Name: rs5837102
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs5837102

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr2:188738537-188738551 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₄ / delTTT / delTT / delT / …
del(T)₄ / delTTT / delTT / delT / dupT / dup(T)₁₁ / dup(T)₁₂ / ins(T)₅₀
Variation Type: Indel Insertion and Deletion
Frequency: (T)₁₅=0.0439 (220/5008, 1000G)
(T)₁₅=0.1347 (598/4438, ALFA)
(T)₁₅=0.0000 (0/3854, ALSPAC) (+ 1 more)
(T)₁₅=0.0000 (0/3708, TWINSUK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: DIRC1 : Intron Variant
LOC105373790 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	4438	TTTTTTTTTTTTTTT=0.1347	TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.8641, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.0005, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0007, TTTTTTTTTTTTTTTT=0.0000	0.03523	0.765131	0.199639	25
European	Sub	4426	TTTTTTTTTTTTTTT=0.1340	TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.8649, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.0005, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0007, TTTTTTTTTTTTTTTT=0.0000	0.03442	0.765851	0.199728	24
African	Sub	4	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
African Others	Sub	0	TTTTTTTTTTTTTTT=0	TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
African American	Sub	4	TTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Asian	Sub	0	TTTTTTTTTTTTTTT=0	TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
East Asian	Sub	0	TTTTTTTTTTTTTTT=0	TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
Other Asian	Sub	0	TTTTTTTTTTTTTTT=0	TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
Latin American 1	Sub	0	TTTTTTTTTTTTTTT=0	TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
Latin American 2	Sub	0	TTTTTTTTTTTTTTT=0	TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
South Asian	Sub	0	TTTTTTTTTTTTTTT=0	TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
Other	Sub	8	TTTTTTTTTTTTTTT=0.1	TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.9, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0	0.0	0.75	0.25	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	(T)₁₅=0.0439	delT=0.9561
1000Genomes	African	Sub	1322	(T)₁₅=0.0946	delT=0.9054
1000Genomes	East Asian	Sub	1008	(T)₁₅=0.0050	delT=0.9950
1000Genomes	Europe	Sub	1006	(T)₁₅=0.0199	delT=0.9801
1000Genomes	South Asian	Sub	978	(T)₁₅=0.046	delT=0.954
1000Genomes	American	Sub	694	(T)₁₅=0.036	delT=0.964
Allele Frequency Aggregator	Total	Global	4438	(T)₁₅=0.1347	delTTT=0.0000, delTT=0.0000, delT=0.8641, dupT=0.0000, dup(T)₁₁=0.0005, dup(T)₁₂=0.0007
Allele Frequency Aggregator	European	Sub	4426	(T)₁₅=0.1340	delTTT=0.0000, delTT=0.0000, delT=0.8649, dupT=0.0000, dup(T)₁₁=0.0005, dup(T)₁₂=0.0007
Allele Frequency Aggregator	Other	Sub	8	(T)₁₅=0.1	delTTT=0.0, delTT=0.0, delT=0.9, dupT=0.0, dup(T)₁₁=0.0, dup(T)₁₂=0.0
Allele Frequency Aggregator	African	Sub	4	(T)₁₅=1.0	delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dup(T)₁₁=0.0, dup(T)₁₂=0.0
Allele Frequency Aggregator	Latin American 1	Sub	0	(T)₁₅=0	delTTT=0, delTT=0, delT=0, dupT=0, dup(T)₁₁=0, dup(T)₁₂=0
Allele Frequency Aggregator	Latin American 2	Sub	0	(T)₁₅=0	delTTT=0, delTT=0, delT=0, dupT=0, dup(T)₁₁=0, dup(T)₁₂=0
Allele Frequency Aggregator	South Asian	Sub	0	(T)₁₅=0	delTTT=0, delTT=0, delT=0, dupT=0, dup(T)₁₁=0, dup(T)₁₂=0
Allele Frequency Aggregator	Asian	Sub	0	(T)₁₅=0	delTTT=0, delTT=0, delT=0, dupT=0, dup(T)₁₁=0, dup(T)₁₂=0
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(T)₁₅=0.0000	delT=1.0000
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(T)₁₅=0.0000	delT=1.0000

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.188738548_188738551del
GRCh38.p14 chr 2	NC_000002.12:g.188738549_188738551del
GRCh38.p14 chr 2	NC_000002.12:g.188738550_188738551del
GRCh38.p14 chr 2	NC_000002.12:g.188738551del
GRCh38.p14 chr 2	NC_000002.12:g.188738551dup
GRCh38.p14 chr 2	NC_000002.12:g.188738541_188738551dup
GRCh38.p14 chr 2	NC_000002.12:g.188738540_188738551dup
GRCh38.p14 chr 2	NC_000002.12:g.188738551_188738552insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
GRCh37.p13 chr 2	NC_000002.11:g.189603275_189603278del
GRCh37.p13 chr 2	NC_000002.11:g.189603276_189603278del
GRCh37.p13 chr 2	NC_000002.11:g.189603277_189603278del
GRCh37.p13 chr 2	NC_000002.11:g.189603278del
GRCh37.p13 chr 2	NC_000002.11:g.189603278dup
GRCh37.p13 chr 2	NC_000002.11:g.189603268_189603278dup
GRCh37.p13 chr 2	NC_000002.11:g.189603267_189603278dup
GRCh37.p13 chr 2	NC_000002.11:g.189603278_189603279insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
DIRC1 RefSeqGene	NG_027691.1:g.56565_56568del
DIRC1 RefSeqGene	NG_027691.1:g.56566_56568del
DIRC1 RefSeqGene	NG_027691.1:g.56567_56568del
DIRC1 RefSeqGene	NG_027691.1:g.56568del
DIRC1 RefSeqGene	NG_027691.1:g.56568dup
DIRC1 RefSeqGene	NG_027691.1:g.56558_56568dup
DIRC1 RefSeqGene	NG_027691.1:g.56557_56568dup
DIRC1 RefSeqGene	NG_027691.1:g.56568_56569insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gene: DIRC1, disrupted in renal carcinoma 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
DIRC1 transcript	NR_161166.1:n.	N/A	Intron Variant

Gene: LOC105373790, uncharacterized LOC105373790 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC105373790 transcript variant X1	XR_923685.3:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₅=	del(T)₄	delTTT	delTT	delT	dupT	dup(T)₁₁	dup(T)₁₂	ins(T)₅₀
GRCh38.p14 chr 2	NC_000002.12:g.188738537_188738551=	NC_000002.12:g.188738548_188738551del	NC_000002.12:g.188738549_188738551del	NC_000002.12:g.188738550_188738551del	NC_000002.12:g.188738551del	NC_000002.12:g.188738551dup	NC_000002.12:g.188738541_188738551dup	NC_000002.12:g.188738540_188738551dup	NC_000002.12:g.188738551_188738552insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
GRCh37.p13 chr 2	NC_000002.11:g.189603264_189603278=	NC_000002.11:g.189603275_189603278del	NC_000002.11:g.189603276_189603278del	NC_000002.11:g.189603277_189603278del	NC_000002.11:g.189603278del	NC_000002.11:g.189603278dup	NC_000002.11:g.189603268_189603278dup	NC_000002.11:g.189603267_189603278dup	NC_000002.11:g.189603278_189603279insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
DIRC1 RefSeqGene	NG_027691.1:g.56554_56568=	NG_027691.1:g.56565_56568del	NG_027691.1:g.56566_56568del	NG_027691.1:g.56567_56568del	NG_027691.1:g.56568del	NG_027691.1:g.56568dup	NG_027691.1:g.56558_56568dup	NG_027691.1:g.56557_56568dup	NG_027691.1:g.56568_56569insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
DIRC1 transcript	NM_052952.2:c.-29-3588=	NM_052952.2:c.-29-3591_-29-3588del	NM_052952.2:c.-29-3590_-29-3588del	NM_052952.2:c.-29-3589_-29-3588del	NM_052952.2:c.-29-3588del	NM_052952.2:c.-29-3588dup	NM_052952.2:c.-29-3598_-29-3588dup	NM_052952.2:c.-29-3599_-29-3588dup	NM_052952.2:c.-29-3588_-29-3587insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

46 SubSNP, 15 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss82951391	Sep 08, 2015 (146)
2	HUMANGENOME_JCVI	ss95296568	Feb 06, 2009 (137)
3	BCMHGSC_JDW	ss103640247	Mar 15, 2016 (147)
4	BUSHMAN	ss193580799	Jul 04, 2010 (132)
5	GMI	ss288268024	May 04, 2012 (137)
6	PJP	ss295019039	May 09, 2011 (134)
7	PJP	ss295019040	May 09, 2011 (137)
8	SSMP	ss663268482	Apr 01, 2015 (144)
9	BILGI_BIOE	ss666180251	Apr 25, 2013 (138)
10	SSIP	ss947070921	Aug 21, 2014 (142)
11	1000GENOMES	ss1369334492	Aug 21, 2014 (142)
12	DDI	ss1536322297	Apr 01, 2015 (144)
13	EVA_UK10K_TWINSUK	ss1703329512	Apr 01, 2015 (144)
14	EVA_UK10K_ALSPAC	ss1703329571	Apr 01, 2015 (144)
15	HAMMER_LAB	ss1798082719	Sep 08, 2015 (146)
16	SYSTEMSBIOZJU	ss2625027728	Nov 08, 2017 (151)
17	SWEGEN	ss2991056819	Nov 08, 2017 (151)
18	MCHAISSO	ss3063971387	Nov 08, 2017 (151)
19	MCHAISSO	ss3064825707	Nov 08, 2017 (151)
20	MCHAISSO	ss3065784221	Nov 08, 2017 (151)
21	BIOINF_KMB_FNS_UNIBA	ss3645602765	Oct 11, 2018 (152)
22	URBANLAB	ss3647233526	Oct 11, 2018 (152)
23	ACPOP	ss3729212400	Jul 13, 2019 (153)
24	ACPOP	ss3729212401	Jul 13, 2019 (153)
25	PACBIO	ss3784099894	Jul 13, 2019 (153)
26	PACBIO	ss3784099895	Jul 13, 2019 (153)
27	PACBIO	ss3789646563	Jul 13, 2019 (153)
28	PACBIO	ss3794519701	Jul 13, 2019 (153)
29	KHV_HUMAN_GENOMES	ss3802221484	Jul 13, 2019 (153)
30	EVA	ss3827413804	Apr 25, 2020 (154)
31	EVA	ss3842546775	Apr 25, 2020 (154)
32	GNOMAD	ss4057703167	Apr 26, 2021 (155)
33	GNOMAD	ss4057703168	Apr 26, 2021 (155)
34	GNOMAD	ss4057703169	Apr 26, 2021 (155)
35	GNOMAD	ss4057703170	Apr 26, 2021 (155)
36	GNOMAD	ss4057703171	Apr 26, 2021 (155)
37	TOMMO_GENOMICS	ss5155645678	Apr 26, 2021 (155)
38	TOMMO_GENOMICS	ss5155645679	Apr 26, 2021 (155)
39	1000G_HIGH_COVERAGE	ss5251375922	Oct 17, 2022 (156)
40	1000G_HIGH_COVERAGE	ss5251375923	Oct 17, 2022 (156)
41	HUGCELL_USP	ss5451056966	Oct 17, 2022 (156)
42	TOMMO_GENOMICS	ss5686279210	Oct 17, 2022 (156)
43	TOMMO_GENOMICS	ss5686279211	Oct 17, 2022 (156)
44	YY_MCH	ss5803067811	Oct 17, 2022 (156)
45	EVA	ss5821339648	Oct 17, 2022 (156)
46	EVA	ss5933951594	Oct 17, 2022 (156)
47	1000Genomes	NC_000002.11 - 189603264	Oct 11, 2018 (152)
48	The Avon Longitudinal Study of Parents and Children	NC_000002.11 - 189603264	Oct 11, 2018 (152)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85325878 (NC_000002.12:188738536::T 1/126340) Row 85325879 (NC_000002.12:188738536:T: 122614/126422) Row 85325880 (NC_000002.12:188738536:TT: 384/126184)...	-	Apr 26, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85325878 (NC_000002.12:188738536::T 1/126340) Row 85325879 (NC_000002.12:188738536:T: 122614/126422) Row 85325880 (NC_000002.12:188738536:TT: 384/126184)...	-	Apr 26, 2021 (155)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85325878 (NC_000002.12:188738536::T 1/126340) Row 85325879 (NC_000002.12:188738536:T: 122614/126422) Row 85325880 (NC_000002.12:188738536:TT: 384/126184)...	-	Apr 26, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85325878 (NC_000002.12:188738536::T 1/126340) Row 85325879 (NC_000002.12:188738536:T: 122614/126422) Row 85325880 (NC_000002.12:188738536:TT: 384/126184)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85325878 (NC_000002.12:188738536::T 1/126340) Row 85325879 (NC_000002.12:188738536:T: 122614/126422) Row 85325880 (NC_000002.12:188738536:TT: 384/126184)...	-	Apr 26, 2021 (155)
54	Northern Sweden Submission ignored due to conflicting rows: Row 2497265 (NC_000002.11:189603263:T: 458/598) Row 2497266 (NC_000002.11:189603263::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1/598)	-	Jul 13, 2019 (153)
55	Northern Sweden Submission ignored due to conflicting rows: Row 2497265 (NC_000002.11:189603263:T: 458/598) Row 2497266 (NC_000002.11:189603263::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1/598)	-	Jul 13, 2019 (153)
56	8.3KJPN Submission ignored due to conflicting rows: Row 13614985 (NC_000002.11:189603263:T: 16699/16760) Row 13614986 (NC_000002.11:189603263:TT: 41/16760)	-	Apr 26, 2021 (155)
57	8.3KJPN Submission ignored due to conflicting rows: Row 13614985 (NC_000002.11:189603263:T: 16699/16760) Row 13614986 (NC_000002.11:189603263:TT: 41/16760)	-	Apr 26, 2021 (155)
58	14KJPN Submission ignored due to conflicting rows: Row 20116314 (NC_000002.12:188738536:T: 28149/28256) Row 20116315 (NC_000002.12:188738536:TT: 71/28256)	-	Oct 17, 2022 (156)
59	14KJPN Submission ignored due to conflicting rows: Row 20116314 (NC_000002.12:188738536:T: 28149/28256) Row 20116315 (NC_000002.12:188738536:TT: 71/28256)	-	Oct 17, 2022 (156)
60	UK 10K study - Twins	NC_000002.11 - 189603264	Oct 11, 2018 (152)
61	ALFA	NC_000002.12 - 188738537	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs78219418	Oct 26, 2010 (133)
rs11354519	May 11, 2012 (137)
rs34693154	May 23, 2006 (127)
rs61562743	May 27, 2008 (130)
rs72417326	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4057703171	NC_000002.12:188738536:TTTT:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss4057703170	NC_000002.12:188738536:TTT:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
6580479354	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss103640247	NT_005403.17:39812692:TTT:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3784099894, ss5155645679	NC_000002.11:189603263:TT:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4057703169, ss5251375922, ss5686279211	NC_000002.12:188738536:TT:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
6580479354	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss82951391	NC_000002.9:189428783:T:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss288268024, ss295019039	NC_000002.10:189311508:T:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss295019040	NC_000002.10:189311522:T:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
11971377, 6614640, 6614640, ss663268482, ss666180251, ss1369334492, ss1536322297, ss1703329512, ss1703329571, ss1798082719, ss2625027728, ss2991056819, ss3729212400, ss3784099895, ss3789646563, ss3794519701, ss3827413804, ss5155645678, ss5821339648	NC_000002.11:189603263:T:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss947070921	NC_000002.11:189603264:T:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3063971387, ss3064825707, ss3065784221, ss3645602765, ss3647233526, ss3802221484, ss3842546775, ss4057703168, ss5251375923, ss5451056966, ss5686279210, ss5803067811, ss5933951594	NC_000002.12:188738536:T:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
6580479354	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss95296568	NT_005403.17:39812695:T:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss193580799	NT_005403.18:94242521:T:	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4057703167	NC_000002.12:188738536::T	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
6580479354	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
6580479354	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT	(self)
6580479354	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss3729212401	NC_000002.11:189603263::TTTTTTTTTT… NC_000002.11:189603263::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	NC_000002.12:188738536:TTTTTTTTTTT… NC_000002.12:188738536:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs5837102

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs5837102