Name: rs58358556
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs58358556

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:17133370-17133383 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₄ / delAAA / delAA / delA / …
del(A)₄ / delAAA / delAA / delA / dupA / dupAA / dupAAA
Variation Type: Indel Insertion and Deletion
Frequency: delA=0.1400 (701/5008, 1000G)
(A)₁₄=0.2323 (1100/4736, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: BASP1-AS1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	4736	AAAAAAAAAAAAAA=0.2323	AAAAAAAAAA=0.0000, AAAAAAAAAAA=0.0002, AAAAAAAAAAAA=0.7382, AAAAAAAAAAAAA=0.0291, AAAAAAAAAAAAAAA=0.0002, AAAAAAAAAAAAAAAA=0.0000	0.112204	0.628967	0.258829	32
European	Sub	4614	AAAAAAAAAAAAAA=0.2130	AAAAAAAAAA=0.0000, AAAAAAAAAAA=0.0002, AAAAAAAAAAAA=0.7566, AAAAAAAAAAAAA=0.0299, AAAAAAAAAAAAAAA=0.0002, AAAAAAAAAAAAAAAA=0.0000	0.089154	0.64614	0.264706	32
African	Sub	86	AAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
African Others	Sub	6	AAAAAAAAAAAAAA=1.0	AAAAAAAAAA=0.0, AAAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
African American	Sub	80	AAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Asian	Sub	12	AAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	10	AAAAAAAAAAAAAA=1.0	AAAAAAAAAA=0.0, AAAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Other Asian	Sub	2	AAAAAAAAAAAAAA=1.0	AAAAAAAAAA=0.0, AAAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	0	AAAAAAAAAAAAAA=0	AAAAAAAAAA=0, AAAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAA=0	0	0	0	N/A
Latin American 2	Sub	2	AAAAAAAAAAAAAA=1.0	AAAAAAAAAA=0.0, AAAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
South Asian	Sub	4	AAAAAAAAAAAAAA=1.0	AAAAAAAAAA=0.0, AAAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Other	Sub	18	AAAAAAAAAAAAAA=0.72	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.28, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	0.555556	0.111111	0.333333	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	(A)₁₄=0.8600	delA=0.1400
1000Genomes	African	Sub	1322	(A)₁₄=0.7723	delA=0.2277
1000Genomes	East Asian	Sub	1008	(A)₁₄=0.9177	delA=0.0823
1000Genomes	Europe	Sub	1006	(A)₁₄=0.8817	delA=0.1183
1000Genomes	South Asian	Sub	978	(A)₁₄=0.875	delA=0.125
1000Genomes	American	Sub	694	(A)₁₄=0.890	delA=0.110
Allele Frequency Aggregator	Total	Global	4736	(A)₁₄=0.2323	del(A)₄=0.0000, delAAA=0.0002, delAA=0.7382, delA=0.0291, dupA=0.0002, dupAA=0.0000
Allele Frequency Aggregator	European	Sub	4614	(A)₁₄=0.2130	del(A)₄=0.0000, delAAA=0.0002, delAA=0.7566, delA=0.0299, dupA=0.0002, dupAA=0.0000
Allele Frequency Aggregator	African	Sub	86	(A)₁₄=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Other	Sub	18	(A)₁₄=0.72	del(A)₄=0.00, delAAA=0.00, delAA=0.28, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Asian	Sub	12	(A)₁₄=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	South Asian	Sub	4	(A)₁₄=1.0	del(A)₄=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0
Allele Frequency Aggregator	Latin American 2	Sub	2	(A)₁₄=1.0	del(A)₄=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0
Allele Frequency Aggregator	Latin American 1	Sub	0	(A)₁₄=0	del(A)₄=0, delAAA=0, delAA=0, delA=0, dupA=0, dupAA=0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.17133380_17133383del
GRCh38.p14 chr 5	NC_000005.10:g.17133381_17133383del
GRCh38.p14 chr 5	NC_000005.10:g.17133382_17133383del
GRCh38.p14 chr 5	NC_000005.10:g.17133383del
GRCh38.p14 chr 5	NC_000005.10:g.17133383dup
GRCh38.p14 chr 5	NC_000005.10:g.17133382_17133383dup
GRCh38.p14 chr 5	NC_000005.10:g.17133381_17133383dup
GRCh37.p13 chr 5	NC_000005.9:g.17133489_17133492del
GRCh37.p13 chr 5	NC_000005.9:g.17133490_17133492del
GRCh37.p13 chr 5	NC_000005.9:g.17133491_17133492del
GRCh37.p13 chr 5	NC_000005.9:g.17133492del
GRCh37.p13 chr 5	NC_000005.9:g.17133492dup
GRCh37.p13 chr 5	NC_000005.9:g.17133491_17133492dup
GRCh37.p13 chr 5	NC_000005.9:g.17133490_17133492dup

Gene: BASP1-AS1, BASP1 antisense RNA 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
BASP1-AS1 transcript	NR_027253.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₄=	del(A)₄	delAAA	delAA	delA	dupA	dupAA	dupAAA
GRCh38.p14 chr 5	NC_000005.10:g.17133370_17133383=	NC_000005.10:g.17133380_17133383del	NC_000005.10:g.17133381_17133383del	NC_000005.10:g.17133382_17133383del	NC_000005.10:g.17133383del	NC_000005.10:g.17133383dup	NC_000005.10:g.17133382_17133383dup	NC_000005.10:g.17133381_17133383dup
GRCh37.p13 chr 5	NC_000005.9:g.17133479_17133492=	NC_000005.9:g.17133489_17133492del	NC_000005.9:g.17133490_17133492del	NC_000005.9:g.17133491_17133492del	NC_000005.9:g.17133492del	NC_000005.9:g.17133492dup	NC_000005.9:g.17133491_17133492dup	NC_000005.9:g.17133490_17133492dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

66 SubSNP, 26 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42440740	Mar 15, 2016 (147)
2	HGSV	ss80209697	Sep 08, 2015 (146)
3	HGSV	ss80259813	Sep 08, 2015 (146)
4	HGSV	ss81920764	Sep 08, 2015 (146)
5	HGSV	ss82462559	Sep 08, 2015 (146)
6	HGSV	ss82495587	Sep 08, 2015 (146)
7	HUMANGENOME_JCVI	ss95387411	Mar 15, 2016 (147)
8	BCMHGSC_JDW	ss103706340	Mar 15, 2016 (147)
9	BUSHMAN	ss193789127	Mar 15, 2016 (147)
10	GMI	ss287768212	Mar 15, 2016 (147)
11	GMI	ss288615730	May 04, 2012 (137)
12	PJP	ss295214602	Aug 21, 2014 (142)
13	PJP	ss295214603	May 09, 2011 (135)
14	SSMP	ss663582972	Apr 01, 2015 (144)
15	BILGI_BIOE	ss666300906	Apr 25, 2013 (138)
16	1000GENOMES	ss1373492852	Aug 21, 2014 (142)
17	DDI	ss1536453359	Apr 01, 2015 (144)
18	EVA_UK10K_ALSPAC	ss1704580366	Apr 01, 2015 (144)
19	EVA_UK10K_TWINSUK	ss1704580541	Apr 01, 2015 (144)
20	EVA_UK10K_TWINSUK	ss1710197211	Apr 01, 2015 (144)
21	EVA_UK10K_ALSPAC	ss1710197313	Apr 01, 2015 (144)
22	HAMMER_LAB	ss1803138930	Sep 08, 2015 (146)
23	SWEGEN	ss2996511355	Nov 08, 2017 (151)
24	MCHAISSO	ss3065018130	Nov 08, 2017 (151)
25	MCHAISSO	ss3066005480	Nov 08, 2017 (151)
26	BIOINF_KMB_FNS_UNIBA	ss3645862803	Oct 12, 2018 (152)
27	URBANLAB	ss3647997013	Oct 12, 2018 (152)
28	EVA_DECODE	ss3714197480	Jul 13, 2019 (153)
29	EVA_DECODE	ss3714197481	Jul 13, 2019 (153)
30	EVA_DECODE	ss3714197482	Jul 13, 2019 (153)
31	ACPOP	ss3732131105	Jul 13, 2019 (153)
32	ACPOP	ss3732131106	Jul 13, 2019 (153)
33	PACBIO	ss3785037825	Jul 13, 2019 (153)
34	PACBIO	ss3790454342	Jul 13, 2019 (153)
35	PACBIO	ss3795330964	Jul 13, 2019 (153)
36	KHV_HUMAN_GENOMES	ss3806292320	Jul 13, 2019 (153)
37	EVA	ss3829118634	Apr 26, 2020 (154)
38	EVA	ss3838022992	Apr 26, 2020 (154)
39	EVA	ss3843463075	Apr 26, 2020 (154)
40	KOGIC	ss3956179419	Apr 26, 2020 (154)
41	KOGIC	ss3956179420	Apr 26, 2020 (154)
42	KOGIC	ss3956179421	Apr 26, 2020 (154)
43	KOGIC	ss3956179422	Apr 26, 2020 (154)
44	GNOMAD	ss4100075646	Apr 26, 2021 (155)
45	GNOMAD	ss4100075647	Apr 26, 2021 (155)
46	GNOMAD	ss4100075648	Apr 26, 2021 (155)
47	GNOMAD	ss4100075649	Apr 26, 2021 (155)
48	GNOMAD	ss4100075650	Apr 26, 2021 (155)
49	TOMMO_GENOMICS	ss5170587213	Apr 26, 2021 (155)
50	TOMMO_GENOMICS	ss5170587214	Apr 26, 2021 (155)
51	TOMMO_GENOMICS	ss5170587215	Apr 26, 2021 (155)
52	TOMMO_GENOMICS	ss5170587216	Apr 26, 2021 (155)
53	1000G_HIGH_COVERAGE	ss5263041433	Oct 13, 2022 (156)
54	1000G_HIGH_COVERAGE	ss5263041434	Oct 13, 2022 (156)
55	1000G_HIGH_COVERAGE	ss5263041435	Oct 13, 2022 (156)
56	1000G_HIGH_COVERAGE	ss5263041436	Oct 13, 2022 (156)
57	HUGCELL_USP	ss5461373142	Oct 13, 2022 (156)
58	HUGCELL_USP	ss5461373143	Oct 13, 2022 (156)
59	TOMMO_GENOMICS	ss5706318876	Oct 13, 2022 (156)
60	TOMMO_GENOMICS	ss5706318877	Oct 13, 2022 (156)
61	TOMMO_GENOMICS	ss5706318878	Oct 13, 2022 (156)
62	TOMMO_GENOMICS	ss5706318879	Oct 13, 2022 (156)
63	EVA	ss5834584539	Oct 13, 2022 (156)
64	EVA	ss5834584540	Oct 13, 2022 (156)
65	EVA	ss5854704824	Oct 13, 2022 (156)
66	EVA	ss5893185564	Oct 13, 2022 (156)
67	1000Genomes	NC_000005.9 - 17133479	Oct 12, 2018 (152)
68	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 14279803 (NC_000005.9:17133479:A: 3385/3854) Row 14279804 (NC_000005.9:17133478:AAA: 122/3854)	-	Oct 12, 2018 (152)
69	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 14279803 (NC_000005.9:17133479:A: 3385/3854) Row 14279804 (NC_000005.9:17133478:AAA: 122/3854)	-	Oct 12, 2018 (152)
70	gnomAD - Genomes Submission ignored due to conflicting rows: Row 181253450 (NC_000005.10:17133369::A 37/136586) Row 181253451 (NC_000005.10:17133369::AAA 1/136584) Row 181253452 (NC_000005.10:17133369:A: 10523/136450)...	-	Apr 26, 2021 (155)
71	gnomAD - Genomes Submission ignored due to conflicting rows: Row 181253450 (NC_000005.10:17133369::A 37/136586) Row 181253451 (NC_000005.10:17133369::AAA 1/136584) Row 181253452 (NC_000005.10:17133369:A: 10523/136450)...	-	Apr 26, 2021 (155)
72	gnomAD - Genomes Submission ignored due to conflicting rows: Row 181253450 (NC_000005.10:17133369::A 37/136586) Row 181253451 (NC_000005.10:17133369::AAA 1/136584) Row 181253452 (NC_000005.10:17133369:A: 10523/136450)...	-	Apr 26, 2021 (155)
73	gnomAD - Genomes Submission ignored due to conflicting rows: Row 181253450 (NC_000005.10:17133369::A 37/136586) Row 181253451 (NC_000005.10:17133369::AAA 1/136584) Row 181253452 (NC_000005.10:17133369:A: 10523/136450)...	-	Apr 26, 2021 (155)
74	gnomAD - Genomes Submission ignored due to conflicting rows: Row 181253450 (NC_000005.10:17133369::A 37/136586) Row 181253451 (NC_000005.10:17133369::AAA 1/136584) Row 181253452 (NC_000005.10:17133369:A: 10523/136450)...	-	Apr 26, 2021 (155)
75	gnomAD - Genomes Submission ignored due to conflicting rows: Row 181253450 (NC_000005.10:17133369::A 37/136586) Row 181253451 (NC_000005.10:17133369::AAA 1/136584) Row 181253452 (NC_000005.10:17133369:A: 10523/136450)...	-	Apr 26, 2021 (155)
76	Korean Genome Project Submission ignored due to conflicting rows: Row 12557420 (NC_000005.10:17133370:AA: 1135/1832) Row 12557421 (NC_000005.10:17133369:AAA: 25/1832) Row 12557422 (NC_000005.10:17133371:A: 26/1832)...	-	Apr 26, 2020 (154)
77	Korean Genome Project Submission ignored due to conflicting rows: Row 12557420 (NC_000005.10:17133370:AA: 1135/1832) Row 12557421 (NC_000005.10:17133369:AAA: 25/1832) Row 12557422 (NC_000005.10:17133371:A: 26/1832)...	-	Apr 26, 2020 (154)
78	Korean Genome Project Submission ignored due to conflicting rows: Row 12557420 (NC_000005.10:17133370:AA: 1135/1832) Row 12557421 (NC_000005.10:17133369:AAA: 25/1832) Row 12557422 (NC_000005.10:17133371:A: 26/1832)...	-	Apr 26, 2020 (154)
79	Korean Genome Project Submission ignored due to conflicting rows: Row 12557420 (NC_000005.10:17133370:AA: 1135/1832) Row 12557421 (NC_000005.10:17133369:AAA: 25/1832) Row 12557422 (NC_000005.10:17133371:A: 26/1832)...	-	Apr 26, 2020 (154)
80	Northern Sweden Submission ignored due to conflicting rows: Row 5415970 (NC_000005.9:17133478:AA: 464/586) Row 5415971 (NC_000005.9:17133478:A: 21/586)	-	Jul 13, 2019 (153)
81	Northern Sweden Submission ignored due to conflicting rows: Row 5415970 (NC_000005.9:17133478:AA: 464/586) Row 5415971 (NC_000005.9:17133478:A: 21/586)	-	Jul 13, 2019 (153)
82	8.3KJPN Submission ignored due to conflicting rows: Row 28556520 (NC_000005.9:17133478:AA: 11605/16760) Row 28556521 (NC_000005.9:17133478:AAA: 7/16760) Row 28556522 (NC_000005.9:17133478::A 28/16760)...	-	Apr 26, 2021 (155)
83	8.3KJPN Submission ignored due to conflicting rows: Row 28556520 (NC_000005.9:17133478:AA: 11605/16760) Row 28556521 (NC_000005.9:17133478:AAA: 7/16760) Row 28556522 (NC_000005.9:17133478::A 28/16760)...	-	Apr 26, 2021 (155)
84	8.3KJPN Submission ignored due to conflicting rows: Row 28556520 (NC_000005.9:17133478:AA: 11605/16760) Row 28556521 (NC_000005.9:17133478:AAA: 7/16760) Row 28556522 (NC_000005.9:17133478::A 28/16760)...	-	Apr 26, 2021 (155)
85	8.3KJPN Submission ignored due to conflicting rows: Row 28556520 (NC_000005.9:17133478:AA: 11605/16760) Row 28556521 (NC_000005.9:17133478:AAA: 7/16760) Row 28556522 (NC_000005.9:17133478::A 28/16760)...	-	Apr 26, 2021 (155)
86	14KJPN Submission ignored due to conflicting rows: Row 40155980 (NC_000005.10:17133369:AA: 19487/28258) Row 40155981 (NC_000005.10:17133369:AAA: 9/28258) Row 40155982 (NC_000005.10:17133369::A 40/28258)...	-	Oct 13, 2022 (156)
87	14KJPN Submission ignored due to conflicting rows: Row 40155980 (NC_000005.10:17133369:AA: 19487/28258) Row 40155981 (NC_000005.10:17133369:AAA: 9/28258) Row 40155982 (NC_000005.10:17133369::A 40/28258)...	-	Oct 13, 2022 (156)
88	14KJPN Submission ignored due to conflicting rows: Row 40155980 (NC_000005.10:17133369:AA: 19487/28258) Row 40155981 (NC_000005.10:17133369:AAA: 9/28258) Row 40155982 (NC_000005.10:17133369::A 40/28258)...	-	Oct 13, 2022 (156)
89	14KJPN Submission ignored due to conflicting rows: Row 40155980 (NC_000005.10:17133369:AA: 19487/28258) Row 40155981 (NC_000005.10:17133369:AAA: 9/28258) Row 40155982 (NC_000005.10:17133369::A 40/28258)...	-	Oct 13, 2022 (156)
90	UK 10K study - Twins Submission ignored due to conflicting rows: Row 14279803 (NC_000005.9:17133479:A: 3281/3708) Row 14279804 (NC_000005.9:17133478:AAA: 115/3708)	-	Oct 12, 2018 (152)
91	UK 10K study - Twins Submission ignored due to conflicting rows: Row 14279803 (NC_000005.9:17133479:A: 3281/3708) Row 14279804 (NC_000005.9:17133478:AAA: 115/3708)	-	Oct 12, 2018 (152)
92	ALFA	NC_000005.10 - 17133370	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs35849042	May 23, 2006 (127)
rs141942049	Sep 17, 2011 (135)
rs202024068	May 11, 2012 (137)
rs77855282	Oct 14, 2011 (136)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4100075650	NC_000005.10:17133369:AAAA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAA	(self)
3077298228	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAA	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAA	(self)
ss1704580366, ss1704580541, ss5170587214, ss5834584540	NC_000005.9:17133478:AAA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAA	(self)
ss3714197482, ss3956179420, ss4100075649, ss5263041435, ss5706318877	NC_000005.10:17133369:AAA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAA	(self)
3077298228	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAA	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAA	(self)
ss288615730, ss295214602	NC_000005.8:17186478:AA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss80209697, ss80259813, ss82462559, ss82495587, ss295214603	NC_000005.8:17186490:AA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss663582972, ss666300906, ss1536453359, ss1803138930, ss2996511355, ss3732131105, ss3785037825, ss3790454342, ss3795330964, ss3829118634, ss3838022992, ss5170587213, ss5834584539	NC_000005.9:17133478:AA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss1710197211, ss1710197313	NC_000005.9:17133479:AA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3065018130, ss3066005480, ss3645862803, ss3647997013, ss3843463075, ss4100075648, ss5263041433, ss5461373142, ss5706318876, ss5854704824, ss5893185564	NC_000005.10:17133369:AA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
3077298228	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3714197481, ss3956179419	NC_000005.10:17133370:AA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss42440740, ss193789127, ss287768212	NT_006576.16:17123478:AA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss103706340	NT_006576.16:17123490:AA:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss81920764	NC_000005.8:17186491:A:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
25654181, ss1373492852, ss3732131106, ss5170587216	NC_000005.9:17133478:A:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
	NC_000005.9:17133479:A:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3806292320, ss5263041434, ss5461373143, ss5706318879	NC_000005.10:17133369:A:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
3077298228	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3714197480, ss3956179421	NC_000005.10:17133371:A:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss95387411	NT_006576.16:17123491:A:	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss5170587215	NC_000005.9:17133478::A	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss4100075646, ss5263041436, ss5706318878	NC_000005.10:17133369::A	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
3077298228	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3956179422	NC_000005.10:17133372::A	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss95387411	NT_006576.16:17123491:A:AA	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
3077298228	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss4100075647	NC_000005.10:17133369::AAA	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3457405598	NC_000005.10:17133369::AA	NC_000005.10:17133369:AAAAAAAAAAAA… NC_000005.10:17133369:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs58358556

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs58358556