Links from Gene
Items: 1 to 20 of 608
1.
rs1491385272 has merged into rs60078088 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ACACACACACACACAC>-,AC,ACAC,ACACAC,ACACACACAC,ACACACACACAC,ACACACACACACAC,ACACACACACACACACAC,ACACACACACACACACACAC,ACACACACACACACACACACAC,ACACACACACACACACACACACAC,ACACACACACACACACACACACACAC,ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACAC
[Show Flanks]
- Chromosome:
- 9:33954286
(GRCh38)
9:33954284
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:33954269:ACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- 2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACACACAC=0./0
(
ALFA)
-=0./0
(GENOME_DK)
- HGVS:
NC_000009.12:g.33954270AC[8], NC_000009.12:g.33954270AC[9], NC_000009.12:g.33954270AC[10], NC_000009.12:g.33954270AC[11], NC_000009.12:g.33954270AC[13], NC_000009.12:g.33954270AC[14], NC_000009.12:g.33954270AC[15], NC_000009.12:g.33954270AC[17], NC_000009.12:g.33954270AC[18], NC_000009.12:g.33954270AC[19], NC_000009.12:g.33954270AC[20], NC_000009.12:g.33954270AC[21], NC_000009.12:g.33954270AC[22], NC_000009.12:g.33954270AC[23], NC_000009.12:g.33954270AC[24], NC_000009.12:g.33954270AC[25], NC_000009.12:g.33954270AC[26], NC_000009.12:g.33954270AC[27], NC_000009.12:g.33954270AC[28], NC_000009.12:g.33954270AC[29], NC_000009.12:g.33954270AC[30], NC_000009.12:g.33954270AC[31], NC_000009.12:g.33954270AC[32], NC_000009.12:g.33954270AC[33], NC_000009.12:g.33954270AC[34], NC_000009.11:g.33954268AC[8], NC_000009.11:g.33954268AC[9], NC_000009.11:g.33954268AC[10], NC_000009.11:g.33954268AC[11], NC_000009.11:g.33954268AC[13], NC_000009.11:g.33954268AC[14], NC_000009.11:g.33954268AC[15], NC_000009.11:g.33954268AC[17], NC_000009.11:g.33954268AC[18], NC_000009.11:g.33954268AC[19], NC_000009.11:g.33954268AC[20], NC_000009.11:g.33954268AC[21], NC_000009.11:g.33954268AC[22], NC_000009.11:g.33954268AC[23], NC_000009.11:g.33954268AC[24], NC_000009.11:g.33954268AC[25], NC_000009.11:g.33954268AC[26], NC_000009.11:g.33954268AC[27], NC_000009.11:g.33954268AC[28], NC_000009.11:g.33954268AC[29], NC_000009.11:g.33954268AC[30], NC_000009.11:g.33954268AC[31], NC_000009.11:g.33954268AC[32], NC_000009.11:g.33954268AC[33], NC_000009.11:g.33954268AC[34]
3.
rs1491115319 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CA,CACA,CACACA,CACACACA,CACACACACA,CACACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACA
[Show Flanks]
- Chromosome:
- 9:33954265
(GRCh38)
9:33954264
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33954265:A:ACA,NC_000009.12:33954265:A:ACACA,NC_000009.12:33954265:A:ACACACA,NC_000009.12:33954265:A:ACACACACA,NC_000009.12:33954265:A:ACACACACACA,NC_000009.12:33954265:A:ACACACACACACA,NC_000009.12:33954265:A:ACACACACACACACA,NC_000009.12:33954265:A:ACACACACACACACACA,NC_000009.12:33954265:A:ACACACACACACACACACA
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000009.12:g.33954266_33954267insCA, NC_000009.12:g.33954266_33954267insCACA, NC_000009.12:g.33954267CA[3], NC_000009.12:g.33954267CA[4], NC_000009.12:g.33954267CA[5], NC_000009.12:g.33954267CA[6], NC_000009.12:g.33954267CA[7], NC_000009.12:g.33954267CA[8], NC_000009.12:g.33954267CA[9], NC_000009.11:g.33954264_33954265insCA, NC_000009.11:g.33954264_33954265insCACA, NC_000009.11:g.33954265CA[3], NC_000009.11:g.33954265CA[4], NC_000009.11:g.33954265CA[5], NC_000009.11:g.33954265CA[6], NC_000009.11:g.33954265CA[7], NC_000009.11:g.33954265CA[8], NC_000009.11:g.33954265CA[9]
4.
rs1489637416 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 9:33953554
(GRCh38)
9:33953552
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33953553:T:C
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000026/7
(TOPMED)
C=0.000036/5
(GnomAD)
- HGVS:
5.
rs1489600003 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G,T
[Show Flanks]
- Chromosome:
- 9:33953472
(GRCh38)
9:33953470
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33953471:A:G,NC_000009.12:33953471:A:T
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- missense_variant,non_coding_transcript_variant,upstream_transcript_variant,coding_sequence_variant,genic_upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000028/1
(
ALFA)
G=0.000008/2
(TOPMED)
- HGVS:
NC_000009.12:g.33953472A>G, NC_000009.12:g.33953472A>T, NC_000009.11:g.33953470A>G, NC_000009.11:g.33953470A>T, NM_018449.4:c.869T>C, NM_018449.4:c.869T>A, NM_018449.3:c.869T>C, NM_018449.3:c.869T>A, NM_018449.2:c.869T>C, NM_018449.2:c.869T>A, NM_001370066.2:c.755T>C, NM_001370066.2:c.755T>A, NM_001370066.1:c.755T>C, NM_001370066.1:c.755T>A, NM_020867.2:c.710T>C, NM_020867.2:c.710T>A, NM_020867.1:c.710T>C, NM_020867.1:c.710T>A, NM_001370062.2:c.869T>C, NM_001370062.2:c.869T>A, NM_001370062.1:c.869T>C, NM_001370062.1:c.869T>A, NM_001370059.2:c.869T>C, NM_001370059.2:c.869T>A, NM_001370059.1:c.869T>C, NM_001370059.1:c.869T>A, NM_001370064.2:c.596T>C, NM_001370064.2:c.596T>A, NM_001370064.1:c.596T>C, NM_001370064.1:c.596T>A, NM_001370068.2:c.755T>C, NM_001370068.2:c.755T>A, NM_001370068.1:c.755T>C, NM_001370068.1:c.755T>A, NM_001370067.2:c.710T>C, NM_001370067.2:c.710T>A, NM_001370067.1:c.710T>C, NM_001370067.1:c.710T>A, NR_163243.2:n.606T>C, NR_163243.2:n.606T>A, NR_163243.1:n.606T>C, NR_163243.1:n.606T>A, NM_148171.1:c.801T>C, NM_148171.1:c.801T>A, NM_001282529.1:c.68T>C, NM_001282529.1:c.68T>A, NP_060919.4:p.Ile290Thr, NP_060919.4:p.Ile290Asn, NP_001356995.2:p.Ile252Thr, NP_001356995.2:p.Ile252Asn, NP_001356991.2:p.Ile290Thr, NP_001356991.2:p.Ile290Asn, NP_001356988.2:p.Ile290Thr, NP_001356988.2:p.Ile290Asn, NP_001356993.2:p.Ile199Thr, NP_001356993.2:p.Ile199Asn, NP_001356997.2:p.Ile252Thr, NP_001356997.2:p.Ile252Asn, NP_001356996.2:p.Ile237Thr, NP_001356996.2:p.Ile237Asn
6.
rs1486623669 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 9:33953883
(GRCh38)
9:33953881
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33953882:T:C
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
7.
rs1483350819 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 9:33952909
(GRCh38)
9:33952907
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33952908:A:G
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
G=0.000071/1
(TOMMO)
- HGVS:
8.
rs1482367661 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 9:33952408
(GRCh38)
9:33952406
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33952407:C:T
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- 500B_downstream_variant,genic_upstream_transcript_variant,downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000008/2
(TOPMED)
T=0.000014/2
(GnomAD)
- HGVS:
9.
rs1480279721 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 9:33953886
(GRCh38)
9:33953884
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33953885:A:C
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
- Validated:
- by frequency,by cluster
- MAF:
C=0./0
(KOREAN)
C=0.0005/1
(Korea1K)
- HGVS:
10.
rs1476822112 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 9:33953429
(GRCh38)
9:33953427
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33953428:T:C
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- coding_sequence_variant,genic_upstream_transcript_variant,non_coding_transcript_variant,synonymous_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency
- MAF:
C=0.000004/1
(GnomAD_exomes)
- HGVS:
NC_000009.12:g.33953429T>C, NC_000009.11:g.33953427T>C, NM_018449.4:c.912A>G, NM_018449.3:c.912A>G, NM_018449.2:c.912A>G, NM_001370066.2:c.798A>G, NM_001370066.1:c.798A>G, NM_020867.2:c.753A>G, NM_020867.1:c.753A>G, NM_001370062.2:c.912A>G, NM_001370062.1:c.912A>G, NM_001370059.2:c.912A>G, NM_001370059.1:c.912A>G, NM_001370064.2:c.639A>G, NM_001370064.1:c.639A>G, NM_001370068.2:c.798A>G, NM_001370068.1:c.798A>G, NM_001370067.2:c.753A>G, NM_001370067.1:c.753A>G, NR_163243.2:n.649A>G, NR_163243.1:n.649A>G, NM_148171.1:c.*40A>G, NM_001282529.1:c.111A>G
11.
rs1475782594 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 9:33954331
(GRCh38)
9:33954329
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33954330:A:G
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- 2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000019/5
(TOPMED)
- HGVS:
12.
rs1474509267 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 9:33952400
(GRCh38)
9:33952398
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33952399:T:C
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant,500B_downstream_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000008/2
(TOPMED)
C=0.000021/3
(GnomAD)
- HGVS:
13.
rs1473389759 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 9:33952697
(GRCh38)
9:33952695
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33952696:G:C
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant,500B_downstream_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
- HGVS:
14.
rs1472982088 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->CACAC
[Show Flanks]
- Chromosome:
- 9:33954310
(GRCh38)
9:33954309
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33954310::CACAC
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- 2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
CACAC=0.0002/1
(
ALFA)
CACAC=0.0002/1
(Estonian)
- HGVS:
15.
rs1472856799 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 9:33953021
(GRCh38)
9:33953019
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33953020:C:T
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- 2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
16.
rs1472595334 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 9:33953249
(GRCh38)
9:33953247
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33953248:T:G
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- 2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(GnomAD_exomes)
G=0.000014/2
(GnomAD)
- HGVS:
18.
rs1469477100 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 9:33954065
(GRCh38)
9:33954063
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33954064:C:A
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- 2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
- HGVS:
19.
rs1469427876 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 9:33953037
(GRCh38)
9:33953035
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33953036:T:G
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- 2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
20.
rs1466793285 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,G
[Show Flanks]
- Chromosome:
- 9:33954733
(GRCh38)
9:33954731
(GRCh37)
- Canonical SPDI:
- NC_000009.12:33954732:A:C,NC_000009.12:33954732:A:G
- Gene:
- UBAP2 (Varview), SNORD121A (Varview)
- Functional Consequence:
- 2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000014/2
(GnomAD)
G=0.000015/4
(TOPMED)
- HGVS: