Name: rs5848509
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs5848509

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:39503554-39503568 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTT / delT / dupT / dupTT / dupT…
delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₅
Variation Type: Indel Insertion and Deletion
Frequency: (T)₁₅=0.2640 (1322/5008, 1000G)
delTT=0.000 (0/158, ALFA)
delT=0.000 (0/158, ALFA) (+ 5 more)
dupT=0.000 (0/158, ALFA)
dupTT=0.000 (0/158, ALFA)
dupTTT=0.000 (0/158, ALFA)
dup(T)₄=0.000 (0/158, ALFA)
dup(T)₅=0.000 (0/158, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: MOBP : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	158	TTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
European	Sub	10	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
African	Sub	130	TTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	10	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
African American	Sub	120	TTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	6	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
East Asian	Sub	4	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Other Asian	Sub	2	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	2	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	0	TTTTTTTTTTTTTTT=0	TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
South Asian	Sub	4	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Other	Sub	6	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupT=0.7360
1000Genomes	African	Sub	1322	- No frequency provided	dupT=0.5484
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupT=0.8254
1000Genomes	Europe	Sub	1006	- No frequency provided	dupT=0.8539
1000Genomes	South Asian	Sub	978	- No frequency provided	dupT=0.715
1000Genomes	American	Sub	694	- No frequency provided	dupT=0.823
Allele Frequency Aggregator	Total	Global	158	(T)₁₅=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000
Allele Frequency Aggregator	African	Sub	130	(T)₁₅=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000
Allele Frequency Aggregator	European	Sub	10	(T)₁₅=1.0	delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0, dup(T)₄=0.0, dup(T)₅=0.0
Allele Frequency Aggregator	Other	Sub	6	(T)₁₅=1.0	delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0, dup(T)₄=0.0, dup(T)₅=0.0
Allele Frequency Aggregator	Asian	Sub	6	(T)₁₅=1.0	delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0, dup(T)₄=0.0, dup(T)₅=0.0
Allele Frequency Aggregator	South Asian	Sub	4	(T)₁₅=1.0	delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0, dup(T)₄=0.0, dup(T)₅=0.0
Allele Frequency Aggregator	Latin American 1	Sub	2	(T)₁₅=1.0	delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0, dup(T)₄=0.0, dup(T)₅=0.0
Allele Frequency Aggregator	Latin American 2	Sub	0	(T)₁₅=0	delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)₄=0, dup(T)₅=0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.39503567_39503568del
GRCh38.p14 chr 3	NC_000003.12:g.39503568del
GRCh38.p14 chr 3	NC_000003.12:g.39503568dup
GRCh38.p14 chr 3	NC_000003.12:g.39503567_39503568dup
GRCh38.p14 chr 3	NC_000003.12:g.39503566_39503568dup
GRCh38.p14 chr 3	NC_000003.12:g.39503565_39503568dup
GRCh38.p14 chr 3	NC_000003.12:g.39503564_39503568dup
GRCh37.p13 chr 3	NC_000003.11:g.39545058_39545059del
GRCh37.p13 chr 3	NC_000003.11:g.39545059del
GRCh37.p13 chr 3	NC_000003.11:g.39545059dup
GRCh37.p13 chr 3	NC_000003.11:g.39545058_39545059dup
GRCh37.p13 chr 3	NC_000003.11:g.39545057_39545059dup
GRCh37.p13 chr 3	NC_000003.11:g.39545056_39545059dup
GRCh37.p13 chr 3	NC_000003.11:g.39545055_39545059dup

Gene: MOBP, myelin associated oligodendrocyte basic protein (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
MOBP transcript variant 1	NM_001278322.2:c.620+691_… NM_001278322.2:c.620+691_620+692del	N/A	Intron Variant
MOBP transcript variant 3	NM_182935.4:c.206+1292_20… NM_182935.4:c.206+1292_206+1293del	N/A	Intron Variant
MOBP transcript variant 2	NM_001278323.2:c.	N/A	Genic Downstream Transcript Variant
MOBP transcript variant 8	NM_001393704.1:c.	N/A	Genic Downstream Transcript Variant
MOBP transcript variant 4	NR_003090.3:n.	N/A	Intron Variant
MOBP transcript variant 5	NR_103504.2:n.	N/A	Intron Variant
MOBP transcript variant 6	NR_103505.2:n.	N/A	Intron Variant
MOBP transcript variant 7	NR_103506.2:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₅=	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₅
GRCh38.p14 chr 3	NC_000003.12:g.39503554_39503568=	NC_000003.12:g.39503567_39503568del	NC_000003.12:g.39503568del	NC_000003.12:g.39503568dup	NC_000003.12:g.39503567_39503568dup	NC_000003.12:g.39503566_39503568dup	NC_000003.12:g.39503565_39503568dup	NC_000003.12:g.39503564_39503568dup
GRCh37.p13 chr 3	NC_000003.11:g.39545045_39545059=	NC_000003.11:g.39545058_39545059del	NC_000003.11:g.39545059del	NC_000003.11:g.39545059dup	NC_000003.11:g.39545058_39545059dup	NC_000003.11:g.39545057_39545059dup	NC_000003.11:g.39545056_39545059dup	NC_000003.11:g.39545055_39545059dup
MOBP transcript variant 1	NM_001278322.1:c.620+678=	NM_001278322.1:c.620+691_620+692del	NM_001278322.1:c.620+692del	NM_001278322.1:c.620+692dup	NM_001278322.1:c.620+691_620+692dup	NM_001278322.1:c.620+690_620+692dup	NM_001278322.1:c.620+689_620+692dup	NM_001278322.1:c.620+688_620+692dup
MOBP transcript variant 1	NM_001278322.2:c.620+678=	NM_001278322.2:c.620+691_620+692del	NM_001278322.2:c.620+692del	NM_001278322.2:c.620+692dup	NM_001278322.2:c.620+691_620+692dup	NM_001278322.2:c.620+690_620+692dup	NM_001278322.2:c.620+689_620+692dup	NM_001278322.2:c.620+688_620+692dup
MOBP transcript variant 3	NM_182935.3:c.206+1279=	NM_182935.3:c.206+1292_206+1293del	NM_182935.3:c.206+1293del	NM_182935.3:c.206+1293dup	NM_182935.3:c.206+1292_206+1293dup	NM_182935.3:c.206+1291_206+1293dup	NM_182935.3:c.206+1290_206+1293dup	NM_182935.3:c.206+1289_206+1293dup
MOBP transcript variant 3	NM_182935.4:c.206+1279=	NM_182935.4:c.206+1292_206+1293del	NM_182935.4:c.206+1293del	NM_182935.4:c.206+1293dup	NM_182935.4:c.206+1292_206+1293dup	NM_182935.4:c.206+1291_206+1293dup	NM_182935.4:c.206+1290_206+1293dup	NM_182935.4:c.206+1289_206+1293dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

55 SubSNP, 19 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42012112	Mar 13, 2006 (138)
2	ABI	ss42099534	Mar 13, 2006 (138)
3	HGSV	ss80520266	Dec 15, 2007 (144)
4	HGSV	ss82397782	Dec 14, 2007 (130)
5	HUMANGENOME_JCVI	ss95315018	Feb 06, 2009 (130)
6	PJP	ss295096203	May 09, 2011 (137)
7	PJP	ss295096204	Jan 10, 2018 (151)
8	SSMP	ss663407179	Apr 01, 2015 (144)
9	BILGI_BIOE	ss666203804	Apr 25, 2013 (138)
10	1000GENOMES	ss1370236291	Aug 21, 2014 (142)
11	DDI	ss1536349396	Apr 01, 2015 (144)
12	HAMMER_LAB	ss1799166954	Sep 08, 2015 (146)
13	MCHAISSO	ss3065876397	Nov 08, 2017 (151)
14	EVA_DECODE	ss3709051792	Jul 13, 2019 (153)
15	EVA_DECODE	ss3709051793	Jul 13, 2019 (153)
16	EVA_DECODE	ss3709051794	Jul 13, 2019 (153)
17	EVA_DECODE	ss3709051795	Jul 13, 2019 (153)
18	PACBIO	ss3784289438	Jul 13, 2019 (153)
19	PACBIO	ss3789809982	Jul 13, 2019 (153)
20	PACBIO	ss3789809983	Jul 13, 2019 (153)
21	PACBIO	ss3794683797	Jul 13, 2019 (153)
22	PACBIO	ss3794683798	Jul 13, 2019 (153)
23	KHV_HUMAN_GENOMES	ss3803066395	Jul 13, 2019 (153)
24	EVA	ss3827766649	Apr 25, 2020 (154)
25	KOGIC	ss3951064271	Apr 25, 2020 (154)
26	KOGIC	ss3951064272	Apr 25, 2020 (154)
27	KOGIC	ss3951064273	Apr 25, 2020 (154)
28	GNOMAD	ss4069423134	Apr 26, 2021 (155)
29	GNOMAD	ss4069423135	Apr 26, 2021 (155)
30	GNOMAD	ss4069423136	Apr 26, 2021 (155)
31	GNOMAD	ss4069423137	Apr 26, 2021 (155)
32	GNOMAD	ss4069423139	Apr 26, 2021 (155)
33	GNOMAD	ss4069423140	Apr 26, 2021 (155)
34	TOMMO_GENOMICS	ss5158729028	Apr 26, 2021 (155)
35	TOMMO_GENOMICS	ss5158729029	Apr 26, 2021 (155)
36	TOMMO_GENOMICS	ss5158729030	Apr 26, 2021 (155)
37	TOMMO_GENOMICS	ss5158729031	Apr 26, 2021 (155)
38	1000G_HIGH_COVERAGE	ss5253768903	Oct 13, 2022 (156)
39	1000G_HIGH_COVERAGE	ss5253768904	Oct 13, 2022 (156)
40	1000G_HIGH_COVERAGE	ss5253768905	Oct 13, 2022 (156)
41	1000G_HIGH_COVERAGE	ss5253768906	Oct 13, 2022 (156)
42	1000G_HIGH_COVERAGE	ss5253768908	Oct 13, 2022 (156)
43	HUGCELL_USP	ss5453195859	Oct 13, 2022 (156)
44	HUGCELL_USP	ss5453195860	Oct 13, 2022 (156)
45	HUGCELL_USP	ss5453195861	Oct 13, 2022 (156)
46	HUGCELL_USP	ss5453195862	Oct 13, 2022 (156)
47	TOMMO_GENOMICS	ss5690257167	Oct 13, 2022 (156)
48	TOMMO_GENOMICS	ss5690257168	Oct 13, 2022 (156)
49	TOMMO_GENOMICS	ss5690257169	Oct 13, 2022 (156)
50	TOMMO_GENOMICS	ss5690257171	Oct 13, 2022 (156)
51	EVA	ss5825631497	Oct 13, 2022 (156)
52	EVA	ss5825631498	Oct 13, 2022 (156)
53	EVA	ss5825631499	Oct 13, 2022 (156)
54	EVA	ss5853578367	Oct 13, 2022 (156)
55	EVA	ss5868466174	Oct 13, 2022 (156)
56	1000Genomes	NC_000003.11 - 39545045	Oct 12, 2018 (152)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 105045374 (NC_000003.12:39503553::T 70306/126386) Row 105045375 (NC_000003.12:39503553::TT 35434/126470) Row 105045376 (NC_000003.12:39503553::TTT 3115/126554)...	-	Apr 26, 2021 (155)
58	gnomAD - Genomes Submission ignored due to conflicting rows: Row 105045374 (NC_000003.12:39503553::T 70306/126386) Row 105045375 (NC_000003.12:39503553::TT 35434/126470) Row 105045376 (NC_000003.12:39503553::TTT 3115/126554)...	-	Apr 26, 2021 (155)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 105045374 (NC_000003.12:39503553::T 70306/126386) Row 105045375 (NC_000003.12:39503553::TT 35434/126470) Row 105045376 (NC_000003.12:39503553::TTT 3115/126554)...	-	Apr 26, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 105045374 (NC_000003.12:39503553::T 70306/126386) Row 105045375 (NC_000003.12:39503553::TT 35434/126470) Row 105045376 (NC_000003.12:39503553::TTT 3115/126554)...	-	Apr 26, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 105045374 (NC_000003.12:39503553::T 70306/126386) Row 105045375 (NC_000003.12:39503553::TT 35434/126470) Row 105045376 (NC_000003.12:39503553::TTT 3115/126554)...	-	Apr 26, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 105045374 (NC_000003.12:39503553::T 70306/126386) Row 105045375 (NC_000003.12:39503553::TT 35434/126470) Row 105045376 (NC_000003.12:39503553::TTT 3115/126554)...	-	Apr 26, 2021 (155)
63	Korean Genome Project Submission ignored due to conflicting rows: Row 7442272 (NC_000003.12:39503553::T 1164/1826) Row 7442273 (NC_000003.12:39503553::TT 398/1826) Row 7442274 (NC_000003.12:39503553::TTT 15/1826)	-	Apr 25, 2020 (154)
64	Korean Genome Project Submission ignored due to conflicting rows: Row 7442272 (NC_000003.12:39503553::T 1164/1826) Row 7442273 (NC_000003.12:39503553::TT 398/1826) Row 7442274 (NC_000003.12:39503553::TTT 15/1826)	-	Apr 25, 2020 (154)
65	Korean Genome Project Submission ignored due to conflicting rows: Row 7442272 (NC_000003.12:39503553::T 1164/1826) Row 7442273 (NC_000003.12:39503553::TT 398/1826) Row 7442274 (NC_000003.12:39503553::TTT 15/1826)	-	Apr 25, 2020 (154)
66	8.3KJPN Submission ignored due to conflicting rows: Row 16698335 (NC_000003.11:39545044::TT 4598/16660) Row 16698336 (NC_000003.11:39545044::T 10857/16660) Row 16698337 (NC_000003.11:39545044::TTT 29/16660)...	-	Apr 26, 2021 (155)
67	8.3KJPN Submission ignored due to conflicting rows: Row 16698335 (NC_000003.11:39545044::TT 4598/16660) Row 16698336 (NC_000003.11:39545044::T 10857/16660) Row 16698337 (NC_000003.11:39545044::TTT 29/16660)...	-	Apr 26, 2021 (155)
68	8.3KJPN Submission ignored due to conflicting rows: Row 16698335 (NC_000003.11:39545044::TT 4598/16660) Row 16698336 (NC_000003.11:39545044::T 10857/16660) Row 16698337 (NC_000003.11:39545044::TTT 29/16660)...	-	Apr 26, 2021 (155)
69	8.3KJPN Submission ignored due to conflicting rows: Row 16698335 (NC_000003.11:39545044::TT 4598/16660) Row 16698336 (NC_000003.11:39545044::T 10857/16660) Row 16698337 (NC_000003.11:39545044::TTT 29/16660)...	-	Apr 26, 2021 (155)
70	14KJPN Submission ignored due to conflicting rows: Row 24094271 (NC_000003.12:39503553::T 18513/28252) Row 24094272 (NC_000003.12:39503553::TT 7751/28252) Row 24094273 (NC_000003.12:39503553:T: 9/28252)...	-	Oct 13, 2022 (156)
71	14KJPN Submission ignored due to conflicting rows: Row 24094271 (NC_000003.12:39503553::T 18513/28252) Row 24094272 (NC_000003.12:39503553::TT 7751/28252) Row 24094273 (NC_000003.12:39503553:T: 9/28252)...	-	Oct 13, 2022 (156)
72	14KJPN Submission ignored due to conflicting rows: Row 24094271 (NC_000003.12:39503553::T 18513/28252) Row 24094272 (NC_000003.12:39503553::TT 7751/28252) Row 24094273 (NC_000003.12:39503553:T: 9/28252)...	-	Oct 13, 2022 (156)
73	14KJPN Submission ignored due to conflicting rows: Row 24094271 (NC_000003.12:39503553::T 18513/28252) Row 24094272 (NC_000003.12:39503553::TT 7751/28252) Row 24094273 (NC_000003.12:39503553:T: 9/28252)...	-	Oct 13, 2022 (156)
74	ALFA	NC_000003.12 - 39503554	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs5848510	May 11, 2012 (137)
rs33947576	May 15, 2013 (138)
rs63000160	May 11, 2012 (137)
rs66672776	May 11, 2012 (137)
rs66672777	Feb 26, 2009 (130)
rs66672778	Feb 26, 2009 (130)
rs66672779	Feb 26, 2009 (130)
rs67429103	Jul 30, 2012 (137)
rs67429104	Feb 27, 2009 (130)
rs67429105	Feb 27, 2009 (130)
rs71732456	May 11, 2012 (137)
rs72303885	May 11, 2012 (137)
rs141772523	May 11, 2012 (137)
rs56700809	May 27, 2008 (130)
rs59298801	Jul 01, 2015 (144)
rs71825019	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4069423140	NC_000003.12:39503553:TT:	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
10065679551	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss80520266	NC_000003.9:39520062:T:	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss5158729031	NC_000003.11:39545044:T:	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3065876397, ss3709051792, ss4069423139, ss5253768905, ss5453195859, ss5690257169, ss5868466174	NC_000003.12:39503553:T:	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
10065679551	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss295096204	NC_000003.10:39520063::T	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
14810765, ss663407179, ss1370236291, ss1799166954, ss3789809982, ss3794683797, ss5158729029, ss5825631497	NC_000003.11:39545044::T	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3803066395, ss3951064271, ss4069423134, ss5253768903, ss5453195860, ss5690257167, ss5853578367	NC_000003.12:39503553::T	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
10065679551	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3709051793	NC_000003.12:39503554::T	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss42012112, ss42099534	NT_022517.18:39485044::T	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss95315018	NT_022517.18:39485059::T	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss295096203	NC_000003.10:39520049::TT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss666203804, ss1536349396, ss3784289438, ss3789809983, ss3794683798, ss3827766649, ss5158729028, ss5825631498	NC_000003.11:39545044::TT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3951064272, ss4069423135, ss5253768904, ss5453195861, ss5690257168	NC_000003.12:39503553::TT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
10065679551	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3709051794	NC_000003.12:39503554::TT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss82397782	NT_022517.18:39485059::TT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss5158729030, ss5825631499	NC_000003.11:39545044::TTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3951064273, ss4069423136, ss5253768906, ss5453195862, ss5690257171	NC_000003.12:39503553::TTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
10065679551	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3709051795	NC_000003.12:39503554::TTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4069423137, ss5253768908	NC_000003.12:39503553::TTTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
10065679551	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
10065679551	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	NC_000003.12:39503553:TTTTTTTTTTTT… NC_000003.12:39503553:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs5848509

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs5848509