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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs72242969

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr3:179961202-179961230 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
del(GT)7 / del(GT)5 / del(GT)4 / d…

del(GT)7 / del(GT)5 / del(GT)4 / del(GT)3 / delGTGT / delGT / dupGT / dupGTGT / dup(GT)3 / dup(GT)4 / dup(GT)5 / dup(GT)6 / dup(GT)7 / dup(GT)8

Variation Type
Indel Insertion and Deletion
Frequency
delGTGT=0.115811 (30654/264690, TOPMED)
delGTGT=0.01603 (453/28258, 14KJPN)
delGTGT=0.01611 (270/16760, 8.3KJPN) (+ 16 more)
del(GT)7=0.0000 (0/8330, ALFA)
del(GT)4=0.0000 (0/8330, ALFA)
del(GT)3=0.0000 (0/8330, ALFA)
delGTGT=0.0000 (0/8330, ALFA)
delGT=0.0000 (0/8330, ALFA)
dupGT=0.0000 (0/8330, ALFA)
dupGTGT=0.0000 (0/8330, ALFA)
dup(GT)3=0.0000 (0/8330, ALFA)
dup(GT)4=0.0000 (0/8330, ALFA)
dup(GT)5=0.0000 (0/8330, ALFA)
dup(GT)6=0.0000 (0/8330, ALFA)
dup(GT)7=0.0000 (0/8330, ALFA)
dup(GT)8=0.0000 (0/8330, ALFA)
delGTGT=0.0218 (40/1832, Korea1K)
delGTGT=0.213 (128/600, NorthernSweden)
delGTGT=0.12 (5/40, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
PEX5L : Intron Variant
LOC124909463 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 8330 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.0000 TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 1.0 0.0 0.0 N/A
European Sub 5020 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.0000 TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 1.0 0.0 0.0 N/A
African Sub 2152 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.0000 TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 1.0 0.0 0.0 N/A
African Others Sub 84 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
African American Sub 2068 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.0000 TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 1.0 0.0 0.0 N/A
Asian Sub 98 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
East Asian Sub 74 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Other Asian Sub 24 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Latin American 1 Sub 120 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.000 TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 1.0 0.0 0.0 N/A
Latin American 2 Sub 514 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.000 TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 1.0 0.0 0.0 N/A
South Asian Sub 78 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Other Sub 348 TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.000 TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 1.0 0.0 0.0 N/A


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 (TG)14T=0.884189 delGTGT=0.115811
14KJPN JAPANESE Study-wide 28258 (TG)14T=0.98397 delGTGT=0.01603
8.3KJPN JAPANESE Study-wide 16760 (TG)14T=0.98389 delGTGT=0.01611
Allele Frequency Aggregator Total Global 8330 (TG)14T=1.0000 del(GT)7=0.0000, del(GT)4=0.0000, del(GT)3=0.0000, delGTGT=0.0000, delGT=0.0000, dupGT=0.0000, dupGTGT=0.0000, dup(GT)3=0.0000, dup(GT)4=0.0000, dup(GT)5=0.0000, dup(GT)6=0.0000, dup(GT)7=0.0000, dup(GT)8=0.0000
Allele Frequency Aggregator European Sub 5020 (TG)14T=1.0000 del(GT)7=0.0000, del(GT)4=0.0000, del(GT)3=0.0000, delGTGT=0.0000, delGT=0.0000, dupGT=0.0000, dupGTGT=0.0000, dup(GT)3=0.0000, dup(GT)4=0.0000, dup(GT)5=0.0000, dup(GT)6=0.0000, dup(GT)7=0.0000, dup(GT)8=0.0000
Allele Frequency Aggregator African Sub 2152 (TG)14T=1.0000 del(GT)7=0.0000, del(GT)4=0.0000, del(GT)3=0.0000, delGTGT=0.0000, delGT=0.0000, dupGT=0.0000, dupGTGT=0.0000, dup(GT)3=0.0000, dup(GT)4=0.0000, dup(GT)5=0.0000, dup(GT)6=0.0000, dup(GT)7=0.0000, dup(GT)8=0.0000
Allele Frequency Aggregator Latin American 2 Sub 514 (TG)14T=1.000 del(GT)7=0.000, del(GT)4=0.000, del(GT)3=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)3=0.000, dup(GT)4=0.000, dup(GT)5=0.000, dup(GT)6=0.000, dup(GT)7=0.000, dup(GT)8=0.000
Allele Frequency Aggregator Other Sub 348 (TG)14T=1.000 del(GT)7=0.000, del(GT)4=0.000, del(GT)3=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)3=0.000, dup(GT)4=0.000, dup(GT)5=0.000, dup(GT)6=0.000, dup(GT)7=0.000, dup(GT)8=0.000
Allele Frequency Aggregator Latin American 1 Sub 120 (TG)14T=1.000 del(GT)7=0.000, del(GT)4=0.000, del(GT)3=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)3=0.000, dup(GT)4=0.000, dup(GT)5=0.000, dup(GT)6=0.000, dup(GT)7=0.000, dup(GT)8=0.000
Allele Frequency Aggregator Asian Sub 98 (TG)14T=1.00 del(GT)7=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00, dup(GT)5=0.00, dup(GT)6=0.00, dup(GT)7=0.00, dup(GT)8=0.00
Allele Frequency Aggregator South Asian Sub 78 (TG)14T=1.00 del(GT)7=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00, dup(GT)5=0.00, dup(GT)6=0.00, dup(GT)7=0.00, dup(GT)8=0.00
Korean Genome Project KOREAN Study-wide 1832 (TG)14T=0.9782 delGTGT=0.0218
Northern Sweden ACPOP Study-wide 600 (TG)14T=0.787 delGTGT=0.213
The Danish reference pan genome Danish Study-wide 40 (TG)14T=0.88 delGTGT=0.12
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[7]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[9]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[10]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[11]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[12]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[13]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[15]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[16]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[17]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[18]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[19]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[20]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[21]
GRCh38.p14 chr 3 NC_000003.12:g.179961203GT[22]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[7]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[9]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[10]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[11]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[12]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[13]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[15]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[16]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[17]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[18]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[19]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[20]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[21]
GRCh37.p13 chr 3 NC_000003.11:g.179678991GT[22]
Gene: PEX5L, peroxisomal biogenesis factor 5 like (minus strand)
Molecule type Change Amino acid[Codon] SO Term
PEX5L transcript variant 2 NM_001256750.2:c.22-60494…

NM_001256750.2:c.22-60494CA[7]

N/A Intron Variant
PEX5L transcript variant 3 NM_001256751.2:c.22-62983…

NM_001256751.2:c.22-62983CA[7]

N/A Intron Variant
PEX5L transcript variant 4 NM_001256752.2:c.93+10365…

NM_001256752.2:c.93+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 5 NM_001256753.2:c.22-73445…

NM_001256753.2:c.22-73445CA[7]

N/A Intron Variant
PEX5L transcript variant 6 NM_001256754.2:c.-37+1036…

NM_001256754.2:c.-37+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 7 NM_001256755.2:c.-37+1036…

NM_001256755.2:c.-37+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 8 NM_001256756.2:c.-379+103…

NM_001256756.2:c.-379+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 9 NM_001349386.2:c.258+1036…

NM_001349386.2:c.258+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 10 NM_001349387.2:c.165+1036…

NM_001349387.2:c.165+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 11 NM_001349388.2:c.165+1036…

NM_001349388.2:c.165+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 12 NM_001349389.2:c.93+10365…

NM_001349389.2:c.93+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 13 NM_001349390.2:c.258+1036…

NM_001349390.2:c.258+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 14 NM_001349391.2:c.258+1036…

NM_001349391.2:c.258+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 15 NM_001349392.2:c.165+1036…

NM_001349392.2:c.165+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 16 NM_001349393.2:c.165+1036…

NM_001349393.2:c.165+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 17 NM_001349394.2:c.165+1036…

NM_001349394.2:c.165+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 18 NM_001349395.2:c.-37+1036…

NM_001349395.2:c.-37+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 19 NM_001349396.2:c.22-60494…

NM_001349396.2:c.22-60494CA[7]

N/A Intron Variant
PEX5L transcript variant 20 NM_001349397.2:c.165+1036…

NM_001349397.2:c.165+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 21 NM_001349398.2:c.22-62983…

NM_001349398.2:c.22-62983CA[7]

N/A Intron Variant
PEX5L transcript variant 22 NM_001349399.2:c.-371-629…

NM_001349399.2:c.-371-62983CA[7]

N/A Intron Variant
PEX5L transcript variant 23 NM_001349401.2:c.-267+753…

NM_001349401.2:c.-267+75350CA[7]

N/A Intron Variant
PEX5L transcript variant 24 NM_001349404.2:c.-72+7535…

NM_001349404.2:c.-72+75350CA[7]

N/A Intron Variant
PEX5L transcript variant 25 NM_001349406.2:c.-267+103…

NM_001349406.2:c.-267+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 26 NM_001349408.2:c.-372+103…

NM_001349408.2:c.-372+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 27 NM_001349409.2:c.-372+103…

NM_001349409.2:c.-372+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 28 NM_001349410.2:c.-184+103…

NM_001349410.2:c.-184+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 1 NM_016559.3:c.93+10365CA[…

NM_016559.3:c.93+10365CA[7]

N/A Intron Variant
PEX5L transcript variant 29 NR_146167.2:n. N/A Intron Variant
PEX5L transcript variant X1 XM_024453590.2:c.258+1036…

XM_024453590.2:c.258+10365CA[7]

N/A Intron Variant
PEX5L transcript variant X2 XM_024453591.2:c.165+1036…

XM_024453591.2:c.165+10365CA[7]

N/A Intron Variant
PEX5L transcript variant X3 XM_024453592.2:c.258+1036…

XM_024453592.2:c.258+10365CA[7]

N/A Intron Variant
PEX5L transcript variant X5 XM_024453593.2:c.258+1036…

XM_024453593.2:c.258+10365CA[7]

N/A Intron Variant
PEX5L transcript variant X6 XM_047448297.1:c.93+10365…

XM_047448297.1:c.93+10365CA[7]

N/A Intron Variant
PEX5L transcript variant X7 XM_047448298.1:c.93+10365…

XM_047448298.1:c.93+10365CA[7]

N/A Intron Variant
PEX5L transcript variant X8 XM_047448299.1:c.22-73445…

XM_047448299.1:c.22-73445CA[7]

N/A Intron Variant
PEX5L transcript variant X4 XM_011512888.3:c. N/A Genic Upstream Transcript Variant
PEX5L transcript variant X9 XM_011512891.3:c. N/A Genic Upstream Transcript Variant
Gene: LOC124909463, uncharacterized LOC124909463 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
LOC124909463 transcript XR_007096182.1:n. N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (TG)14T= del(GT)7 del(GT)5 del(GT)4 del(GT)3 delGTGT delGT dupGT dupGTGT dup(GT)3 dup(GT)4 dup(GT)5 dup(GT)6 dup(GT)7 dup(GT)8
GRCh38.p14 chr 3 NC_000003.12:g.179961202_179961230= NC_000003.12:g.179961203GT[7] NC_000003.12:g.179961203GT[9] NC_000003.12:g.179961203GT[10] NC_000003.12:g.179961203GT[11] NC_000003.12:g.179961203GT[12] NC_000003.12:g.179961203GT[13] NC_000003.12:g.179961203GT[15] NC_000003.12:g.179961203GT[16] NC_000003.12:g.179961203GT[17] NC_000003.12:g.179961203GT[18] NC_000003.12:g.179961203GT[19] NC_000003.12:g.179961203GT[20] NC_000003.12:g.179961203GT[21] NC_000003.12:g.179961203GT[22]
GRCh37.p13 chr 3 NC_000003.11:g.179678990_179679018= NC_000003.11:g.179678991GT[7] NC_000003.11:g.179678991GT[9] NC_000003.11:g.179678991GT[10] NC_000003.11:g.179678991GT[11] NC_000003.11:g.179678991GT[12] NC_000003.11:g.179678991GT[13] NC_000003.11:g.179678991GT[15] NC_000003.11:g.179678991GT[16] NC_000003.11:g.179678991GT[17] NC_000003.11:g.179678991GT[18] NC_000003.11:g.179678991GT[19] NC_000003.11:g.179678991GT[20] NC_000003.11:g.179678991GT[21] NC_000003.11:g.179678991GT[22]
PEX5L transcript variant 2 NM_001256750.1:c.22-60467= NM_001256750.1:c.22-60494CA[7] NM_001256750.1:c.22-60494CA[9] NM_001256750.1:c.22-60494CA[10] NM_001256750.1:c.22-60494CA[11] NM_001256750.1:c.22-60494CA[12] NM_001256750.1:c.22-60494CA[13] NM_001256750.1:c.22-60494CA[15] NM_001256750.1:c.22-60494CA[16] NM_001256750.1:c.22-60494CA[17] NM_001256750.1:c.22-60494CA[18] NM_001256750.1:c.22-60494CA[19] NM_001256750.1:c.22-60494CA[20] NM_001256750.1:c.22-60494CA[21] NM_001256750.1:c.22-60494CA[22]
PEX5L transcript variant 2 NM_001256750.2:c.22-60467= NM_001256750.2:c.22-60494CA[7] NM_001256750.2:c.22-60494CA[9] NM_001256750.2:c.22-60494CA[10] NM_001256750.2:c.22-60494CA[11] NM_001256750.2:c.22-60494CA[12] NM_001256750.2:c.22-60494CA[13] NM_001256750.2:c.22-60494CA[15] NM_001256750.2:c.22-60494CA[16] NM_001256750.2:c.22-60494CA[17] NM_001256750.2:c.22-60494CA[18] NM_001256750.2:c.22-60494CA[19] NM_001256750.2:c.22-60494CA[20] NM_001256750.2:c.22-60494CA[21] NM_001256750.2:c.22-60494CA[22]
PEX5L transcript variant 3 NM_001256751.1:c.22-62956= NM_001256751.1:c.22-62983CA[7] NM_001256751.1:c.22-62983CA[9] NM_001256751.1:c.22-62983CA[10] NM_001256751.1:c.22-62983CA[11] NM_001256751.1:c.22-62983CA[12] NM_001256751.1:c.22-62983CA[13] NM_001256751.1:c.22-62983CA[15] NM_001256751.1:c.22-62983CA[16] NM_001256751.1:c.22-62983CA[17] NM_001256751.1:c.22-62983CA[18] NM_001256751.1:c.22-62983CA[19] NM_001256751.1:c.22-62983CA[20] NM_001256751.1:c.22-62983CA[21] NM_001256751.1:c.22-62983CA[22]
PEX5L transcript variant 3 NM_001256751.2:c.22-62956= NM_001256751.2:c.22-62983CA[7] NM_001256751.2:c.22-62983CA[9] NM_001256751.2:c.22-62983CA[10] NM_001256751.2:c.22-62983CA[11] NM_001256751.2:c.22-62983CA[12] NM_001256751.2:c.22-62983CA[13] NM_001256751.2:c.22-62983CA[15] NM_001256751.2:c.22-62983CA[16] NM_001256751.2:c.22-62983CA[17] NM_001256751.2:c.22-62983CA[18] NM_001256751.2:c.22-62983CA[19] NM_001256751.2:c.22-62983CA[20] NM_001256751.2:c.22-62983CA[21] NM_001256751.2:c.22-62983CA[22]
PEX5L transcript variant 4 NM_001256752.1:c.93+10392= NM_001256752.1:c.93+10365CA[7] NM_001256752.1:c.93+10365CA[9] NM_001256752.1:c.93+10365CA[10] NM_001256752.1:c.93+10365CA[11] NM_001256752.1:c.93+10365CA[12] NM_001256752.1:c.93+10365CA[13] NM_001256752.1:c.93+10365CA[15] NM_001256752.1:c.93+10365CA[16] NM_001256752.1:c.93+10365CA[17] NM_001256752.1:c.93+10365CA[18] NM_001256752.1:c.93+10365CA[19] NM_001256752.1:c.93+10365CA[20] NM_001256752.1:c.93+10365CA[21] NM_001256752.1:c.93+10365CA[22]
PEX5L transcript variant 4 NM_001256752.2:c.93+10392= NM_001256752.2:c.93+10365CA[7] NM_001256752.2:c.93+10365CA[9] NM_001256752.2:c.93+10365CA[10] NM_001256752.2:c.93+10365CA[11] NM_001256752.2:c.93+10365CA[12] NM_001256752.2:c.93+10365CA[13] NM_001256752.2:c.93+10365CA[15] NM_001256752.2:c.93+10365CA[16] NM_001256752.2:c.93+10365CA[17] NM_001256752.2:c.93+10365CA[18] NM_001256752.2:c.93+10365CA[19] NM_001256752.2:c.93+10365CA[20] NM_001256752.2:c.93+10365CA[21] NM_001256752.2:c.93+10365CA[22]
PEX5L transcript variant 5 NM_001256753.1:c.22-73418= NM_001256753.1:c.22-73445CA[7] NM_001256753.1:c.22-73445CA[9] NM_001256753.1:c.22-73445CA[10] NM_001256753.1:c.22-73445CA[11] NM_001256753.1:c.22-73445CA[12] NM_001256753.1:c.22-73445CA[13] NM_001256753.1:c.22-73445CA[15] NM_001256753.1:c.22-73445CA[16] NM_001256753.1:c.22-73445CA[17] NM_001256753.1:c.22-73445CA[18] NM_001256753.1:c.22-73445CA[19] NM_001256753.1:c.22-73445CA[20] NM_001256753.1:c.22-73445CA[21] NM_001256753.1:c.22-73445CA[22]
PEX5L transcript variant 5 NM_001256753.2:c.22-73418= NM_001256753.2:c.22-73445CA[7] NM_001256753.2:c.22-73445CA[9] NM_001256753.2:c.22-73445CA[10] NM_001256753.2:c.22-73445CA[11] NM_001256753.2:c.22-73445CA[12] NM_001256753.2:c.22-73445CA[13] NM_001256753.2:c.22-73445CA[15] NM_001256753.2:c.22-73445CA[16] NM_001256753.2:c.22-73445CA[17] NM_001256753.2:c.22-73445CA[18] NM_001256753.2:c.22-73445CA[19] NM_001256753.2:c.22-73445CA[20] NM_001256753.2:c.22-73445CA[21] NM_001256753.2:c.22-73445CA[22]
PEX5L transcript variant 6 NM_001256754.1:c.-37+10392= NM_001256754.1:c.-37+10365CA[7] NM_001256754.1:c.-37+10365CA[9] NM_001256754.1:c.-37+10365CA[10] NM_001256754.1:c.-37+10365CA[11] NM_001256754.1:c.-37+10365CA[12] NM_001256754.1:c.-37+10365CA[13] NM_001256754.1:c.-37+10365CA[15] NM_001256754.1:c.-37+10365CA[16] NM_001256754.1:c.-37+10365CA[17] NM_001256754.1:c.-37+10365CA[18] NM_001256754.1:c.-37+10365CA[19] NM_001256754.1:c.-37+10365CA[20] NM_001256754.1:c.-37+10365CA[21] NM_001256754.1:c.-37+10365CA[22]
PEX5L transcript variant 6 NM_001256754.2:c.-37+10392= NM_001256754.2:c.-37+10365CA[7] NM_001256754.2:c.-37+10365CA[9] NM_001256754.2:c.-37+10365CA[10] NM_001256754.2:c.-37+10365CA[11] NM_001256754.2:c.-37+10365CA[12] NM_001256754.2:c.-37+10365CA[13] NM_001256754.2:c.-37+10365CA[15] NM_001256754.2:c.-37+10365CA[16] NM_001256754.2:c.-37+10365CA[17] NM_001256754.2:c.-37+10365CA[18] NM_001256754.2:c.-37+10365CA[19] NM_001256754.2:c.-37+10365CA[20] NM_001256754.2:c.-37+10365CA[21] NM_001256754.2:c.-37+10365CA[22]
PEX5L transcript variant 7 NM_001256755.1:c.-37+10392= NM_001256755.1:c.-37+10365CA[7] NM_001256755.1:c.-37+10365CA[9] NM_001256755.1:c.-37+10365CA[10] NM_001256755.1:c.-37+10365CA[11] NM_001256755.1:c.-37+10365CA[12] NM_001256755.1:c.-37+10365CA[13] NM_001256755.1:c.-37+10365CA[15] NM_001256755.1:c.-37+10365CA[16] NM_001256755.1:c.-37+10365CA[17] NM_001256755.1:c.-37+10365CA[18] NM_001256755.1:c.-37+10365CA[19] NM_001256755.1:c.-37+10365CA[20] NM_001256755.1:c.-37+10365CA[21] NM_001256755.1:c.-37+10365CA[22]
PEX5L transcript variant 7 NM_001256755.2:c.-37+10392= NM_001256755.2:c.-37+10365CA[7] NM_001256755.2:c.-37+10365CA[9] NM_001256755.2:c.-37+10365CA[10] NM_001256755.2:c.-37+10365CA[11] NM_001256755.2:c.-37+10365CA[12] NM_001256755.2:c.-37+10365CA[13] NM_001256755.2:c.-37+10365CA[15] NM_001256755.2:c.-37+10365CA[16] NM_001256755.2:c.-37+10365CA[17] NM_001256755.2:c.-37+10365CA[18] NM_001256755.2:c.-37+10365CA[19] NM_001256755.2:c.-37+10365CA[20] NM_001256755.2:c.-37+10365CA[21] NM_001256755.2:c.-37+10365CA[22]
PEX5L transcript variant 8 NM_001256756.1:c.-379+10392= NM_001256756.1:c.-379+10365CA[7] NM_001256756.1:c.-379+10365CA[9] NM_001256756.1:c.-379+10365CA[10] NM_001256756.1:c.-379+10365CA[11] NM_001256756.1:c.-379+10365CA[12] NM_001256756.1:c.-379+10365CA[13] NM_001256756.1:c.-379+10365CA[15] NM_001256756.1:c.-379+10365CA[16] NM_001256756.1:c.-379+10365CA[17] NM_001256756.1:c.-379+10365CA[18] NM_001256756.1:c.-379+10365CA[19] NM_001256756.1:c.-379+10365CA[20] NM_001256756.1:c.-379+10365CA[21] NM_001256756.1:c.-379+10365CA[22]
PEX5L transcript variant 8 NM_001256756.2:c.-379+10392= NM_001256756.2:c.-379+10365CA[7] NM_001256756.2:c.-379+10365CA[9] NM_001256756.2:c.-379+10365CA[10] NM_001256756.2:c.-379+10365CA[11] NM_001256756.2:c.-379+10365CA[12] NM_001256756.2:c.-379+10365CA[13] NM_001256756.2:c.-379+10365CA[15] NM_001256756.2:c.-379+10365CA[16] NM_001256756.2:c.-379+10365CA[17] NM_001256756.2:c.-379+10365CA[18] NM_001256756.2:c.-379+10365CA[19] NM_001256756.2:c.-379+10365CA[20] NM_001256756.2:c.-379+10365CA[21] NM_001256756.2:c.-379+10365CA[22]
PEX5L transcript variant 9 NM_001349386.2:c.258+10392= NM_001349386.2:c.258+10365CA[7] NM_001349386.2:c.258+10365CA[9] NM_001349386.2:c.258+10365CA[10] NM_001349386.2:c.258+10365CA[11] NM_001349386.2:c.258+10365CA[12] NM_001349386.2:c.258+10365CA[13] NM_001349386.2:c.258+10365CA[15] NM_001349386.2:c.258+10365CA[16] NM_001349386.2:c.258+10365CA[17] NM_001349386.2:c.258+10365CA[18] NM_001349386.2:c.258+10365CA[19] NM_001349386.2:c.258+10365CA[20] NM_001349386.2:c.258+10365CA[21] NM_001349386.2:c.258+10365CA[22]
PEX5L transcript variant 10 NM_001349387.2:c.165+10392= NM_001349387.2:c.165+10365CA[7] NM_001349387.2:c.165+10365CA[9] NM_001349387.2:c.165+10365CA[10] NM_001349387.2:c.165+10365CA[11] NM_001349387.2:c.165+10365CA[12] NM_001349387.2:c.165+10365CA[13] NM_001349387.2:c.165+10365CA[15] NM_001349387.2:c.165+10365CA[16] NM_001349387.2:c.165+10365CA[17] NM_001349387.2:c.165+10365CA[18] NM_001349387.2:c.165+10365CA[19] NM_001349387.2:c.165+10365CA[20] NM_001349387.2:c.165+10365CA[21] NM_001349387.2:c.165+10365CA[22]
PEX5L transcript variant 11 NM_001349388.2:c.165+10392= NM_001349388.2:c.165+10365CA[7] NM_001349388.2:c.165+10365CA[9] NM_001349388.2:c.165+10365CA[10] NM_001349388.2:c.165+10365CA[11] NM_001349388.2:c.165+10365CA[12] NM_001349388.2:c.165+10365CA[13] NM_001349388.2:c.165+10365CA[15] NM_001349388.2:c.165+10365CA[16] NM_001349388.2:c.165+10365CA[17] NM_001349388.2:c.165+10365CA[18] NM_001349388.2:c.165+10365CA[19] NM_001349388.2:c.165+10365CA[20] NM_001349388.2:c.165+10365CA[21] NM_001349388.2:c.165+10365CA[22]
PEX5L transcript variant 12 NM_001349389.2:c.93+10392= NM_001349389.2:c.93+10365CA[7] NM_001349389.2:c.93+10365CA[9] NM_001349389.2:c.93+10365CA[10] NM_001349389.2:c.93+10365CA[11] NM_001349389.2:c.93+10365CA[12] NM_001349389.2:c.93+10365CA[13] NM_001349389.2:c.93+10365CA[15] NM_001349389.2:c.93+10365CA[16] NM_001349389.2:c.93+10365CA[17] NM_001349389.2:c.93+10365CA[18] NM_001349389.2:c.93+10365CA[19] NM_001349389.2:c.93+10365CA[20] NM_001349389.2:c.93+10365CA[21] NM_001349389.2:c.93+10365CA[22]
PEX5L transcript variant 13 NM_001349390.2:c.258+10392= NM_001349390.2:c.258+10365CA[7] NM_001349390.2:c.258+10365CA[9] NM_001349390.2:c.258+10365CA[10] NM_001349390.2:c.258+10365CA[11] NM_001349390.2:c.258+10365CA[12] NM_001349390.2:c.258+10365CA[13] NM_001349390.2:c.258+10365CA[15] NM_001349390.2:c.258+10365CA[16] NM_001349390.2:c.258+10365CA[17] NM_001349390.2:c.258+10365CA[18] NM_001349390.2:c.258+10365CA[19] NM_001349390.2:c.258+10365CA[20] NM_001349390.2:c.258+10365CA[21] NM_001349390.2:c.258+10365CA[22]
PEX5L transcript variant 14 NM_001349391.2:c.258+10392= NM_001349391.2:c.258+10365CA[7] NM_001349391.2:c.258+10365CA[9] NM_001349391.2:c.258+10365CA[10] NM_001349391.2:c.258+10365CA[11] NM_001349391.2:c.258+10365CA[12] NM_001349391.2:c.258+10365CA[13] NM_001349391.2:c.258+10365CA[15] NM_001349391.2:c.258+10365CA[16] NM_001349391.2:c.258+10365CA[17] NM_001349391.2:c.258+10365CA[18] NM_001349391.2:c.258+10365CA[19] NM_001349391.2:c.258+10365CA[20] NM_001349391.2:c.258+10365CA[21] NM_001349391.2:c.258+10365CA[22]
PEX5L transcript variant 15 NM_001349392.2:c.165+10392= NM_001349392.2:c.165+10365CA[7] NM_001349392.2:c.165+10365CA[9] NM_001349392.2:c.165+10365CA[10] NM_001349392.2:c.165+10365CA[11] NM_001349392.2:c.165+10365CA[12] NM_001349392.2:c.165+10365CA[13] NM_001349392.2:c.165+10365CA[15] NM_001349392.2:c.165+10365CA[16] NM_001349392.2:c.165+10365CA[17] NM_001349392.2:c.165+10365CA[18] NM_001349392.2:c.165+10365CA[19] NM_001349392.2:c.165+10365CA[20] NM_001349392.2:c.165+10365CA[21] NM_001349392.2:c.165+10365CA[22]
PEX5L transcript variant 16 NM_001349393.2:c.165+10392= NM_001349393.2:c.165+10365CA[7] NM_001349393.2:c.165+10365CA[9] NM_001349393.2:c.165+10365CA[10] NM_001349393.2:c.165+10365CA[11] NM_001349393.2:c.165+10365CA[12] NM_001349393.2:c.165+10365CA[13] NM_001349393.2:c.165+10365CA[15] NM_001349393.2:c.165+10365CA[16] NM_001349393.2:c.165+10365CA[17] NM_001349393.2:c.165+10365CA[18] NM_001349393.2:c.165+10365CA[19] NM_001349393.2:c.165+10365CA[20] NM_001349393.2:c.165+10365CA[21] NM_001349393.2:c.165+10365CA[22]
PEX5L transcript variant 17 NM_001349394.2:c.165+10392= NM_001349394.2:c.165+10365CA[7] NM_001349394.2:c.165+10365CA[9] NM_001349394.2:c.165+10365CA[10] NM_001349394.2:c.165+10365CA[11] NM_001349394.2:c.165+10365CA[12] NM_001349394.2:c.165+10365CA[13] NM_001349394.2:c.165+10365CA[15] NM_001349394.2:c.165+10365CA[16] NM_001349394.2:c.165+10365CA[17] NM_001349394.2:c.165+10365CA[18] NM_001349394.2:c.165+10365CA[19] NM_001349394.2:c.165+10365CA[20] NM_001349394.2:c.165+10365CA[21] NM_001349394.2:c.165+10365CA[22]
PEX5L transcript variant 18 NM_001349395.2:c.-37+10392= NM_001349395.2:c.-37+10365CA[7] NM_001349395.2:c.-37+10365CA[9] NM_001349395.2:c.-37+10365CA[10] NM_001349395.2:c.-37+10365CA[11] NM_001349395.2:c.-37+10365CA[12] NM_001349395.2:c.-37+10365CA[13] NM_001349395.2:c.-37+10365CA[15] NM_001349395.2:c.-37+10365CA[16] NM_001349395.2:c.-37+10365CA[17] NM_001349395.2:c.-37+10365CA[18] NM_001349395.2:c.-37+10365CA[19] NM_001349395.2:c.-37+10365CA[20] NM_001349395.2:c.-37+10365CA[21] NM_001349395.2:c.-37+10365CA[22]
PEX5L transcript variant 19 NM_001349396.2:c.22-60467= NM_001349396.2:c.22-60494CA[7] NM_001349396.2:c.22-60494CA[9] NM_001349396.2:c.22-60494CA[10] NM_001349396.2:c.22-60494CA[11] NM_001349396.2:c.22-60494CA[12] NM_001349396.2:c.22-60494CA[13] NM_001349396.2:c.22-60494CA[15] NM_001349396.2:c.22-60494CA[16] NM_001349396.2:c.22-60494CA[17] NM_001349396.2:c.22-60494CA[18] NM_001349396.2:c.22-60494CA[19] NM_001349396.2:c.22-60494CA[20] NM_001349396.2:c.22-60494CA[21] NM_001349396.2:c.22-60494CA[22]
PEX5L transcript variant 20 NM_001349397.2:c.165+10392= NM_001349397.2:c.165+10365CA[7] NM_001349397.2:c.165+10365CA[9] NM_001349397.2:c.165+10365CA[10] NM_001349397.2:c.165+10365CA[11] NM_001349397.2:c.165+10365CA[12] NM_001349397.2:c.165+10365CA[13] NM_001349397.2:c.165+10365CA[15] NM_001349397.2:c.165+10365CA[16] NM_001349397.2:c.165+10365CA[17] NM_001349397.2:c.165+10365CA[18] NM_001349397.2:c.165+10365CA[19] NM_001349397.2:c.165+10365CA[20] NM_001349397.2:c.165+10365CA[21] NM_001349397.2:c.165+10365CA[22]
PEX5L transcript variant 21 NM_001349398.2:c.22-62956= NM_001349398.2:c.22-62983CA[7] NM_001349398.2:c.22-62983CA[9] NM_001349398.2:c.22-62983CA[10] NM_001349398.2:c.22-62983CA[11] NM_001349398.2:c.22-62983CA[12] NM_001349398.2:c.22-62983CA[13] NM_001349398.2:c.22-62983CA[15] NM_001349398.2:c.22-62983CA[16] NM_001349398.2:c.22-62983CA[17] NM_001349398.2:c.22-62983CA[18] NM_001349398.2:c.22-62983CA[19] NM_001349398.2:c.22-62983CA[20] NM_001349398.2:c.22-62983CA[21] NM_001349398.2:c.22-62983CA[22]
PEX5L transcript variant 22 NM_001349399.2:c.-371-62956= NM_001349399.2:c.-371-62983CA[7] NM_001349399.2:c.-371-62983CA[9] NM_001349399.2:c.-371-62983CA[10] NM_001349399.2:c.-371-62983CA[11] NM_001349399.2:c.-371-62983CA[12] NM_001349399.2:c.-371-62983CA[13] NM_001349399.2:c.-371-62983CA[15] NM_001349399.2:c.-371-62983CA[16] NM_001349399.2:c.-371-62983CA[17] NM_001349399.2:c.-371-62983CA[18] NM_001349399.2:c.-371-62983CA[19] NM_001349399.2:c.-371-62983CA[20] NM_001349399.2:c.-371-62983CA[21] NM_001349399.2:c.-371-62983CA[22]
PEX5L transcript variant 23 NM_001349401.2:c.-267+75377= NM_001349401.2:c.-267+75350CA[7] NM_001349401.2:c.-267+75350CA[9] NM_001349401.2:c.-267+75350CA[10] NM_001349401.2:c.-267+75350CA[11] NM_001349401.2:c.-267+75350CA[12] NM_001349401.2:c.-267+75350CA[13] NM_001349401.2:c.-267+75350CA[15] NM_001349401.2:c.-267+75350CA[16] NM_001349401.2:c.-267+75350CA[17] NM_001349401.2:c.-267+75350CA[18] NM_001349401.2:c.-267+75350CA[19] NM_001349401.2:c.-267+75350CA[20] NM_001349401.2:c.-267+75350CA[21] NM_001349401.2:c.-267+75350CA[22]
PEX5L transcript variant 24 NM_001349404.2:c.-72+75377= NM_001349404.2:c.-72+75350CA[7] NM_001349404.2:c.-72+75350CA[9] NM_001349404.2:c.-72+75350CA[10] NM_001349404.2:c.-72+75350CA[11] NM_001349404.2:c.-72+75350CA[12] NM_001349404.2:c.-72+75350CA[13] NM_001349404.2:c.-72+75350CA[15] NM_001349404.2:c.-72+75350CA[16] NM_001349404.2:c.-72+75350CA[17] NM_001349404.2:c.-72+75350CA[18] NM_001349404.2:c.-72+75350CA[19] NM_001349404.2:c.-72+75350CA[20] NM_001349404.2:c.-72+75350CA[21] NM_001349404.2:c.-72+75350CA[22]
PEX5L transcript variant 25 NM_001349406.2:c.-267+10392= NM_001349406.2:c.-267+10365CA[7] NM_001349406.2:c.-267+10365CA[9] NM_001349406.2:c.-267+10365CA[10] NM_001349406.2:c.-267+10365CA[11] NM_001349406.2:c.-267+10365CA[12] NM_001349406.2:c.-267+10365CA[13] NM_001349406.2:c.-267+10365CA[15] NM_001349406.2:c.-267+10365CA[16] NM_001349406.2:c.-267+10365CA[17] NM_001349406.2:c.-267+10365CA[18] NM_001349406.2:c.-267+10365CA[19] NM_001349406.2:c.-267+10365CA[20] NM_001349406.2:c.-267+10365CA[21] NM_001349406.2:c.-267+10365CA[22]
PEX5L transcript variant 26 NM_001349408.2:c.-372+10392= NM_001349408.2:c.-372+10365CA[7] NM_001349408.2:c.-372+10365CA[9] NM_001349408.2:c.-372+10365CA[10] NM_001349408.2:c.-372+10365CA[11] NM_001349408.2:c.-372+10365CA[12] NM_001349408.2:c.-372+10365CA[13] NM_001349408.2:c.-372+10365CA[15] NM_001349408.2:c.-372+10365CA[16] NM_001349408.2:c.-372+10365CA[17] NM_001349408.2:c.-372+10365CA[18] NM_001349408.2:c.-372+10365CA[19] NM_001349408.2:c.-372+10365CA[20] NM_001349408.2:c.-372+10365CA[21] NM_001349408.2:c.-372+10365CA[22]
PEX5L transcript variant 27 NM_001349409.2:c.-372+10392= NM_001349409.2:c.-372+10365CA[7] NM_001349409.2:c.-372+10365CA[9] NM_001349409.2:c.-372+10365CA[10] NM_001349409.2:c.-372+10365CA[11] NM_001349409.2:c.-372+10365CA[12] NM_001349409.2:c.-372+10365CA[13] NM_001349409.2:c.-372+10365CA[15] NM_001349409.2:c.-372+10365CA[16] NM_001349409.2:c.-372+10365CA[17] NM_001349409.2:c.-372+10365CA[18] NM_001349409.2:c.-372+10365CA[19] NM_001349409.2:c.-372+10365CA[20] NM_001349409.2:c.-372+10365CA[21] NM_001349409.2:c.-372+10365CA[22]
PEX5L transcript variant 28 NM_001349410.2:c.-184+10392= NM_001349410.2:c.-184+10365CA[7] NM_001349410.2:c.-184+10365CA[9] NM_001349410.2:c.-184+10365CA[10] NM_001349410.2:c.-184+10365CA[11] NM_001349410.2:c.-184+10365CA[12] NM_001349410.2:c.-184+10365CA[13] NM_001349410.2:c.-184+10365CA[15] NM_001349410.2:c.-184+10365CA[16] NM_001349410.2:c.-184+10365CA[17] NM_001349410.2:c.-184+10365CA[18] NM_001349410.2:c.-184+10365CA[19] NM_001349410.2:c.-184+10365CA[20] NM_001349410.2:c.-184+10365CA[21] NM_001349410.2:c.-184+10365CA[22]
PEX5L transcript variant 1 NM_016559.2:c.93+10392= NM_016559.2:c.93+10365CA[7] NM_016559.2:c.93+10365CA[9] NM_016559.2:c.93+10365CA[10] NM_016559.2:c.93+10365CA[11] NM_016559.2:c.93+10365CA[12] NM_016559.2:c.93+10365CA[13] NM_016559.2:c.93+10365CA[15] NM_016559.2:c.93+10365CA[16] NM_016559.2:c.93+10365CA[17] NM_016559.2:c.93+10365CA[18] NM_016559.2:c.93+10365CA[19] NM_016559.2:c.93+10365CA[20] NM_016559.2:c.93+10365CA[21] NM_016559.2:c.93+10365CA[22]
PEX5L transcript variant 1 NM_016559.3:c.93+10392= NM_016559.3:c.93+10365CA[7] NM_016559.3:c.93+10365CA[9] NM_016559.3:c.93+10365CA[10] NM_016559.3:c.93+10365CA[11] NM_016559.3:c.93+10365CA[12] NM_016559.3:c.93+10365CA[13] NM_016559.3:c.93+10365CA[15] NM_016559.3:c.93+10365CA[16] NM_016559.3:c.93+10365CA[17] NM_016559.3:c.93+10365CA[18] NM_016559.3:c.93+10365CA[19] NM_016559.3:c.93+10365CA[20] NM_016559.3:c.93+10365CA[21] NM_016559.3:c.93+10365CA[22]
PEX5L transcript variant X1 XM_005247523.1:c.165+10392= XM_005247523.1:c.165+10365CA[7] XM_005247523.1:c.165+10365CA[9] XM_005247523.1:c.165+10365CA[10] XM_005247523.1:c.165+10365CA[11] XM_005247523.1:c.165+10365CA[12] XM_005247523.1:c.165+10365CA[13] XM_005247523.1:c.165+10365CA[15] XM_005247523.1:c.165+10365CA[16] XM_005247523.1:c.165+10365CA[17] XM_005247523.1:c.165+10365CA[18] XM_005247523.1:c.165+10365CA[19] XM_005247523.1:c.165+10365CA[20] XM_005247523.1:c.165+10365CA[21] XM_005247523.1:c.165+10365CA[22]
PEX5L transcript variant X2 XM_005247524.1:c.165+10392= XM_005247524.1:c.165+10365CA[7] XM_005247524.1:c.165+10365CA[9] XM_005247524.1:c.165+10365CA[10] XM_005247524.1:c.165+10365CA[11] XM_005247524.1:c.165+10365CA[12] XM_005247524.1:c.165+10365CA[13] XM_005247524.1:c.165+10365CA[15] XM_005247524.1:c.165+10365CA[16] XM_005247524.1:c.165+10365CA[17] XM_005247524.1:c.165+10365CA[18] XM_005247524.1:c.165+10365CA[19] XM_005247524.1:c.165+10365CA[20] XM_005247524.1:c.165+10365CA[21] XM_005247524.1:c.165+10365CA[22]
PEX5L transcript variant X3 XM_005247525.1:c.165+10392= XM_005247525.1:c.165+10365CA[7] XM_005247525.1:c.165+10365CA[9] XM_005247525.1:c.165+10365CA[10] XM_005247525.1:c.165+10365CA[11] XM_005247525.1:c.165+10365CA[12] XM_005247525.1:c.165+10365CA[13] XM_005247525.1:c.165+10365CA[15] XM_005247525.1:c.165+10365CA[16] XM_005247525.1:c.165+10365CA[17] XM_005247525.1:c.165+10365CA[18] XM_005247525.1:c.165+10365CA[19] XM_005247525.1:c.165+10365CA[20] XM_005247525.1:c.165+10365CA[21] XM_005247525.1:c.165+10365CA[22]
PEX5L transcript variant X1 XM_024453590.2:c.258+10392= XM_024453590.2:c.258+10365CA[7] XM_024453590.2:c.258+10365CA[9] XM_024453590.2:c.258+10365CA[10] XM_024453590.2:c.258+10365CA[11] XM_024453590.2:c.258+10365CA[12] XM_024453590.2:c.258+10365CA[13] XM_024453590.2:c.258+10365CA[15] XM_024453590.2:c.258+10365CA[16] XM_024453590.2:c.258+10365CA[17] XM_024453590.2:c.258+10365CA[18] XM_024453590.2:c.258+10365CA[19] XM_024453590.2:c.258+10365CA[20] XM_024453590.2:c.258+10365CA[21] XM_024453590.2:c.258+10365CA[22]
PEX5L transcript variant X2 XM_024453591.2:c.165+10392= XM_024453591.2:c.165+10365CA[7] XM_024453591.2:c.165+10365CA[9] XM_024453591.2:c.165+10365CA[10] XM_024453591.2:c.165+10365CA[11] XM_024453591.2:c.165+10365CA[12] XM_024453591.2:c.165+10365CA[13] XM_024453591.2:c.165+10365CA[15] XM_024453591.2:c.165+10365CA[16] XM_024453591.2:c.165+10365CA[17] XM_024453591.2:c.165+10365CA[18] XM_024453591.2:c.165+10365CA[19] XM_024453591.2:c.165+10365CA[20] XM_024453591.2:c.165+10365CA[21] XM_024453591.2:c.165+10365CA[22]
PEX5L transcript variant X3 XM_024453592.2:c.258+10392= XM_024453592.2:c.258+10365CA[7] XM_024453592.2:c.258+10365CA[9] XM_024453592.2:c.258+10365CA[10] XM_024453592.2:c.258+10365CA[11] XM_024453592.2:c.258+10365CA[12] XM_024453592.2:c.258+10365CA[13] XM_024453592.2:c.258+10365CA[15] XM_024453592.2:c.258+10365CA[16] XM_024453592.2:c.258+10365CA[17] XM_024453592.2:c.258+10365CA[18] XM_024453592.2:c.258+10365CA[19] XM_024453592.2:c.258+10365CA[20] XM_024453592.2:c.258+10365CA[21] XM_024453592.2:c.258+10365CA[22]
PEX5L transcript variant X5 XM_024453593.2:c.258+10392= XM_024453593.2:c.258+10365CA[7] XM_024453593.2:c.258+10365CA[9] XM_024453593.2:c.258+10365CA[10] XM_024453593.2:c.258+10365CA[11] XM_024453593.2:c.258+10365CA[12] XM_024453593.2:c.258+10365CA[13] XM_024453593.2:c.258+10365CA[15] XM_024453593.2:c.258+10365CA[16] XM_024453593.2:c.258+10365CA[17] XM_024453593.2:c.258+10365CA[18] XM_024453593.2:c.258+10365CA[19] XM_024453593.2:c.258+10365CA[20] XM_024453593.2:c.258+10365CA[21] XM_024453593.2:c.258+10365CA[22]
PEX5L transcript variant X6 XM_047448297.1:c.93+10392= XM_047448297.1:c.93+10365CA[7] XM_047448297.1:c.93+10365CA[9] XM_047448297.1:c.93+10365CA[10] XM_047448297.1:c.93+10365CA[11] XM_047448297.1:c.93+10365CA[12] XM_047448297.1:c.93+10365CA[13] XM_047448297.1:c.93+10365CA[15] XM_047448297.1:c.93+10365CA[16] XM_047448297.1:c.93+10365CA[17] XM_047448297.1:c.93+10365CA[18] XM_047448297.1:c.93+10365CA[19] XM_047448297.1:c.93+10365CA[20] XM_047448297.1:c.93+10365CA[21] XM_047448297.1:c.93+10365CA[22]
PEX5L transcript variant X7 XM_047448298.1:c.93+10392= XM_047448298.1:c.93+10365CA[7] XM_047448298.1:c.93+10365CA[9] XM_047448298.1:c.93+10365CA[10] XM_047448298.1:c.93+10365CA[11] XM_047448298.1:c.93+10365CA[12] XM_047448298.1:c.93+10365CA[13] XM_047448298.1:c.93+10365CA[15] XM_047448298.1:c.93+10365CA[16] XM_047448298.1:c.93+10365CA[17] XM_047448298.1:c.93+10365CA[18] XM_047448298.1:c.93+10365CA[19] XM_047448298.1:c.93+10365CA[20] XM_047448298.1:c.93+10365CA[21] XM_047448298.1:c.93+10365CA[22]
PEX5L transcript variant X8 XM_047448299.1:c.22-73418= XM_047448299.1:c.22-73445CA[7] XM_047448299.1:c.22-73445CA[9] XM_047448299.1:c.22-73445CA[10] XM_047448299.1:c.22-73445CA[11] XM_047448299.1:c.22-73445CA[12] XM_047448299.1:c.22-73445CA[13] XM_047448299.1:c.22-73445CA[15] XM_047448299.1:c.22-73445CA[16] XM_047448299.1:c.22-73445CA[17] XM_047448299.1:c.22-73445CA[18] XM_047448299.1:c.22-73445CA[19] XM_047448299.1:c.22-73445CA[20] XM_047448299.1:c.22-73445CA[21] XM_047448299.1:c.22-73445CA[22]
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

44 SubSNP, 21 Frequency submissions
No Submitter Submission ID Date (Build)
1 ABI ss41914974 Mar 15, 2016 (147)
2 HUMANGENOME_JCVI ss95340221 Mar 15, 2016 (147)
3 PJP ss295142315 May 09, 2011 (135)
4 PJP ss295142316 Aug 21, 2014 (142)
5 BILGI_BIOE ss666238398 Apr 25, 2013 (138)
6 EVA_GENOME_DK ss1576108516 Apr 01, 2015 (144)
7 JJLAB ss2030564896 Sep 14, 2016 (149)
8 MCHAISSO ss3065921600 Jan 10, 2018 (151)
9 URBANLAB ss3647599048 Oct 12, 2018 (152)
10 EVA_DECODE ss3710940504 Jul 13, 2019 (153)
11 EVA_DECODE ss3710940505 Jul 13, 2019 (153)
12 EVA_DECODE ss3710940506 Jul 13, 2019 (153)
13 EVA_DECODE ss3710940507 Jul 13, 2019 (153)
14 EVA_DECODE ss3710940508 Jul 13, 2019 (153)
15 EVA_DECODE ss3710940509 Jul 13, 2019 (153)
16 ACPOP ss3730644927 Jul 13, 2019 (153)
17 PACBIO ss3784552143 Jul 13, 2019 (153)
18 PACBIO ss3790031508 Jul 13, 2019 (153)
19 PACBIO ss3794906202 Jul 13, 2019 (153)
20 EVA ss3828248032 Apr 25, 2020 (154)
21 KOGIC ss3953052279 Apr 25, 2020 (154)
22 GNOMAD ss4086719483 Apr 26, 2021 (155)
23 GNOMAD ss4086719484 Apr 26, 2021 (155)
24 GNOMAD ss4086719485 Apr 26, 2021 (155)
25 GNOMAD ss4086719486 Apr 26, 2021 (155)
26 GNOMAD ss4086719487 Apr 26, 2021 (155)
27 GNOMAD ss4086719488 Apr 26, 2021 (155)
28 GNOMAD ss4086719489 Apr 26, 2021 (155)
29 GNOMAD ss4086719490 Apr 26, 2021 (155)
30 GNOMAD ss4086719492 Apr 26, 2021 (155)
31 GNOMAD ss4086719493 Apr 26, 2021 (155)
32 GNOMAD ss4086719494 Apr 26, 2021 (155)
33 GNOMAD ss4086719495 Apr 26, 2021 (155)
34 GNOMAD ss4086719496 Apr 26, 2021 (155)
35 GNOMAD ss4086719497 Apr 26, 2021 (155)
36 TOPMED ss4595398580 Apr 26, 2021 (155)
37 TOMMO_GENOMICS ss5163105799 Apr 26, 2021 (155)
38 1000G_HIGH_COVERAGE ss5257205773 Oct 12, 2022 (156)
39 1000G_HIGH_COVERAGE ss5257205775 Oct 12, 2022 (156)
40 HUGCELL_USP ss5456232082 Oct 12, 2022 (156)
41 HUGCELL_USP ss5456232084 Oct 12, 2022 (156)
42 HUGCELL_USP ss5456232085 Oct 12, 2022 (156)
43 TOMMO_GENOMICS ss5696418541 Oct 12, 2022 (156)
44 EVA ss5853983248 Oct 12, 2022 (156)
45 The Danish reference pan genome NC_000003.11 - 179678990 Apr 25, 2020 (154)
46 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
47 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
48 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
49 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
50 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
51 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
52 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
53 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
54 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
55 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
56 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
57 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
58 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
59 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133683100 (NC_000003.12:179961201::TG 225/62236)
Row 133683101 (NC_000003.12:179961201::TGTG 167/62234)
Row 133683102 (NC_000003.12:179961201::TGTGTG 2551/62206)...

- Apr 26, 2021 (155)
60 Korean Genome Project NC_000003.12 - 179961206 Apr 25, 2020 (154)
61 Northern Sweden NC_000003.11 - 179678990 Jul 13, 2019 (153)
62 8.3KJPN NC_000003.11 - 179678990 Apr 26, 2021 (155)
63 14KJPN NC_000003.12 - 179961202 Oct 12, 2022 (156)
64 TopMed NC_000003.12 - 179961202 Apr 26, 2021 (155)
65 ALFA NC_000003.12 - 179961202 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs145127503 Sep 17, 2011 (135)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss4086719497 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTG:

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT

(self)
ss4086719496 NC_000003.12:179961201:TGTGTGTGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
ss3710940504, ss4086719495 NC_000003.12:179961201:TGTGTGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
ss4086719494 NC_000003.12:179961201:TGTGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3710940505 NC_000003.12:179961203:TGTGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT

(self)
ss295142315 NC_000003.10:181161683:TGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss295142316 NC_000003.10:181161708:GTGT: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
877465, 3929792, 21075106, ss666238398, ss1576108516, ss2030564896, ss3730644927, ss3784552143, ss3790031508, ss3794906202, ss3828248032, ss5163105799 NC_000003.11:179678989:TGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
30255645, 432776135, ss4086719493, ss4595398580, ss5456232082, ss5696418541, ss5853983248 NC_000003.12:179961201:TGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
9430280, ss3710940506, ss3953052279 NC_000003.12:179961205:TGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3647599048 NC_000003.12:179961225:TGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss41914974 NT_005612.16:86174159:TGTG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss95340221 NT_005612.16:86174160:GTGT: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4086719492 NC_000003.12:179961201:TG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3710940507 NC_000003.12:179961207:TG: NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss41914974 NT_005612.16:86174159:TGTG:TG NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4086719483 NC_000003.12:179961201::TG NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3710940508 NC_000003.12:179961209::TG NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4086719484, ss5257205773 NC_000003.12:179961201::TGTG NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3710940509 NC_000003.12:179961209::TGTG NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3065921600, ss4086719485, ss5257205775, ss5456232085 NC_000003.12:179961201::TGTGTG NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4086719486, ss5456232084 NC_000003.12:179961201::TGTGTGTG NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4086719487 NC_000003.12:179961201::TGTGTGTGTG NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4086719488 NC_000003.12:179961201::TGTGTGTGTG…

NC_000003.12:179961201::TGTGTGTGTGTG

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4086719489 NC_000003.12:179961201::TGTGTGTGTG…

NC_000003.12:179961201::TGTGTGTGTGTGTG

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4086719490 NC_000003.12:179961201::TGTGTGTGTG…

NC_000003.12:179961201::TGTGTGTGTGTGTGTG

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
7342032131 NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000003.12:179961201:TGTGTGTGTGT…

NC_000003.12:179961201:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs72242969

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d