Name: rs5840835
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs5840835

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr20:19230662-19230669 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delGGG / delGG / delG / dupG / dup…
delGGG / delGG / delG / dupG / dupGG / dupGGG / dup(G)₄ / dup(G)₅
Variation Type: Indel Insertion and Deletion
Frequency: dupG=0.2005 (1004/5008, 1000G)
delGG=0.0000 (0/2694, ALFA)
delG=0.0000 (0/2694, ALFA) (+ 5 more)
dupG=0.0000 (0/2694, ALFA)
dupGG=0.0000 (0/2694, ALFA)
dupGGG=0.0000 (0/2694, ALFA)
dup(G)₄=0.0000 (0/2694, ALFA)
dup(G)₅=0.0000 (0/2694, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SLC24A3 : Intron Variant
LOC124904879 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	2694	GGGGGGGG=1.0000	GGGGGG=0.0000, GGGGGGG=0.0000, GGGGGGGGG=0.0000, GGGGGGGGGG=0.0000, GGGGGGGGGGG=0.0000, GGGGGGGGGGGG=0.0000, GGGGGGGGGGGGG=0.0000	1.0	0.0	0.0	N/A
European	Sub	1924	GGGGGGGG=1.0000	GGGGGG=0.0000, GGGGGGG=0.0000, GGGGGGGGG=0.0000, GGGGGGGGGG=0.0000, GGGGGGGGGGG=0.0000, GGGGGGGGGGGG=0.0000, GGGGGGGGGGGGG=0.0000	1.0	0.0	0.0	N/A
African	Sub	564	GGGGGGGG=1.000	GGGGGG=0.000, GGGGGGG=0.000, GGGGGGGGG=0.000, GGGGGGGGGG=0.000, GGGGGGGGGGG=0.000, GGGGGGGGGGGG=0.000, GGGGGGGGGGGGG=0.000	1.0	0.0	0.0	N/A
African Others	Sub	28	GGGGGGGG=1.00	GGGGGG=0.00, GGGGGGG=0.00, GGGGGGGGG=0.00, GGGGGGGGGG=0.00, GGGGGGGGGGG=0.00, GGGGGGGGGGGG=0.00, GGGGGGGGGGGGG=0.00	1.0	0.0	0.0	N/A
African American	Sub	536	GGGGGGGG=1.000	GGGGGG=0.000, GGGGGGG=0.000, GGGGGGGGG=0.000, GGGGGGGGGG=0.000, GGGGGGGGGGG=0.000, GGGGGGGGGGGG=0.000, GGGGGGGGGGGGG=0.000	1.0	0.0	0.0	N/A
Asian	Sub	0	GGGGGGGG=0	GGGGGG=0, GGGGGGG=0, GGGGGGGGG=0, GGGGGGGGGG=0, GGGGGGGGGGG=0, GGGGGGGGGGGG=0, GGGGGGGGGGGGG=0	0	0	0	N/A
East Asian	Sub	0	GGGGGGGG=0	GGGGGG=0, GGGGGGG=0, GGGGGGGGG=0, GGGGGGGGGG=0, GGGGGGGGGGG=0, GGGGGGGGGGGG=0, GGGGGGGGGGGGG=0	0	0	0	N/A
Other Asian	Sub	0	GGGGGGGG=0	GGGGGG=0, GGGGGGG=0, GGGGGGGGG=0, GGGGGGGGGG=0, GGGGGGGGGGG=0, GGGGGGGGGGGG=0, GGGGGGGGGGGGG=0	0	0	0	N/A
Latin American 1	Sub	30	GGGGGGGG=1.00	GGGGGG=0.00, GGGGGGG=0.00, GGGGGGGGG=0.00, GGGGGGGGGG=0.00, GGGGGGGGGGG=0.00, GGGGGGGGGGGG=0.00, GGGGGGGGGGGGG=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	54	GGGGGGGG=1.00	GGGGGG=0.00, GGGGGGG=0.00, GGGGGGGGG=0.00, GGGGGGGGGG=0.00, GGGGGGGGGGG=0.00, GGGGGGGGGGGG=0.00, GGGGGGGGGGGGG=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	20	GGGGGGGG=1.00	GGGGGG=0.00, GGGGGGG=0.00, GGGGGGGGG=0.00, GGGGGGGGGG=0.00, GGGGGGGGGGG=0.00, GGGGGGGGGGGG=0.00, GGGGGGGGGGGGG=0.00	1.0	0.0	0.0	N/A
Other	Sub	102	GGGGGGGG=1.000	GGGGGG=0.000, GGGGGGG=0.000, GGGGGGGGG=0.000, GGGGGGGGGG=0.000, GGGGGGGGGGG=0.000, GGGGGGGGGGGG=0.000, GGGGGGGGGGGGG=0.000	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupG=0.2005, dupGG=0.0513
1000Genomes	African	Sub	1322	- No frequency provided	dupG=0.1536, dupGG=0.0719
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupG=0.5546, dupGG=0.0119
1000Genomes	Europe	Sub	1006	- No frequency provided	dupG=0.0089, dupGG=0.0815
1000Genomes	South Asian	Sub	978	- No frequency provided	dupG=0.069, dupGG=0.032
1000Genomes	American	Sub	694	- No frequency provided	dupG=0.239, dupGG=0.053
Allele Frequency Aggregator	Total	Global	2694	(G)₈=1.0000	delGG=0.0000, delG=0.0000, dupG=0.0000, dupGG=0.0000, dupGGG=0.0000, dup(G)₄=0.0000, dup(G)₅=0.0000
Allele Frequency Aggregator	European	Sub	1924	(G)₈=1.0000	delGG=0.0000, delG=0.0000, dupG=0.0000, dupGG=0.0000, dupGGG=0.0000, dup(G)₄=0.0000, dup(G)₅=0.0000
Allele Frequency Aggregator	African	Sub	564	(G)₈=1.000	delGG=0.000, delG=0.000, dupG=0.000, dupGG=0.000, dupGGG=0.000, dup(G)₄=0.000, dup(G)₅=0.000
Allele Frequency Aggregator	Other	Sub	102	(G)₈=1.000	delGG=0.000, delG=0.000, dupG=0.000, dupGG=0.000, dupGGG=0.000, dup(G)₄=0.000, dup(G)₅=0.000
Allele Frequency Aggregator	Latin American 2	Sub	54	(G)₈=1.00	delGG=0.00, delG=0.00, dupG=0.00, dupGG=0.00, dupGGG=0.00, dup(G)₄=0.00, dup(G)₅=0.00
Allele Frequency Aggregator	Latin American 1	Sub	30	(G)₈=1.00	delGG=0.00, delG=0.00, dupG=0.00, dupGG=0.00, dupGGG=0.00, dup(G)₄=0.00, dup(G)₅=0.00
Allele Frequency Aggregator	South Asian	Sub	20	(G)₈=1.00	delGG=0.00, delG=0.00, dupG=0.00, dupGG=0.00, dupGGG=0.00, dup(G)₄=0.00, dup(G)₅=0.00
Allele Frequency Aggregator	Asian	Sub	0	(G)₈=0	delGG=0, delG=0, dupG=0, dupGG=0, dupGGG=0, dup(G)₄=0, dup(G)₅=0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 20	NC_000020.11:g.19230667_19230669del
GRCh38.p14 chr 20	NC_000020.11:g.19230668_19230669del
GRCh38.p14 chr 20	NC_000020.11:g.19230669del
GRCh38.p14 chr 20	NC_000020.11:g.19230669dup
GRCh38.p14 chr 20	NC_000020.11:g.19230668_19230669dup
GRCh38.p14 chr 20	NC_000020.11:g.19230667_19230669dup
GRCh38.p14 chr 20	NC_000020.11:g.19230666_19230669dup
GRCh38.p14 chr 20	NC_000020.11:g.19230665_19230669dup
GRCh37.p13 chr 20	NC_000020.10:g.19211311_19211313del
GRCh37.p13 chr 20	NC_000020.10:g.19211312_19211313del
GRCh37.p13 chr 20	NC_000020.10:g.19211313del
GRCh37.p13 chr 20	NC_000020.10:g.19211313dup
GRCh37.p13 chr 20	NC_000020.10:g.19211312_19211313dup
GRCh37.p13 chr 20	NC_000020.10:g.19211311_19211313dup
GRCh37.p13 chr 20	NC_000020.10:g.19211310_19211313dup
GRCh37.p13 chr 20	NC_000020.10:g.19211309_19211313dup

Gene: SLC24A3, solute carrier family 24 member 3 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SLC24A3 transcript	NM_020689.4:c.142+17683_1… NM_020689.4:c.142+17683_142+17685del	N/A	Intron Variant

Gene: LOC124904879, uncharacterized LOC124904879 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC124904879 transcript variant X2	XR_007067552.1:n.	N/A	Intron Variant
LOC124904879 transcript variant X1	XR_007067551.1:n.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(G)₈=	delGGG	delGG	delG	dupG	dupGG	dupGGG	dup(G)₄	dup(G)₅
GRCh38.p14 chr 20	NC_000020.11:g.19230662_19230669=	NC_000020.11:g.19230667_19230669del	NC_000020.11:g.19230668_19230669del	NC_000020.11:g.19230669del	NC_000020.11:g.19230669dup	NC_000020.11:g.19230668_19230669dup	NC_000020.11:g.19230667_19230669dup	NC_000020.11:g.19230666_19230669dup	NC_000020.11:g.19230665_19230669dup
GRCh37.p13 chr 20	NC_000020.10:g.19211306_19211313=	NC_000020.10:g.19211311_19211313del	NC_000020.10:g.19211312_19211313del	NC_000020.10:g.19211313del	NC_000020.10:g.19211313dup	NC_000020.10:g.19211312_19211313dup	NC_000020.10:g.19211311_19211313dup	NC_000020.10:g.19211310_19211313dup	NC_000020.10:g.19211309_19211313dup
SLC24A3 transcript	NM_020689.3:c.142+17678=	NM_020689.3:c.142+17683_142+17685del	NM_020689.3:c.142+17684_142+17685del	NM_020689.3:c.142+17685del	NM_020689.3:c.142+17685dup	NM_020689.3:c.142+17684_142+17685dup	NM_020689.3:c.142+17683_142+17685dup	NM_020689.3:c.142+17682_142+17685dup	NM_020689.3:c.142+17681_142+17685dup
SLC24A3 transcript	NM_020689.4:c.142+17678=	NM_020689.4:c.142+17683_142+17685del	NM_020689.4:c.142+17684_142+17685del	NM_020689.4:c.142+17685del	NM_020689.4:c.142+17685dup	NM_020689.4:c.142+17684_142+17685dup	NM_020689.4:c.142+17683_142+17685dup	NM_020689.4:c.142+17682_142+17685dup	NM_020689.4:c.142+17681_142+17685dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

72 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss80505967	Oct 12, 2018 (152)
2	HGSV	ss82188530	Sep 08, 2015 (146)
3	HUMANGENOME_JCVI	ss95737642	Dec 05, 2013 (138)
4	IGMI-SNU	ss115489872	Oct 12, 2018 (152)
5	BUSHMAN	ss193606585	Jul 04, 2010 (135)
6	GMI	ss288534421	Oct 12, 2018 (152)
7	GMI	ss289405446	May 04, 2012 (137)
8	GMI	ss289405447	May 04, 2012 (138)
9	PJP	ss295042521	May 09, 2011 (138)
10	PJP	ss295042522	May 09, 2011 (134)
11	1000GENOMES	ss327935408	May 09, 2011 (135)
12	1000GENOMES	ss328055132	May 09, 2011 (135)
13	1000GENOMES	ss328291540	Jan 10, 2018 (151)
14	LUNTER	ss552653950	Apr 25, 2013 (138)
15	LUNTER	ss553051382	Apr 25, 2013 (138)
16	LUNTER	ss553675412	Apr 25, 2013 (138)
17	TISHKOFF	ss554978853	Apr 25, 2013 (138)
18	TISHKOFF	ss554978855	Apr 25, 2013 (138)
19	TISHKOFF	ss565934423	Oct 12, 2018 (152)
20	SSMP	ss664465754	Apr 01, 2015 (144)
21	BILGI_BIOE	ss666742185	Apr 25, 2013 (138)
22	1000GENOMES	ss1378423632	Aug 21, 2014 (142)
23	1000GENOMES	ss1378423636	Aug 21, 2014 (142)
24	EVA_UK10K_ALSPAC	ss1709319514	Apr 01, 2015 (144)
25	EVA_UK10K_TWINSUK	ss1709320021	Apr 01, 2015 (144)
26	EVA_UK10K_TWINSUK	ss1710808659	Oct 12, 2018 (152)
27	EVA_UK10K_ALSPAC	ss1710808660	Oct 12, 2018 (152)
28	HAMMER_LAB	ss1809451572	Sep 08, 2015 (146)
29	HAMMER_LAB	ss1809451573	Sep 08, 2015 (146)
30	SYSTEMSBIOZJU	ss2629417117	Jan 10, 2018 (151)
31	MCHAISSO	ss3064849240	Nov 08, 2017 (151)
32	BEROUKHIMLAB	ss3644444494	Oct 12, 2018 (152)
33	URBANLAB	ss3650986723	Oct 12, 2018 (152)
34	EVA_DECODE	ss3706688179	Jul 13, 2019 (153)
35	EVA_DECODE	ss3706688180	Jul 13, 2019 (153)
36	EVA_DECODE	ss3706688181	Jul 13, 2019 (153)
37	EVA_DECODE	ss3706688182	Jul 13, 2019 (153)
38	EVA_DECODE	ss3706688183	Jul 13, 2019 (153)
39	ACPOP	ss3743307926	Jul 13, 2019 (153)
40	ACPOP	ss3743307927	Jul 13, 2019 (153)
41	ACPOP	ss3743307928	Jul 13, 2019 (153)
42	PACBIO	ss3788617560	Jul 13, 2019 (153)
43	PACBIO	ss3793515338	Jul 13, 2019 (153)
44	PACBIO	ss3798402511	Jul 13, 2019 (153)
45	KHV_HUMAN_GENOMES	ss3821675081	Jul 13, 2019 (153)
46	KHV_HUMAN_GENOMES	ss3821675082	Jul 13, 2019 (153)
47	EVA	ss3835623161	Apr 27, 2020 (154)
48	EVA	ss3841438027	Apr 27, 2020 (154)
49	EVA	ss3846946107	Apr 27, 2020 (154)
50	GNOMAD	ss4336150040	Apr 26, 2021 (155)
51	GNOMAD	ss4336150041	Apr 26, 2021 (155)
52	GNOMAD	ss4336150042	Apr 26, 2021 (155)
53	GNOMAD	ss4336150045	Apr 26, 2021 (155)
54	TOMMO_GENOMICS	ss5229125328	Apr 26, 2021 (155)
55	TOMMO_GENOMICS	ss5229125329	Apr 26, 2021 (155)
56	TOMMO_GENOMICS	ss5229125330	Apr 26, 2021 (155)
57	TOMMO_GENOMICS	ss5229125331	Apr 26, 2021 (155)
58	1000G_HIGH_COVERAGE	ss5308307002	Oct 13, 2022 (156)
59	1000G_HIGH_COVERAGE	ss5308307003	Oct 13, 2022 (156)
60	1000G_HIGH_COVERAGE	ss5308307004	Oct 13, 2022 (156)
61	1000G_HIGH_COVERAGE	ss5308307005	Oct 13, 2022 (156)
62	HUGCELL_USP	ss5500688475	Oct 13, 2022 (156)
63	HUGCELL_USP	ss5500688476	Oct 13, 2022 (156)
64	HUGCELL_USP	ss5500688477	Oct 13, 2022 (156)
65	HUGCELL_USP	ss5500688478	Oct 13, 2022 (156)
66	TOMMO_GENOMICS	ss5788191908	Oct 13, 2022 (156)
67	TOMMO_GENOMICS	ss5788191909	Oct 13, 2022 (156)
68	TOMMO_GENOMICS	ss5788191910	Oct 13, 2022 (156)
69	TOMMO_GENOMICS	ss5788191911	Oct 13, 2022 (156)
70	EVA	ss5845535591	Oct 13, 2022 (156)
71	EVA	ss5845535592	Oct 13, 2022 (156)
72	EVA	ss5845535593	Oct 13, 2022 (156)
73	1000Genomes	NC_000020.10 - 19211306	Oct 12, 2018 (152)
74	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 43058577 (NC_000020.10:19211305::GG 422/3854) Row 43058578 (NC_000020.10:19211305:G: 1029/3854)	-	Oct 12, 2018 (152)
75	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 43058577 (NC_000020.10:19211305::GG 422/3854) Row 43058578 (NC_000020.10:19211305:G: 1029/3854)	-	Oct 12, 2018 (152)
76	gnomAD - Genomes Submission ignored due to conflicting rows: Row 548299410 (NC_000020.11:19230661::G 11137/96350) Row 548299411 (NC_000020.11:19230661::GG 7756/96164) Row 548299412 (NC_000020.11:19230661::GGGG 10/96634)...	-	Apr 26, 2021 (155)
77	gnomAD - Genomes Submission ignored due to conflicting rows: Row 548299410 (NC_000020.11:19230661::G 11137/96350) Row 548299411 (NC_000020.11:19230661::GG 7756/96164) Row 548299412 (NC_000020.11:19230661::GGGG 10/96634)...	-	Apr 26, 2021 (155)
78	gnomAD - Genomes Submission ignored due to conflicting rows: Row 548299410 (NC_000020.11:19230661::G 11137/96350) Row 548299411 (NC_000020.11:19230661::GG 7756/96164) Row 548299412 (NC_000020.11:19230661::GGGG 10/96634)...	-	Apr 26, 2021 (155)
79	gnomAD - Genomes Submission ignored due to conflicting rows: Row 548299410 (NC_000020.11:19230661::G 11137/96350) Row 548299411 (NC_000020.11:19230661::GG 7756/96164) Row 548299412 (NC_000020.11:19230661::GGGG 10/96634)...	-	Apr 26, 2021 (155)
80	gnomAD - Genomes Submission ignored due to conflicting rows: Row 548299410 (NC_000020.11:19230661::G 11137/96350) Row 548299411 (NC_000020.11:19230661::GG 7756/96164) Row 548299412 (NC_000020.11:19230661::GGGG 10/96634)...	-	Apr 26, 2021 (155)
81	Northern Sweden Submission ignored due to conflicting rows: Row 16592791 (NC_000020.10:19211305::G 11/594) Row 16592792 (NC_000020.10:19211305:G: 109/594) Row 16592793 (NC_000020.10:19211305::GG 49/594)	-	Jul 13, 2019 (153)
82	Northern Sweden Submission ignored due to conflicting rows: Row 16592791 (NC_000020.10:19211305::G 11/594) Row 16592792 (NC_000020.10:19211305:G: 109/594) Row 16592793 (NC_000020.10:19211305::GG 49/594)	-	Jul 13, 2019 (153)
83	Northern Sweden Submission ignored due to conflicting rows: Row 16592791 (NC_000020.10:19211305::G 11/594) Row 16592792 (NC_000020.10:19211305:G: 109/594) Row 16592793 (NC_000020.10:19211305::GG 49/594)	-	Jul 13, 2019 (153)
84	8.3KJPN Submission ignored due to conflicting rows: Row 87094635 (NC_000020.10:19211305::G 11607/16660) Row 87094636 (NC_000020.10:19211305::GG 212/16660) Row 87094637 (NC_000020.10:19211305:G: 767/16660)...	-	Apr 26, 2021 (155)
85	8.3KJPN Submission ignored due to conflicting rows: Row 87094635 (NC_000020.10:19211305::G 11607/16660) Row 87094636 (NC_000020.10:19211305::GG 212/16660) Row 87094637 (NC_000020.10:19211305:G: 767/16660)...	-	Apr 26, 2021 (155)
86	8.3KJPN Submission ignored due to conflicting rows: Row 87094635 (NC_000020.10:19211305::G 11607/16660) Row 87094636 (NC_000020.10:19211305::GG 212/16660) Row 87094637 (NC_000020.10:19211305:G: 767/16660)...	-	Apr 26, 2021 (155)
87	8.3KJPN Submission ignored due to conflicting rows: Row 87094635 (NC_000020.10:19211305::G 11607/16660) Row 87094636 (NC_000020.10:19211305::GG 212/16660) Row 87094637 (NC_000020.10:19211305:G: 767/16660)...	-	Apr 26, 2021 (155)
88	14KJPN Submission ignored due to conflicting rows: Row 122029012 (NC_000020.11:19230661::G 19498/28236) Row 122029013 (NC_000020.11:19230661:G: 1297/28236) Row 122029014 (NC_000020.11:19230661::GG 366/28236)...	-	Oct 13, 2022 (156)
89	14KJPN Submission ignored due to conflicting rows: Row 122029012 (NC_000020.11:19230661::G 19498/28236) Row 122029013 (NC_000020.11:19230661:G: 1297/28236) Row 122029014 (NC_000020.11:19230661::GG 366/28236)...	-	Oct 13, 2022 (156)
90	14KJPN Submission ignored due to conflicting rows: Row 122029012 (NC_000020.11:19230661::G 19498/28236) Row 122029013 (NC_000020.11:19230661:G: 1297/28236) Row 122029014 (NC_000020.11:19230661::GG 366/28236)...	-	Oct 13, 2022 (156)
91	14KJPN Submission ignored due to conflicting rows: Row 122029012 (NC_000020.11:19230661::G 19498/28236) Row 122029013 (NC_000020.11:19230661:G: 1297/28236) Row 122029014 (NC_000020.11:19230661::GG 366/28236)...	-	Oct 13, 2022 (156)
92	UK 10K study - Twins Submission ignored due to conflicting rows: Row 43058577 (NC_000020.10:19211305::GG 450/3708) Row 43058578 (NC_000020.10:19211305:G: 966/3708)	-	Oct 12, 2018 (152)
93	UK 10K study - Twins Submission ignored due to conflicting rows: Row 43058577 (NC_000020.10:19211305::GG 450/3708) Row 43058578 (NC_000020.10:19211305:G: 966/3708)	-	Oct 12, 2018 (152)
94	ALFA	NC_000020.11 - 19230662	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs201979590	May 11, 2012 (137)
rs368297147	May 13, 2013 (138)
rs371005737	May 15, 2013 (138)
rs33951550	May 23, 2006 (127)
rs372694923	May 13, 2013 (138)
rs33955067	May 15, 2013 (138)
rs113905485	Oct 04, 2011 (135)
rs143024340	May 11, 2012 (137)
rs146674355	Sep 17, 2011 (135)
rs149630180	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3706688183	NC_000020.11:19230661:GGG:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGG	(self)
ss4336150045	NC_000020.11:19230661:GG:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGG	(self)
7488420773	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGG	(self)
ss289405446, ss328291540, ss553051382	NC_000020.9:19159305:G:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	(self)
ss82188530, ss295042522	NC_000020.9:19159312:G:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	(self)
ss1709319514, ss1709320021, ss1809451573, ss3644444494, ss3743307927, ss3841438027, ss5229125330, ss5845535593	NC_000020.10:19211305:G:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	(self)
ss554978853	NC_000020.10:19211310:G:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	(self)
ss554978855	NC_000020.10:19211312:G:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	(self)
ss3064849240, ss3650986723, ss3846946107, ss5308307004, ss5500688476, ss5788191909	NC_000020.11:19230661:G:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	(self)
7488420773	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	(self)
ss3706688182	NC_000020.11:19230663:G:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	(self)
ss95737642	NT_011387.8:19151312:G:	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGG	(self)
ss327935408, ss328055132, ss552653950, ss553675412	NC_000020.9:19159305::G	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	(self)
ss295042521	NC_000020.9:19159312::G	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	(self)
ss289405447	NC_000020.9:19159313::G	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	(self)
77768421, ss664465754, ss666742185, ss1378423632, ss1809451572, ss2629417117, ss3743307926, ss3788617560, ss3793515338, ss3798402511, ss3835623161, ss5229125328, ss5845535592	NC_000020.10:19211305::G	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	(self)
ss565934423	NC_000020.10:19211313::G	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	(self)
ss3821675081, ss4336150040, ss5308307002, ss5500688475, ss5788191908	NC_000020.11:19230661::G	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	(self)
7488420773	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	(self)
ss3706688181	NC_000020.11:19230664::G	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	(self)
ss80505967, ss115489872, ss288534421	NT_011387.8:19151313::G	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGG	(self)
77768421, ss1378423636, ss3743307928, ss5229125329, ss5845535591	NC_000020.10:19211305::GG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGG	(self)
ss1710808659, ss1710808660	NC_000020.10:19211306::GG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGG	(self)
ss565934423	NC_000020.10:19211313::GG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGG	(self)
ss3821675082, ss4336150041, ss5308307003, ss5500688477, ss5788191910	NC_000020.11:19230661::GG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGG	(self)
7488420773	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGG	(self)
ss3706688180	NC_000020.11:19230664::GG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGG	(self)
ss193606585	NT_011387.9:19170661::GG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGG	(self)
ss5229125331	NC_000020.10:19211305::GGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGG	(self)
ss5308307005, ss5500688478, ss5788191911	NC_000020.11:19230661::GGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGG	(self)
7488420773	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGG	(self)
ss3706688179	NC_000020.11:19230664::GGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGG	(self)
ss4336150042	NC_000020.11:19230661::GGGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGGG	(self)
7488420773	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGGG	(self)
7488420773	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGGGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGGGG	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3356558384	NC_000020.11:19230661::GGGGG	NC_000020.11:19230661:GGGGGGGG:GGG… NC_000020.11:19230661:GGGGGGGG:GGGGGGGGGGGGG

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs5840835

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs5840835