Name: rs534284469
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs534284469

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr16:14579983-14579997 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delAAA / delAA / delA / dupA / dup…
delAAA / delAA / delA / dupA / dupAA / dup(A)₁₁
Variation Type: Indel Insertion and Deletion
Frequency: delAA=0.0000 (0/6920, ALFA)
delA=0.0000 (0/6920, ALFA)
dupA=0.0000 (0/6920, ALFA) (+ 4 more)
dupAA=0.0000 (0/6920, ALFA)
delA=0.1747 (875/5008, 1000G)
delA=0.2595 (1000/3854, ALSPAC)
delA=0.2627 (974/3708, TWINSUK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: PARN : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	6920	AAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
European	Sub	3828	AAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
African	Sub	2102	AAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
African Others	Sub	98	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	N/A
African American	Sub	2004	AAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
Asian	Sub	106	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000	1.0	N/A
East Asian	Sub	82	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other Asian	Sub	24	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Latin American 1	Sub	80	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Latin American 2	Sub	452	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000	1.0	N/A
South Asian	Sub	54	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other	Sub	298	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	6920	(A)₁₅=1.0000	delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator	European	Sub	3828	(A)₁₅=1.0000	delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator	African	Sub	2102	(A)₁₅=1.0000	delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	452	(A)₁₅=1.000	delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	Other	Sub	298	(A)₁₅=1.000	delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	Asian	Sub	106	(A)₁₅=1.000	delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	Latin American 1	Sub	80	(A)₁₅=1.00	delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	South Asian	Sub	54	(A)₁₅=1.00	delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
1000Genomes	Global	Study-wide	5008	(A)₁₅=0.8253	delA=0.1747
1000Genomes	African	Sub	1322	(A)₁₅=0.8434	delA=0.1566
1000Genomes	East Asian	Sub	1008	(A)₁₅=0.9425	delA=0.0575
1000Genomes	Europe	Sub	1006	(A)₁₅=0.7087	delA=0.2913
1000Genomes	South Asian	Sub	978	(A)₁₅=0.812	delA=0.188
1000Genomes	American	Sub	694	(A)₁₅=0.808	delA=0.192
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(A)₁₅=0.7405	delA=0.2595
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(A)₁₅=0.7373	delA=0.2627

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 16	NC_000016.10:g.14579995_14579997del
GRCh38.p14 chr 16	NC_000016.10:g.14579996_14579997del
GRCh38.p14 chr 16	NC_000016.10:g.14579997del
GRCh38.p14 chr 16	NC_000016.10:g.14579997dup
GRCh38.p14 chr 16	NC_000016.10:g.14579996_14579997dup
GRCh38.p14 chr 16	NC_000016.10:g.14579987_14579997dup
GRCh37.p13 chr 16	NC_000016.9:g.14673852_14673854del
GRCh37.p13 chr 16	NC_000016.9:g.14673853_14673854del
GRCh37.p13 chr 16	NC_000016.9:g.14673854del
GRCh37.p13 chr 16	NC_000016.9:g.14673854dup
GRCh37.p13 chr 16	NC_000016.9:g.14673853_14673854dup
GRCh37.p13 chr 16	NC_000016.9:g.14673844_14673854dup
A RefSeqGene (LRG_1286)	NG_042871.1:g.55287_55289del
A RefSeqGene (LRG_1286)	NG_042871.1:g.55288_55289del
A RefSeqGene (LRG_1286)	NG_042871.1:g.55289del
A RefSeqGene (LRG_1286)	NG_042871.1:g.55289dup
A RefSeqGene (LRG_1286)	NG_042871.1:g.55288_55289dup
A RefSeqGene (LRG_1286)	NG_042871.1:g.55279_55289dup
GRCh38.p14 chr 16 alt locus HSCHR16_1_CTG1	NT_187607.1:g.152852_152854del
GRCh38.p14 chr 16 alt locus HSCHR16_1_CTG1	NT_187607.1:g.152853_152854del
GRCh38.p14 chr 16 alt locus HSCHR16_1_CTG1	NT_187607.1:g.152854del
GRCh38.p14 chr 16 alt locus HSCHR16_1_CTG1	NT_187607.1:g.152854dup
GRCh38.p14 chr 16 alt locus HSCHR16_1_CTG1	NT_187607.1:g.152853_152854dup
GRCh38.p14 chr 16 alt locus HSCHR16_1_CTG1	NT_187607.1:g.152844_152854dup

Gene: PARN, poly(A)-specific ribonuclease (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PARN transcript variant 2	NM_001134477.3:c.1079+889… NM_001134477.3:c.1079+889_1079+891del	N/A	Intron Variant
PARN transcript variant 3	NM_001242992.2:c.1124+889… NM_001242992.2:c.1124+889_1124+891del	N/A	Intron Variant
PARN transcript variant 1	NM_002582.4:c.1262+889_12… NM_002582.4:c.1262+889_1262+891del	N/A	Intron Variant
PARN transcript variant X9	XM_011522514.3:c.1262+889… XM_011522514.3:c.1262+889_1262+891del	N/A	Intron Variant
PARN transcript variant X1	XM_047434181.1:c.1262+889… XM_047434181.1:c.1262+889_1262+891del	N/A	Intron Variant
PARN transcript variant X2	XM_047434182.1:c.1262+889… XM_047434182.1:c.1262+889_1262+891del	N/A	Intron Variant
PARN transcript variant X6	XM_047434183.1:c.1079+889… XM_047434183.1:c.1079+889_1079+891del	N/A	Intron Variant
PARN transcript variant X7	XM_047434184.1:c.1079+889… XM_047434184.1:c.1079+889_1079+891del	N/A	Intron Variant
PARN transcript variant X10	XM_047434185.1:c.	N/A	Genic Downstream Transcript Variant
PARN transcript variant X3	XR_007064881.1:n.	N/A	Intron Variant
PARN transcript variant X4	XR_007064882.1:n.	N/A	Intron Variant
PARN transcript variant X5	XR_007064883.1:n.	N/A	Intron Variant
PARN transcript variant X8	XR_007064884.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₅=	delAAA	delAA	delA	dupA	dupAA	dup(A)₁₁
GRCh38.p14 chr 16	NC_000016.10:g.14579983_14579997=	NC_000016.10:g.14579995_14579997del	NC_000016.10:g.14579996_14579997del	NC_000016.10:g.14579997del	NC_000016.10:g.14579997dup	NC_000016.10:g.14579996_14579997dup	NC_000016.10:g.14579987_14579997dup
GRCh37.p13 chr 16	NC_000016.9:g.14673840_14673854=	NC_000016.9:g.14673852_14673854del	NC_000016.9:g.14673853_14673854del	NC_000016.9:g.14673854del	NC_000016.9:g.14673854dup	NC_000016.9:g.14673853_14673854dup	NC_000016.9:g.14673844_14673854dup
A RefSeqGene (LRG_1286)	NG_042871.1:g.55275_55289=	NG_042871.1:g.55287_55289del	NG_042871.1:g.55288_55289del	NG_042871.1:g.55289del	NG_042871.1:g.55289dup	NG_042871.1:g.55288_55289dup	NG_042871.1:g.55279_55289dup
GRCh38.p14 chr 16 alt locus HSCHR16_1_CTG1	NT_187607.1:g.152840_152854=	NT_187607.1:g.152852_152854del	NT_187607.1:g.152853_152854del	NT_187607.1:g.152854del	NT_187607.1:g.152854dup	NT_187607.1:g.152853_152854dup	NT_187607.1:g.152844_152854dup
PARN transcript variant 2	NM_001134477.2:c.1079+891=	NM_001134477.2:c.1079+889_1079+891del	NM_001134477.2:c.1079+890_1079+891del	NM_001134477.2:c.1079+891del	NM_001134477.2:c.1079+891dup	NM_001134477.2:c.1079+890_1079+891dup	NM_001134477.2:c.1079+881_1079+891dup
PARN transcript variant 2	NM_001134477.3:c.1079+891=	NM_001134477.3:c.1079+889_1079+891del	NM_001134477.3:c.1079+890_1079+891del	NM_001134477.3:c.1079+891del	NM_001134477.3:c.1079+891dup	NM_001134477.3:c.1079+890_1079+891dup	NM_001134477.3:c.1079+881_1079+891dup
PARN transcript variant 3	NM_001242992.1:c.1124+891=	NM_001242992.1:c.1124+889_1124+891del	NM_001242992.1:c.1124+890_1124+891del	NM_001242992.1:c.1124+891del	NM_001242992.1:c.1124+891dup	NM_001242992.1:c.1124+890_1124+891dup	NM_001242992.1:c.1124+881_1124+891dup
PARN transcript variant 3	NM_001242992.2:c.1124+891=	NM_001242992.2:c.1124+889_1124+891del	NM_001242992.2:c.1124+890_1124+891del	NM_001242992.2:c.1124+891del	NM_001242992.2:c.1124+891dup	NM_001242992.2:c.1124+890_1124+891dup	NM_001242992.2:c.1124+881_1124+891dup
PARN transcript variant 1	NM_002582.3:c.1262+891=	NM_002582.3:c.1262+889_1262+891del	NM_002582.3:c.1262+890_1262+891del	NM_002582.3:c.1262+891del	NM_002582.3:c.1262+891dup	NM_002582.3:c.1262+890_1262+891dup	NM_002582.3:c.1262+881_1262+891dup
PARN transcript variant 1	NM_002582.4:c.1262+891=	NM_002582.4:c.1262+889_1262+891del	NM_002582.4:c.1262+890_1262+891del	NM_002582.4:c.1262+891del	NM_002582.4:c.1262+891dup	NM_002582.4:c.1262+890_1262+891dup	NM_002582.4:c.1262+881_1262+891dup
PARN transcript variant X1	XM_005255341.1:c.737+891=	XM_005255341.1:c.737+889_737+891del	XM_005255341.1:c.737+890_737+891del	XM_005255341.1:c.737+891del	XM_005255341.1:c.737+891dup	XM_005255341.1:c.737+890_737+891dup	XM_005255341.1:c.737+881_737+891dup
PARN transcript variant X9	XM_011522514.3:c.1262+891=	XM_011522514.3:c.1262+889_1262+891del	XM_011522514.3:c.1262+890_1262+891del	XM_011522514.3:c.1262+891del	XM_011522514.3:c.1262+891dup	XM_011522514.3:c.1262+890_1262+891dup	XM_011522514.3:c.1262+881_1262+891dup
PARN transcript variant X1	XM_047434181.1:c.1262+891=	XM_047434181.1:c.1262+889_1262+891del	XM_047434181.1:c.1262+890_1262+891del	XM_047434181.1:c.1262+891del	XM_047434181.1:c.1262+891dup	XM_047434181.1:c.1262+890_1262+891dup	XM_047434181.1:c.1262+881_1262+891dup
PARN transcript variant X2	XM_047434182.1:c.1262+891=	XM_047434182.1:c.1262+889_1262+891del	XM_047434182.1:c.1262+890_1262+891del	XM_047434182.1:c.1262+891del	XM_047434182.1:c.1262+891dup	XM_047434182.1:c.1262+890_1262+891dup	XM_047434182.1:c.1262+881_1262+891dup
PARN transcript variant X6	XM_047434183.1:c.1079+891=	XM_047434183.1:c.1079+889_1079+891del	XM_047434183.1:c.1079+890_1079+891del	XM_047434183.1:c.1079+891del	XM_047434183.1:c.1079+891dup	XM_047434183.1:c.1079+890_1079+891dup	XM_047434183.1:c.1079+881_1079+891dup
PARN transcript variant X7	XM_047434184.1:c.1079+891=	XM_047434184.1:c.1079+889_1079+891del	XM_047434184.1:c.1079+890_1079+891del	XM_047434184.1:c.1079+891del	XM_047434184.1:c.1079+891dup	XM_047434184.1:c.1079+890_1079+891dup	XM_047434184.1:c.1079+881_1079+891dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

32 SubSNP, 16 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	1000GENOMES	ss1375600010	Aug 21, 2014 (142)
2	EVA_UK10K_ALSPAC	ss1708482761	Apr 01, 2015 (144)
3	EVA_UK10K_TWINSUK	ss1708482785	Apr 01, 2015 (144)
4	PADH-LAB_SPU	ss1751353269	Sep 08, 2015 (146)
5	SWEGEN	ss3014135636	Nov 08, 2017 (151)
6	EVA_DECODE	ss3698926512	Jul 13, 2019 (153)
7	EVA_DECODE	ss3698926513	Jul 13, 2019 (153)
8	EVA_DECODE	ss3698926514	Jul 13, 2019 (153)
9	EVA_DECODE	ss3698926515	Jul 13, 2019 (153)
10	ACPOP	ss3741374660	Jul 13, 2019 (153)
11	ACPOP	ss3741374661	Jul 13, 2019 (153)
12	PACBIO	ss3787992680	Jul 13, 2019 (153)
13	KHV_HUMAN_GENOMES	ss3819036140	Jul 13, 2019 (153)
14	EVA	ss3834497659	Apr 27, 2020 (154)
15	EVA	ss3840854206	Apr 27, 2020 (154)
16	EVA	ss3846345630	Apr 27, 2020 (154)
17	GNOMAD	ss4297598831	Apr 26, 2021 (155)
18	GNOMAD	ss4297598832	Apr 26, 2021 (155)
19	GNOMAD	ss4297598833	Apr 26, 2021 (155)
20	GNOMAD	ss4297598834	Apr 26, 2021 (155)
21	GNOMAD	ss4297598835	Apr 26, 2021 (155)
22	GNOMAD	ss4297598836	Apr 26, 2021 (155)
23	TOMMO_GENOMICS	ss5218615124	Apr 26, 2021 (155)
24	TOMMO_GENOMICS	ss5218615125	Apr 26, 2021 (155)
25	1000G_HIGH_COVERAGE	ss5300286687	Oct 17, 2022 (156)
26	1000G_HIGH_COVERAGE	ss5300286689	Oct 17, 2022 (156)
27	HUGCELL_USP	ss5493800490	Oct 17, 2022 (156)
28	HUGCELL_USP	ss5493800491	Oct 17, 2022 (156)
29	TOMMO_GENOMICS	ss5773151508	Oct 17, 2022 (156)
30	TOMMO_GENOMICS	ss5773151509	Oct 17, 2022 (156)
31	YY_MCH	ss5815794931	Oct 17, 2022 (156)
32	EVA	ss5949986474	Oct 17, 2022 (156)
33	1000Genomes	NC_000016.9 - 14673840	Oct 12, 2018 (152)
34	The Avon Longitudinal Study of Parents and Children	NC_000016.9 - 14673840	Oct 12, 2018 (152)
35	gnomAD - Genomes Submission ignored due to conflicting rows: Row 484058128 (NC_000016.10:14579982::A 2248/105622) Row 484058129 (NC_000016.10:14579982::AA 6/105734) Row 484058130 (NC_000016.10:14579982::AAAAAAAAAAA 1/105736)...	-	Apr 26, 2021 (155)
36	gnomAD - Genomes Submission ignored due to conflicting rows: Row 484058128 (NC_000016.10:14579982::A 2248/105622) Row 484058129 (NC_000016.10:14579982::AA 6/105734) Row 484058130 (NC_000016.10:14579982::AAAAAAAAAAA 1/105736)...	-	Apr 26, 2021 (155)
37	gnomAD - Genomes Submission ignored due to conflicting rows: Row 484058128 (NC_000016.10:14579982::A 2248/105622) Row 484058129 (NC_000016.10:14579982::AA 6/105734) Row 484058130 (NC_000016.10:14579982::AAAAAAAAAAA 1/105736)...	-	Apr 26, 2021 (155)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 484058128 (NC_000016.10:14579982::A 2248/105622) Row 484058129 (NC_000016.10:14579982::AA 6/105734) Row 484058130 (NC_000016.10:14579982::AAAAAAAAAAA 1/105736)...	-	Apr 26, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 484058128 (NC_000016.10:14579982::A 2248/105622) Row 484058129 (NC_000016.10:14579982::AA 6/105734) Row 484058130 (NC_000016.10:14579982::AAAAAAAAAAA 1/105736)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 484058128 (NC_000016.10:14579982::A 2248/105622) Row 484058129 (NC_000016.10:14579982::AA 6/105734) Row 484058130 (NC_000016.10:14579982::AAAAAAAAAAA 1/105736)...	-	Apr 26, 2021 (155)
41	Northern Sweden Submission ignored due to conflicting rows: Row 14659525 (NC_000016.9:14673839:A: 144/534) Row 14659526 (NC_000016.9:14673839::A 10/534)	-	Jul 13, 2019 (153)
42	Northern Sweden Submission ignored due to conflicting rows: Row 14659525 (NC_000016.9:14673839:A: 144/534) Row 14659526 (NC_000016.9:14673839::A 10/534)	-	Jul 13, 2019 (153)
43	8.3KJPN Submission ignored due to conflicting rows: Row 76584431 (NC_000016.9:14673839:A: 148/16760) Row 76584432 (NC_000016.9:14673839::A 11/16760)	-	Apr 26, 2021 (155)
44	8.3KJPN Submission ignored due to conflicting rows: Row 76584431 (NC_000016.9:14673839:A: 148/16760) Row 76584432 (NC_000016.9:14673839::A 11/16760)	-	Apr 26, 2021 (155)
45	14KJPN Submission ignored due to conflicting rows: Row 106988612 (NC_000016.10:14579982:A: 246/28258) Row 106988613 (NC_000016.10:14579982::A 18/28258)	-	Oct 17, 2022 (156)
46	14KJPN Submission ignored due to conflicting rows: Row 106988612 (NC_000016.10:14579982:A: 246/28258) Row 106988613 (NC_000016.10:14579982::A 18/28258)	-	Oct 17, 2022 (156)
47	UK 10K study - Twins	NC_000016.9 - 14673840	Oct 12, 2018 (152)
48	ALFA	NC_000016.10 - 14579983	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3698926515, ss4297598836	NC_000016.10:14579982:AAA:	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss4297598835	NC_000016.10:14579982:AA:	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
6292021842	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3698926514	NC_000016.10:14579983:AA:	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
68700081, 38148915, 38148915, ss1375600010, ss1708482761, ss1708482785, ss1751353269, ss3014135636, ss3741374660, ss3787992680, ss3834497659, ss3840854206, ss5218615124, ss5949986474	NC_000016.9:14673839:A:	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3819036140, ss3846345630, ss4297598834, ss5300286687, ss5493800490, ss5773151508	NC_000016.10:14579982:A:	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
6292021842	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3698926513	NC_000016.10:14579984:A:	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3741374661, ss5218615125	NC_000016.9:14673839::A	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss4297598831, ss5300286689, ss5493800491, ss5773151509, ss5815794931	NC_000016.10:14579982::A	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
6292021842	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3698926512	NC_000016.10:14579985::A	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss4297598832	NC_000016.10:14579982::AA	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
6292021842	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss4297598833	NC_000016.10:14579982::AAAAAAAAAAA	NC_000016.10:14579982:AAAAAAAAAAAA… NC_000016.10:14579982:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs534284469

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs534284469