99034613del, NC_000001.10:g.99500168_99500169del

Select item 14913753966.

rs1491375396 [Homo sapiens]

Variant type:: DEL
Alleles:: GA>- [Show Flanks]
Chromosome:: 1:99088089 (GRCh38)
1:99553645 (GRCh37)
Canonical SPDI:: NC_000001.11:99088088:GA:
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.00021/1 (TOMMO)
HGVS:: NC_000001.11:g.99088089_99088090del, NC_000001.10:g.99553645_99553646del

Select item 14913616137.

rs1491361613 has merged into rs34891713 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA [Show Flanks]
Chromosome:: 1:99088097 (GRCh38)
1:99553653 (GRCh37)
Canonical SPDI:: NC_000001.11:99088089:AAAAAAAAA:AAAAAAA,NC_000001.11:99088089:AAAAAAAAA:AAAAAAAA,NC_000001.11:99088089:AAAAAAAAA:AAAAAAAAAA
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
A=0.075/3 (GENOME_DK)
A=0.1578/608 (ALSPAC)
A=0.158/586 (TWINSUK)
A=0.1723/172 (GoNL)
A=0.1783/893 (1000Genomes)
A=0.1933/116 (NorthernSweden)
HGVS:: NC_000001.11:g.99088097_99088098del, NC_000001.11:g.99088098del, NC_000001.11:g.99088098dup, NC_000001.10:g.99553653_99553654del, NC_000001.10:g.99553654del, NC_000001.10:g.99553654dup

Select item 14913354758.

rs1491335475 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>- [Show Flanks]
Chromosome:: 1:99112042 (GRCh38)
1:99577598 (GRCh37)
Canonical SPDI:: NC_000001.11:99112039:AAAA:AA
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AAAA=0.00017/2 (ALFA)
HGVS:: NC_000001.11:g.99112042_99112043del, NC_000001.10:g.99577598_99577599del

Select item 14912450409.

rs1491245040 has merged into rs1003276607 [Homo sapiens]

Variant type:: DELINS
Alleles:: TATAATTATA>-,TATAATTATATATAATTATA [Show Flanks]
Chromosome:: 1:99111854 (GRCh38)
1:99577410 (GRCh37)
Canonical SPDI:: NC_000001.11:99111841:TATATAATTATATATAATTATA:TATATAATTATA,NC_000001.11:99111841:TATATAATTATATATAATTATA:TATATAATTATATATAATTATATATAATTATA
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATAATTATA=0.00007/1 (ALFA)
HGVS:: NC_000001.11:g.99111844TATAATTATA[1], NC_000001.11:g.99111844TATAATTATA[3], NC_000001.10:g.99577400TATAATTATA[1], NC_000001.10:g.99577400TATAATTATA[3]

Select item 149124104510.

rs1491241045 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>- [Show Flanks]
Chromosome:: 1:99111846 (GRCh38)
1:99577402 (GRCh37)
Canonical SPDI:: NC_000001.11:99111841:TATATA:TATA
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TATA=0./0 (ALFA)
-=0.000067/7 (GnomAD)
HGVS:: NC_000001.11:g.99111842TA[2], NC_000001.10:g.99577398TA[2]

Select item 149109267011.

rs1491092670 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 1:99111841 (GRCh38)
1:99577397 (GRCh37)
Canonical SPDI:: NC_000001.11:99111840:CT:
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00025/3 (ALFA)
HGVS:: NC_000001.11:g.99111841_99111842del, NC_000001.10:g.99577397_99577398del

Select item 149108629012.

rs1491086290 has merged into rs35064860 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT,TTTTT,TTTTTT,TTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 1:99110510 (GRCh38)
1:99576066 (GRCh37)
Canonical SPDI:: NC_000001.11:99110497:TTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000001.11:99110497:TTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:99110497:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:99110497:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:99110497:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:99110497:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:99110497:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTT=0./0 (ALFA)
T=0.25084/150 (NorthernSweden)
T=0.30312/1518 (1000Genomes)
T=0.375/15 (GENOME_DK)
HGVS:: NC_000001.11:g.99110510_99110511del, NC_000001.11:g.99110511del, NC_000001.11:g.99110511dup, NC_000001.11:g.99110510_99110511dup, NC_000001.11:g.99110509_99110511dup, NC_000001.11:g.99110508_99110511dup, NC_000001.11:g.99110511_99110512insTTTTTTTTTTTTTTT, NC_000001.10:g.99576066_99576067del, NC_000001.10:g.99576067del, NC_000001.10:g.99576067dup, NC_000001.10:g.99576066_99576067dup, NC_000001.10:g.99576065_99576067dup, NC_000001.10:g.99576064_99576067dup, NC_000001.10:g.99576067_99576068insTTTTTTTTTTTTTTT

Select item 149108407113.

rs1491084071 has merged into rs10655912 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:99104623 (GRCh38)
1:99570179 (GRCh37)
Canonical SPDI:: NC_000001.11:99104613:AAAAAAAAAAAAAA:AAAAAAAAA,NC_000001.11:99104613:AAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:99104613:AAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:99104613:AAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:99104613:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:99104613:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:99104613:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:99104613:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:99104613:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
AAA=0.038462/23 (NorthernSweden)
-=0.075879/380 (1000Genomes)
AAA=0.099245/368 (TWINSUK)
AAA=0.110535/426 (ALSPAC)
AAA=0.15/6 (GENOME_DK)
HGVS:: NC_000001.11:g.99104623_99104627del, NC_000001.11:g.99104625_99104627del, NC_000001.11:g.99104626_99104627del, NC_000001.11:g.99104627del, NC_000001.11:g.99104627dup, NC_000001.11:g.99104626_99104627dup, NC_000001.11:g.99104625_99104627dup, NC_000001.11:g.99104624_99104627dup, NC_000001.11:g.99104615_99104627dup, NC_000001.10:g.99570179_99570183del, NC_000001.10:g.99570181_99570183del, NC_000001.10:g.99570182_99570183del, NC_000001.10:g.99570183del, NC_000001.10:g.99570183dup, NC_000001.10:g.99570182_99570183dup, NC_000001.10:g.99570181_99570183dup, NC_000001.10:g.99570180_99570183dup, NC_000001.10:g.99570171_99570183dup

Select item 149105286414.

rs1491052864 has merged into rs3077508 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA [Show Flanks]
Chromosome:: 1:99074060 (GRCh38)
1:99539616 (GRCh37)
Canonical SPDI:: NC_000001.11:99074048:AAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:99074048:AAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:99074048:AAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:99074048:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:99074048:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:99074048:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:99074048:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:99074048:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.99074060_99074061del, NC_000001.11:g.99074061del, NC_000001.11:g.99074061dup, NC_000001.11:g.99074060_99074061dup, NC_000001.11:g.99074059_99074061dup, NC_000001.11:g.99074058_99074061dup, NC_000001.11:g.99074057_99074061dup, NC_000001.11:g.99074055_99074061dup, NC_000001.10:g.99539616_99539617del, NC_000001.10:g.99539617del, NC_000001.10:g.99539617dup, NC_000001.10:g.99539616_99539617dup, NC_000001.10:g.99539615_99539617dup, NC_000001.10:g.99539614_99539617dup, NC_000001.10:g.99539613_99539617dup, NC_000001.10:g.99539611_99539617dup

Select item 149102830515.

rs1491028305 has merged into rs59686592 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATATATATATATATATATATATATATATATAT>-,AT,ATAT,ATATAT,ATATATAT,ATATATATAT,ATATATATATAT,ATATATATATATAT,ATATATATATATATAT,ATATATATATATATATAT,ATATATATATATATATATAT,ATATATATATATATATATATAT,ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATATATATATATAT [Show Flanks]
Chromosome:: 1:99003065 (GRCh38)
1:99468621 (GRCh37)
Canonical SPDI:: NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:99003056:ATATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT
Gene:: PLPPR5 (Varview), PLPPR5-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATAT=0./0 (ALFA)
ATATATATATATATATATATAT=0.15/6 (GENOME_DK)
HGVS:: NC_000001.11:g.99003057AT[4], NC_000001.11:g.99003057AT[5], NC_000001.11:g.99003057AT[6], NC_000001.11:g.99003057AT[7], NC_000001.11:g.99003057AT[8], NC_000001.11:g.99003057AT[9], NC_000001.11:g.99003057AT[10], NC_000001.11:g.99003057AT[11], NC_000001.11:g.99003057AT[12], NC_000001.11:g.99003057AT[13], NC_000001.11:g.99003057AT[14], NC_000001.11:g.99003057AT[15], NC_000001.11:g.99003057AT[16], NC_000001.11:g.99003057AT[17], NC_000001.11:g.99003057AT[18], NC_000001.11:g.99003057AT[19], NC_000001.11:g.99003057AT[21], NC_000001.11:g.99003057AT[22], NC_000001.11:g.99003057AT[23], NC_000001.11:g.99003057AT[24], NC_000001.11:g.99003057AT[25], NC_000001.11:g.99003057AT[26], NC_000001.11:g.99003057AT[27], NC_000001.11:g.99003057AT[28], NC_000001.11:g.99003057AT[31], NC_000001.11:g.99003057AT[32], NC_000001.10:g.99468613AT[4], NC_000001.10:g.99468613AT[5], NC_000001.10:g.99468613AT[6], NC_000001.10:g.99468613AT[7], NC_000001.10:g.99468613AT[8], NC_000001.10:g.99468613AT[9], NC_000001.10:g.99468613AT[10], NC_000001.10:g.99468613AT[11], NC_000001.10:g.99468613AT[12], NC_000001.10:g.99468613AT[13], NC_000001.10:g.99468613AT[14], NC_000001.10:g.99468613AT[15], NC_000001.10:g.99468613AT[16], NC_000001.10:g.99468613AT[17], NC_000001.10:g.99468613AT[18], NC_000001.10:g.99468613AT[19], NC_000001.10:g.99468613AT[21], NC_000001.10:g.99468613AT[22], NC_000001.10:g.99468613AT[23], NC_000001.10:g.99468613AT[24], NC_000001.10:g.99468613AT[25], NC_000001.10:g.99468613AT[26], NC_000001.10:g.99468613AT[27], NC_000001.10:g.99468613AT[28], NC_000001.10:g.99468613AT[31], NC_000001.10:g.99468613AT[32]

Select item 149099738616.

rs1490997386 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:99048672 (GRCh38)
1:99514228 (GRCh37)
Canonical SPDI:: NC_000001.11:99048671:G:A
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000177/3 (TOMMO)
HGVS:: NC_000001.11:g.99048672G>A, NC_000001.10:g.99514228G>A

Select item 149098524217.

rs1490985242 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:99102118 (GRCh38)
1:99567674 (GRCh37)
Canonical SPDI:: NC_000001.11:99102117:A:G
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.99102118A>G, NC_000001.10:g.99567674A>G

Select item 149098204418.

rs1490982044 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:99049743 (GRCh38)
1:99515299 (GRCh37)
Canonical SPDI:: NC_000001.11:99049742:C:T
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.99049743C>T, NC_000001.10:g.99515299C>T

Select item 149095468219.

rs1490954682 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:99101235 (GRCh38)
1:99566791 (GRCh37)
Canonical SPDI:: NC_000001.11:99101234:T:A
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.99101235T>A, NC_000001.10:g.99566791T>A

Select item 149095458620.

rs1490954586 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:99064937 (GRCh38)
1:99530493 (GRCh37)
Canonical SPDI:: NC_000001.11:99064936:A:G
Gene:: PLPPR5-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.99064937A>G, NC_000001.10:g.99530493A>G

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