Name: rs57365669
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs57365669

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr11:122867355-122867370 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₆ / del(A)₅ / del(A)₄ / delA…
del(A)₆ / del(A)₅ / del(A)₄ / delAAA / delAA / delA / dupA / dup(A)₇
Variation Type: Indel Insertion and Deletion
Frequency: (A)₁₆=0.1814 (782/4310, ALFA)
(A)₁₆=0.081 (47/578, NorthernSweden)
del(A)₄=0.124 (19/153, 1000G) (+ 1 more)
(A)₁₆=0.00 (0/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: CRTAM : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	4310	AAAAAAAAAAAAAAAA=0.1814	AAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.0009, AAAAAAAAAAAAAA=0.8160, AAAAAAAAAAAAAAA=0.0016, AAAAAAAAAAAAAAAAA=0.0000	0.018657	0.654384	0.326959	11
European	Sub	4284	AAAAAAAAAAAAAAAA=0.1781	AAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.0009, AAAAAAAAAAAAAA=0.8193, AAAAAAAAAAAAAAA=0.0016, AAAAAAAAAAAAAAAAA=0.0000	0.014547	0.656969	0.328484	16
African	Sub	12	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
African Others	Sub	0	AAAAAAAAAAAAAAAA=0	AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0	0	0	0	N/A
African American	Sub	12	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Asian	Sub	0	AAAAAAAAAAAAAAAA=0	AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0	0	0	0	N/A
East Asian	Sub	0	AAAAAAAAAAAAAAAA=0	AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Other Asian	Sub	0	AAAAAAAAAAAAAAAA=0	AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Latin American 1	Sub	0	AAAAAAAAAAAAAAAA=0	AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Latin American 2	Sub	6	AAAAAAAAAAAAAAAA=1.0	AAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
South Asian	Sub	0	AAAAAAAAAAAAAAAA=0	AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Other	Sub	8	AAAAAAAAAAAAAAAA=0.1	AAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.9, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0	0.0	0.75	0.25	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	4310	(A)₁₆=0.1814	del(A)₆=0.0000, del(A)₄=0.0000, delAAA=0.0009, delAA=0.8160, delA=0.0016, dupA=0.0000
Allele Frequency Aggregator	European	Sub	4284	(A)₁₆=0.1781	del(A)₆=0.0000, del(A)₄=0.0000, delAAA=0.0009, delAA=0.8193, delA=0.0016, dupA=0.0000
Allele Frequency Aggregator	African	Sub	12	(A)₁₆=1.00	del(A)₆=0.00, del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00
Allele Frequency Aggregator	Other	Sub	8	(A)₁₆=0.1	del(A)₆=0.0, del(A)₄=0.0, delAAA=0.0, delAA=0.9, delA=0.0, dupA=0.0
Allele Frequency Aggregator	Latin American 2	Sub	6	(A)₁₆=1.0	del(A)₆=0.0, del(A)₄=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0
Allele Frequency Aggregator	Latin American 1	Sub	0	(A)₁₆=0	del(A)₆=0, del(A)₄=0, delAAA=0, delAA=0, delA=0, dupA=0
Allele Frequency Aggregator	South Asian	Sub	0	(A)₁₆=0	del(A)₆=0, del(A)₄=0, delAAA=0, delAA=0, delA=0, dupA=0
Allele Frequency Aggregator	Asian	Sub	0	(A)₁₆=0	del(A)₆=0, del(A)₄=0, delAAA=0, delAA=0, delA=0, dupA=0
Northern Sweden	ACPOP	Study-wide	578	(A)₁₆=0.081	delAA=0.919
1000Genomes	Global	Study-wide	153	(A)₁₆=0.876	del(A)₄=0.124
1000Genomes	American	Sub	40	(A)₁₆=1.00	del(A)₄=0.00
1000Genomes	African	Sub	36	(A)₁₆=0.61	del(A)₄=0.39
1000Genomes	Europe	Sub	30	(A)₁₆=1.00	del(A)₄=0.00
1000Genomes	South Asian	Sub	24	(A)₁₆=0.88	del(A)₄=0.12
1000Genomes	East Asian	Sub	23	(A)₁₆=0.91	del(A)₄=0.09
The Danish reference pan genome	Danish	Study-wide	40	(A)₁₆=0.00	delAA=1.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 11	NC_000011.10:g.122867365_122867370del
GRCh38.p14 chr 11	NC_000011.10:g.122867366_122867370del
GRCh38.p14 chr 11	NC_000011.10:g.122867367_122867370del
GRCh38.p14 chr 11	NC_000011.10:g.122867368_122867370del
GRCh38.p14 chr 11	NC_000011.10:g.122867369_122867370del
GRCh38.p14 chr 11	NC_000011.10:g.122867370del
GRCh38.p14 chr 11	NC_000011.10:g.122867370dup
GRCh38.p14 chr 11	NC_000011.10:g.122867364_122867370dup
GRCh37.p13 chr 11	NC_000011.9:g.122738073_122738078del
GRCh37.p13 chr 11	NC_000011.9:g.122738074_122738078del
GRCh37.p13 chr 11	NC_000011.9:g.122738075_122738078del
GRCh37.p13 chr 11	NC_000011.9:g.122738076_122738078del
GRCh37.p13 chr 11	NC_000011.9:g.122738077_122738078del
GRCh37.p13 chr 11	NC_000011.9:g.122738078del
GRCh37.p13 chr 11	NC_000011.9:g.122738078dup
GRCh37.p13 chr 11	NC_000011.9:g.122738072_122738078dup

Gene: CRTAM, cytotoxic and regulatory T cell molecule (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
CRTAM transcript variant 2	NM_001304782.2:c.221-44_2… NM_001304782.2:c.221-44_221-39del	N/A	Intron Variant
CRTAM transcript variant 1	NM_019604.4:c.818-44_818-… NM_019604.4:c.818-44_818-39del	N/A	Intron Variant
CRTAM transcript variant X1	XM_011542900.3:c.665-44_6… XM_011542900.3:c.665-44_665-39del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₆=	del(A)₆	del(A)₅	del(A)₄	delAAA	delAA	delA	dupA	dup(A)₇
GRCh38.p14 chr 11	NC_000011.10:g.122867355_122867370=	NC_000011.10:g.122867365_122867370del	NC_000011.10:g.122867366_122867370del	NC_000011.10:g.122867367_122867370del	NC_000011.10:g.122867368_122867370del	NC_000011.10:g.122867369_122867370del	NC_000011.10:g.122867370del	NC_000011.10:g.122867370dup	NC_000011.10:g.122867364_122867370dup
GRCh37.p13 chr 11	NC_000011.9:g.122738063_122738078=	NC_000011.9:g.122738073_122738078del	NC_000011.9:g.122738074_122738078del	NC_000011.9:g.122738075_122738078del	NC_000011.9:g.122738076_122738078del	NC_000011.9:g.122738077_122738078del	NC_000011.9:g.122738078del	NC_000011.9:g.122738078dup	NC_000011.9:g.122738072_122738078dup
CRTAM transcript variant 2	NM_001304782.2:c.221-54=	NM_001304782.2:c.221-44_221-39del	NM_001304782.2:c.221-43_221-39del	NM_001304782.2:c.221-42_221-39del	NM_001304782.2:c.221-41_221-39del	NM_001304782.2:c.221-40_221-39del	NM_001304782.2:c.221-39del	NM_001304782.2:c.221-39dup	NM_001304782.2:c.221-45_221-39dup
CRTAM transcript	NM_019604.2:c.818-54=	NM_019604.2:c.818-44_818-39del	NM_019604.2:c.818-43_818-39del	NM_019604.2:c.818-42_818-39del	NM_019604.2:c.818-41_818-39del	NM_019604.2:c.818-40_818-39del	NM_019604.2:c.818-39del	NM_019604.2:c.818-39dup	NM_019604.2:c.818-45_818-39dup
CRTAM transcript variant 1	NM_019604.4:c.818-54=	NM_019604.4:c.818-44_818-39del	NM_019604.4:c.818-43_818-39del	NM_019604.4:c.818-42_818-39del	NM_019604.4:c.818-41_818-39del	NM_019604.4:c.818-40_818-39del	NM_019604.4:c.818-39del	NM_019604.4:c.818-39dup	NM_019604.4:c.818-45_818-39dup
CRTAM transcript variant X1	XM_011542900.3:c.665-54=	XM_011542900.3:c.665-44_665-39del	XM_011542900.3:c.665-43_665-39del	XM_011542900.3:c.665-42_665-39del	XM_011542900.3:c.665-41_665-39del	XM_011542900.3:c.665-40_665-39del	XM_011542900.3:c.665-39del	XM_011542900.3:c.665-39dup	XM_011542900.3:c.665-45_665-39dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

76 SubSNP, 25 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss79776549	Sep 08, 2015 (146)
2	HGSV	ss80757492	Sep 08, 2015 (146)
3	HGSV	ss82195533	Sep 08, 2015 (146)
4	HUMANGENOME_JCVI	ss95582747	Feb 04, 2009 (130)
5	BUSHMAN	ss193255269	Mar 15, 2016 (147)
6	GMI	ss287883692	Mar 15, 2016 (147)
7	GMI	ss289101016	May 04, 2012 (137)
8	PJP	ss294727242	Aug 21, 2014 (142)
9	PJP	ss294727243	May 09, 2011 (135)
10	BILGI_BIOE	ss666552998	Apr 25, 2013 (138)
11	SSIP	ss947287355	Aug 21, 2014 (142)
12	1000GENOMES	ss1371619580	Aug 21, 2014 (142)
13	1000GENOMES	ss1371619581	Aug 21, 2014 (142)
14	1000GENOMES	ss1371619582	Aug 21, 2014 (142)
15	1000GENOMES	ss1371619583	Aug 21, 2014 (142)
16	DDI	ss1536709534	Apr 01, 2015 (144)
17	EVA_GENOME_DK	ss1574427950	Apr 01, 2015 (144)
18	EVA_UK10K_ALSPAC	ss1707289693	Apr 01, 2015 (144)
19	EVA_UK10K_TWINSUK	ss1707289699	Apr 01, 2015 (144)
20	EVA_UK10K_ALSPAC	ss1710536762	Apr 01, 2015 (144)
21	EVA_UK10K_TWINSUK	ss1710536765	Apr 01, 2015 (144)
22	HAMMER_LAB	ss1807034521	Sep 08, 2015 (146)
23	SWEGEN	ss3008912439	Nov 08, 2017 (151)
24	MCHAISSO	ss3063711358	Nov 08, 2017 (151)
25	MCHAISSO	ss3064538351	Nov 08, 2017 (151)
26	MCHAISSO	ss3065453523	Nov 08, 2017 (151)
27	BEROUKHIMLAB	ss3644331006	Oct 12, 2018 (152)
28	BIOINF_KMB_FNS_UNIBA	ss3645225304	Oct 12, 2018 (152)
29	URBANLAB	ss3649723308	Oct 12, 2018 (152)
30	EVA_DECODE	ss3692761703	Jul 13, 2019 (153)
31	EVA_DECODE	ss3692761704	Jul 13, 2019 (153)
32	EVA_DECODE	ss3692761705	Jul 13, 2019 (153)
33	EVA_DECODE	ss3692761706	Jul 13, 2019 (153)
34	EVA_DECODE	ss3692761707	Jul 13, 2019 (153)
35	ACPOP	ss3738611021	Jul 13, 2019 (153)
36	PACBIO	ss3787089768	Jul 13, 2019 (153)
37	PACBIO	ss3792210522	Jul 13, 2019 (153)
38	PACBIO	ss3797093046	Jul 13, 2019 (153)
39	KHV_HUMAN_GENOMES	ss3815241079	Jul 13, 2019 (153)
40	KHV_HUMAN_GENOMES	ss3815241080	Jul 13, 2019 (153)
41	KHV_HUMAN_GENOMES	ss3815241081	Jul 13, 2019 (153)
42	KHV_HUMAN_GENOMES	ss3815241082	Jul 13, 2019 (153)
43	EVA	ss3832879902	Apr 26, 2020 (154)
44	EVA	ss3845485250	Apr 26, 2020 (154)
45	KOGIC	ss3970921258	Apr 26, 2020 (154)
46	KOGIC	ss3970921259	Apr 26, 2020 (154)
47	KOGIC	ss3970921260	Apr 26, 2020 (154)
48	FSA-LAB	ss3984015843	Apr 26, 2021 (155)
49	EVA	ss3986549678	Apr 26, 2021 (155)
50	GNOMAD	ss4244014275	Apr 26, 2021 (155)
51	GNOMAD	ss4244014276	Apr 26, 2021 (155)
52	GNOMAD	ss4244014277	Apr 26, 2021 (155)
53	GNOMAD	ss4244014278	Apr 26, 2021 (155)
54	GNOMAD	ss4244014279	Apr 26, 2021 (155)
55	GNOMAD	ss4244014280	Apr 26, 2021 (155)
56	TOMMO_GENOMICS	ss5204262187	Apr 26, 2021 (155)
57	TOMMO_GENOMICS	ss5204262188	Apr 26, 2021 (155)
58	TOMMO_GENOMICS	ss5204262189	Apr 26, 2021 (155)
59	TOMMO_GENOMICS	ss5204262190	Apr 26, 2021 (155)
60	1000G_HIGH_COVERAGE	ss5289187598	Oct 16, 2022 (156)
61	1000G_HIGH_COVERAGE	ss5289187599	Oct 16, 2022 (156)
62	1000G_HIGH_COVERAGE	ss5289187600	Oct 16, 2022 (156)
63	1000G_HIGH_COVERAGE	ss5289187601	Oct 16, 2022 (156)
64	HUGCELL_USP	ss5484148624	Oct 16, 2022 (156)
65	HUGCELL_USP	ss5484148625	Oct 16, 2022 (156)
66	EVA	ss5623955605	Oct 16, 2022 (156)
67	EVA	ss5624026676	Oct 16, 2022 (156)
68	TOMMO_GENOMICS	ss5752820402	Oct 16, 2022 (156)
69	TOMMO_GENOMICS	ss5752820403	Oct 16, 2022 (156)
70	TOMMO_GENOMICS	ss5752820404	Oct 16, 2022 (156)
71	TOMMO_GENOMICS	ss5752820405	Oct 16, 2022 (156)
72	EVA	ss5800172676	Oct 16, 2022 (156)
73	EVA	ss5837342735	Oct 16, 2022 (156)
74	EVA	ss5837342736	Oct 16, 2022 (156)
75	TMC_SNPDB2	ss5847032561	Oct 16, 2022 (156)
76	EVA	ss5980708358	Oct 16, 2022 (156)
77	1000Genomes	NC_000011.9 - 122738063	Oct 12, 2018 (152)
78	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 31029716 (NC_000011.9:122738063:A: 3504/3854) Row 31029717 (NC_000011.9:122738062:AAA: 348/3854)	-	Oct 12, 2018 (152)
79	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 31029716 (NC_000011.9:122738063:A: 3504/3854) Row 31029717 (NC_000011.9:122738062:AAA: 348/3854)	-	Oct 12, 2018 (152)
80	The Danish reference pan genome	NC_000011.9 - 122738063	Apr 26, 2020 (154)
81	gnomAD - Genomes Submission ignored due to conflicting rows: Row 394330307 (NC_000011.10:122867354::A 35/133312) Row 394330308 (NC_000011.10:122867354:A: 3793/133010) Row 394330309 (NC_000011.10:122867354:AA: 118682/133316)...	-	Apr 26, 2021 (155)
82	gnomAD - Genomes Submission ignored due to conflicting rows: Row 394330307 (NC_000011.10:122867354::A 35/133312) Row 394330308 (NC_000011.10:122867354:A: 3793/133010) Row 394330309 (NC_000011.10:122867354:AA: 118682/133316)...	-	Apr 26, 2021 (155)
83	gnomAD - Genomes Submission ignored due to conflicting rows: Row 394330307 (NC_000011.10:122867354::A 35/133312) Row 394330308 (NC_000011.10:122867354:A: 3793/133010) Row 394330309 (NC_000011.10:122867354:AA: 118682/133316)...	-	Apr 26, 2021 (155)
84	gnomAD - Genomes Submission ignored due to conflicting rows: Row 394330307 (NC_000011.10:122867354::A 35/133312) Row 394330308 (NC_000011.10:122867354:A: 3793/133010) Row 394330309 (NC_000011.10:122867354:AA: 118682/133316)...	-	Apr 26, 2021 (155)
85	gnomAD - Genomes Submission ignored due to conflicting rows: Row 394330307 (NC_000011.10:122867354::A 35/133312) Row 394330308 (NC_000011.10:122867354:A: 3793/133010) Row 394330309 (NC_000011.10:122867354:AA: 118682/133316)...	-	Apr 26, 2021 (155)
86	gnomAD - Genomes Submission ignored due to conflicting rows: Row 394330307 (NC_000011.10:122867354::A 35/133312) Row 394330308 (NC_000011.10:122867354:A: 3793/133010) Row 394330309 (NC_000011.10:122867354:AA: 118682/133316)...	-	Apr 26, 2021 (155)
87	Korean Genome Project Submission ignored due to conflicting rows: Row 27299259 (NC_000011.10:122867354:AAA: 121/1830) Row 27299260 (NC_000011.10:122867355:AA: 1369/1830) Row 27299261 (NC_000011.10:122867356:A: 253/1830)	-	Apr 26, 2020 (154)
88	Korean Genome Project Submission ignored due to conflicting rows: Row 27299259 (NC_000011.10:122867354:AAA: 121/1830) Row 27299260 (NC_000011.10:122867355:AA: 1369/1830) Row 27299261 (NC_000011.10:122867356:A: 253/1830)	-	Apr 26, 2020 (154)
89	Korean Genome Project Submission ignored due to conflicting rows: Row 27299259 (NC_000011.10:122867354:AAA: 121/1830) Row 27299260 (NC_000011.10:122867355:AA: 1369/1830) Row 27299261 (NC_000011.10:122867356:A: 253/1830)	-	Apr 26, 2020 (154)
90	Northern Sweden	NC_000011.9 - 122738063	Jul 13, 2019 (153)
91	8.3KJPN Submission ignored due to conflicting rows: Row 62231494 (NC_000011.9:122738062:AA: 14041/16758) Row 62231495 (NC_000011.9:122738062:A: 1558/16758) Row 62231496 (NC_000011.9:122738062:AAA: 212/16758)...	-	Apr 26, 2021 (155)
92	8.3KJPN Submission ignored due to conflicting rows: Row 62231494 (NC_000011.9:122738062:AA: 14041/16758) Row 62231495 (NC_000011.9:122738062:A: 1558/16758) Row 62231496 (NC_000011.9:122738062:AAA: 212/16758)...	-	Apr 26, 2021 (155)
93	8.3KJPN Submission ignored due to conflicting rows: Row 62231494 (NC_000011.9:122738062:AA: 14041/16758) Row 62231495 (NC_000011.9:122738062:A: 1558/16758) Row 62231496 (NC_000011.9:122738062:AAA: 212/16758)...	-	Apr 26, 2021 (155)
94	8.3KJPN Submission ignored due to conflicting rows: Row 62231494 (NC_000011.9:122738062:AA: 14041/16758) Row 62231495 (NC_000011.9:122738062:A: 1558/16758) Row 62231496 (NC_000011.9:122738062:AAA: 212/16758)...	-	Apr 26, 2021 (155)
95	14KJPN Submission ignored due to conflicting rows: Row 86657506 (NC_000011.10:122867354:AA: 23827/28258) Row 86657507 (NC_000011.10:122867354:A: 2573/28258) Row 86657508 (NC_000011.10:122867354:AAA: 363/28258)...	-	Oct 16, 2022 (156)
96	14KJPN Submission ignored due to conflicting rows: Row 86657506 (NC_000011.10:122867354:AA: 23827/28258) Row 86657507 (NC_000011.10:122867354:A: 2573/28258) Row 86657508 (NC_000011.10:122867354:AAA: 363/28258)...	-	Oct 16, 2022 (156)
97	14KJPN Submission ignored due to conflicting rows: Row 86657506 (NC_000011.10:122867354:AA: 23827/28258) Row 86657507 (NC_000011.10:122867354:A: 2573/28258) Row 86657508 (NC_000011.10:122867354:AAA: 363/28258)...	-	Oct 16, 2022 (156)
98	14KJPN Submission ignored due to conflicting rows: Row 86657506 (NC_000011.10:122867354:AA: 23827/28258) Row 86657507 (NC_000011.10:122867354:A: 2573/28258) Row 86657508 (NC_000011.10:122867354:AAA: 363/28258)...	-	Oct 16, 2022 (156)
99	UK 10K study - Twins Submission ignored due to conflicting rows: Row 31029716 (NC_000011.9:122738063:A: 3419/3708) Row 31029717 (NC_000011.9:122738062:AAA: 289/3708)	-	Oct 12, 2018 (152)
100	UK 10K study - Twins Submission ignored due to conflicting rows: Row 31029716 (NC_000011.9:122738063:A: 3419/3708) Row 31029717 (NC_000011.9:122738062:AAA: 289/3708)	-	Oct 12, 2018 (152)
101	ALFA	NC_000011.10 - 122867355	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs71907772	May 11, 2012 (137)
rs147383207	Sep 17, 2011 (135)
rs202165482	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4244014280	NC_000011.10:122867354:AAAAAA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAA	(self)
3322299170	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAA	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAA	(self)
ss5847032561	NC_000011.10:122867354:AAAAA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAA
55890435, ss1371619580	NC_000011.9:122738062:AAAA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3692761707, ss4244014279, ss5289187601	NC_000011.10:122867354:AAAA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
3322299170	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss1707289693, ss1707289699, ss1807034521, ss3008912439, ss3984015843, ss5204262189, ss5837342736	NC_000011.9:122738062:AAA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss1371619581	NC_000011.9:122738063:AAA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3970921258, ss4244014278, ss5289187600, ss5484148624, ss5752820404	NC_000011.10:122867354:AAA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
3322299170	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3692761706, ss3815241080	NC_000011.10:122867355:AAA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss289101016, ss294727242	NC_000011.8:122243272:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss79776549, ss80757492, ss82195533, ss294727243	NC_000011.8:122243286:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
325856, 11895886, ss666552998, ss1536709534, ss1574427950, ss3644331006, ss3738611021, ss3787089768, ss3792210522, ss3797093046, ss3832879902, ss3986549678, ss5204262187, ss5623955605, ss5624026676, ss5800172676, ss5837342735, ss5980708358	NC_000011.9:122738062:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss947287355, ss1710536762, ss1710536765	NC_000011.9:122738063:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss1371619582	NC_000011.9:122738064:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3063711358, ss3064538351, ss3065453523, ss3645225304, ss3649723308, ss3815241079, ss3845485250, ss4244014277, ss5289187598, ss5484148625, ss5752820402	NC_000011.10:122867354:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
3322299170	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3970921259	NC_000011.10:122867355:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3692761705, ss3815241081	NC_000011.10:122867356:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss193255269, ss287883692	NT_033899.8:26300478:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss95582747	NT_033899.8:26300492:AA:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss5204262188	NC_000011.9:122738062:A:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
	NC_000011.9:122738063:A:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss1371619583	NC_000011.9:122738065:A:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss4244014276, ss5289187599, ss5752820403	NC_000011.10:122867354:A:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
3322299170	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3970921260	NC_000011.10:122867356:A:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3692761704, ss3815241082	NC_000011.10:122867357:A:	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss5204262190	NC_000011.9:122738062::A	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss4244014275, ss5752820405	NC_000011.10:122867354::A	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
3322299170	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3692761703	NC_000011.10:122867358::AAAAAAA	NC_000011.10:122867354:AAAAAAAAAAA… NC_000011.10:122867354:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs57365669

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs57365669