Name: rs377158860
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs377158860

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chrX:73077723-73077752 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(AC)₈ / del(AC)₅ / del(AC)₄ / d…
del(AC)₈ / del(AC)₅ / del(AC)₄ / del(AC)₃ / delACAC / delAC / dupAC / dupACAC / dup(AC)₃ / dup(AC)₄
Variation Type: Indel Insertion and Deletion
Frequency: dup(AC)₄=0.000136 (36/264690, TOPMED)
delAC=0.4491 (3087/6874, ALFA)
(AC)₁₅=0.4972 (1877/3775, 1000G) (+ 1 more)
delACAC=0.0865 (250/2889, ALSPAC)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: PABPC1L2A : 3 Prime UTR Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	6874	ACACACACACACACACACACACACACACAC=0.5196	ACACACACACACAC=0.0000, ACACACACACACACACACAC=0.0000, ACACACACACACACACACACAC=0.0000, ACACACACACACACACACACACAC=0.0246, ACACACACACACACACACACACACAC=0.0028, ACACACACACACACACACACACACACAC=0.4491, ACACACACACACACACACACACACACACACAC=0.0033, ACACACACACACACACACACACACACACACACAC=0.0006, ACACACACACACACACACACACACACACACACACAC=0.0000, ACACACACACACACACACACACACACACACACACACAC=0.0000	0.471825	0.392019	0.136156	32
European	Sub	5492	ACACACACACACACACACACACACACACAC=0.3997	ACACACACACACAC=0.0000, ACACACACACACACACACAC=0.0000, ACACACACACACACACACACAC=0.0000, ACACACACACACACACACACACAC=0.0308, ACACACACACACACACACACACACAC=0.0035, ACACACACACACACACACACACACACAC=0.5612, ACACACACACACACACACACACACACACACAC=0.0042, ACACACACACACACACACACACACACACACACAC=0.0007, ACACACACACACACACACACACACACACACACACAC=0.0000, ACACACACACACACACACACACACACACACACACACAC=0.0000	0.332176	0.495756	0.172068	32
African	Sub	956	ACACACACACACACACACACACACACACAC=1.000	ACACACACACACAC=0.000, ACACACACACACACACACAC=0.000, ACACACACACACACACACACAC=0.000, ACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACACACAC=0.000	1.0	0.0	0.0	N/A
African Others	Sub	38	ACACACACACACACACACACACACACACAC=1.00	ACACACACACACAC=0.00, ACACACACACACACACACAC=0.00, ACACACACACACACACACACAC=0.00, ACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACACAC=0.00	1.0	0.0	0.0	N/A
African American	Sub	918	ACACACACACACACACACACACACACACAC=1.000	ACACACACACACAC=0.000, ACACACACACACACACACAC=0.000, ACACACACACACACACACACAC=0.000, ACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACACACAC=0.000	1.0	0.0	0.0	N/A
Asian	Sub	64	ACACACACACACACACACACACACACACAC=1.00	ACACACACACACAC=0.00, ACACACACACACACACACAC=0.00, ACACACACACACACACACACAC=0.00, ACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACACAC=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	52	ACACACACACACACACACACACACACACAC=1.00	ACACACACACACAC=0.00, ACACACACACACACACACAC=0.00, ACACACACACACACACACACAC=0.00, ACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACACAC=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	12	ACACACACACACACACACACACACACACAC=1.00	ACACACACACACAC=0.00, ACACACACACACACACACAC=0.00, ACACACACACACACACACACAC=0.00, ACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACACAC=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	22	ACACACACACACACACACACACACACACAC=1.00	ACACACACACACAC=0.00, ACACACACACACACACACAC=0.00, ACACACACACACACACACACAC=0.00, ACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACACAC=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	188	ACACACACACACACACACACACACACACAC=1.000	ACACACACACACAC=0.000, ACACACACACACACACACAC=0.000, ACACACACACACACACACACAC=0.000, ACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACACACAC=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	20	ACACACACACACACACACACACACACACAC=1.00	ACACACACACACAC=0.00, ACACACACACACACACACAC=0.00, ACACACACACACACACACACAC=0.00, ACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACAC=0.00, ACACACACACACACACACACACACACACACACACACAC=0.00	1.0	0.0	0.0	N/A
Other	Sub	132	ACACACACACACACACACACACACACACAC=0.962	ACACACACACACAC=0.000, ACACACACACACACACACAC=0.000, ACACACACACACACACACACAC=0.000, ACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACAC=0.038, ACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACACAC=0.000, ACACACACACACACACACACACACACACACACACACAC=0.000	0.954545	0.030303	0.015152	22

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	- No frequency provided	dup(AC)₄=0.000136
Allele Frequency Aggregator	Total	Global	6874	(AC)₁₅=0.5196	del(AC)₈=0.0000, del(AC)₅=0.0000, del(AC)₄=0.0000, del(AC)₃=0.0246, delACAC=0.0028, delAC=0.4491, dupAC=0.0033, dupACAC=0.0006, dup(AC)₃=0.0000, dup(AC)₄=0.0000
Allele Frequency Aggregator	European	Sub	5492	(AC)₁₅=0.3997	del(AC)₈=0.0000, del(AC)₅=0.0000, del(AC)₄=0.0000, del(AC)₃=0.0308, delACAC=0.0035, delAC=0.5612, dupAC=0.0042, dupACAC=0.0007, dup(AC)₃=0.0000, dup(AC)₄=0.0000
Allele Frequency Aggregator	African	Sub	956	(AC)₁₅=1.000	del(AC)₈=0.000, del(AC)₅=0.000, del(AC)₄=0.000, del(AC)₃=0.000, delACAC=0.000, delAC=0.000, dupAC=0.000, dupACAC=0.000, dup(AC)₃=0.000, dup(AC)₄=0.000
Allele Frequency Aggregator	Latin American 2	Sub	188	(AC)₁₅=1.000	del(AC)₈=0.000, del(AC)₅=0.000, del(AC)₄=0.000, del(AC)₃=0.000, delACAC=0.000, delAC=0.000, dupAC=0.000, dupACAC=0.000, dup(AC)₃=0.000, dup(AC)₄=0.000
Allele Frequency Aggregator	Other	Sub	132	(AC)₁₅=0.962	del(AC)₈=0.000, del(AC)₅=0.000, del(AC)₄=0.000, del(AC)₃=0.000, delACAC=0.000, delAC=0.038, dupAC=0.000, dupACAC=0.000, dup(AC)₃=0.000, dup(AC)₄=0.000
Allele Frequency Aggregator	Asian	Sub	64	(AC)₁₅=1.00	del(AC)₈=0.00, del(AC)₅=0.00, del(AC)₄=0.00, del(AC)₃=0.00, delACAC=0.00, delAC=0.00, dupAC=0.00, dupACAC=0.00, dup(AC)₃=0.00, dup(AC)₄=0.00
Allele Frequency Aggregator	Latin American 1	Sub	22	(AC)₁₅=1.00	del(AC)₈=0.00, del(AC)₅=0.00, del(AC)₄=0.00, del(AC)₃=0.00, delACAC=0.00, delAC=0.00, dupAC=0.00, dupACAC=0.00, dup(AC)₃=0.00, dup(AC)₄=0.00
Allele Frequency Aggregator	South Asian	Sub	20	(AC)₁₅=1.00	del(AC)₈=0.00, del(AC)₅=0.00, del(AC)₄=0.00, del(AC)₃=0.00, delACAC=0.00, delAC=0.00, dupAC=0.00, dupACAC=0.00, dup(AC)₃=0.00, dup(AC)₄=0.00
1000Genomes	Global	Study-wide	3775	(AC)₁₅=0.4972	delAC=0.5028
1000Genomes	African	Sub	1003	(AC)₁₅=0.7079	delAC=0.2921
1000Genomes	Europe	Sub	766	(AC)₁₅=0.191	delAC=0.809
1000Genomes	East Asian	Sub	764	(AC)₁₅=0.777	delAC=0.223
1000Genomes	South Asian	Sub	718	(AC)₁₅=0.274	delAC=0.726
1000Genomes	American	Sub	524	(AC)₁₅=0.439	delAC=0.561
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	2889	(AC)₁₅=0.9135	delACAC=0.0865

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[7]
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[10]
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[11]
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[12]
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[13]
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[14]
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[16]
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[17]
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[18]
GRCh38.p14 chr X	NC_000023.11:g.73077723AC[19]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[7]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[10]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[11]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[12]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[13]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[14]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[16]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[17]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[18]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740AC[19]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[7]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[10]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[11]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[12]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[13]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[14]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[16]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[17]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[18]
GRCh37.p13 chr X	NC_000023.10:g.72297562AC[19]

Gene: PABPC1L2A, poly(A) binding protein cytoplasmic 1 like 2A (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PABPC1L2A transcript	NM_001012977.3:c.1032_1… NM_001012977.3:c.1032_1061=	N/A	3 Prime UTR Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(AC)₁₅=	del(AC)₈	del(AC)₅	del(AC)₄	del(AC)₃	delACAC	delAC	dupAC	dupACAC	dup(AC)₃	dup(AC)₄
GRCh38.p14 chr X	NC_000023.11:g.73077723_73077752=	NC_000023.11:g.73077723AC[7]	NC_000023.11:g.73077723AC[10]	NC_000023.11:g.73077723AC[11]	NC_000023.11:g.73077723AC[12]	NC_000023.11:g.73077723AC[13]	NC_000023.11:g.73077723AC[14]	NC_000023.11:g.73077723AC[16]	NC_000023.11:g.73077723AC[17]	NC_000023.11:g.73077723AC[18]	NC_000023.11:g.73077723AC[19]
GRCh37.p13 chr X fix patch HG1438_PATCH	NW_004070882.1:g.766740_766769=	NW_004070882.1:g.766740AC[7]	NW_004070882.1:g.766740AC[10]	NW_004070882.1:g.766740AC[11]	NW_004070882.1:g.766740AC[12]	NW_004070882.1:g.766740AC[13]	NW_004070882.1:g.766740AC[14]	NW_004070882.1:g.766740AC[16]	NW_004070882.1:g.766740AC[17]	NW_004070882.1:g.766740AC[18]	NW_004070882.1:g.766740AC[19]
GRCh37.p13 chr X	NC_000023.10:g.72297562_72297591=	NC_000023.10:g.72297562AC[7]	NC_000023.10:g.72297562AC[10]	NC_000023.10:g.72297562AC[11]	NC_000023.10:g.72297562AC[12]	NC_000023.10:g.72297562AC[13]	NC_000023.10:g.72297562AC[14]	NC_000023.10:g.72297562AC[16]	NC_000023.10:g.72297562AC[17]	NC_000023.10:g.72297562AC[18]	NC_000023.10:g.72297562AC[19]
PABPC1L2A transcript	NM_001012977.3:c.1032_1061=	NM_001012977.3:c.*1032GT[7]	NM_001012977.3:c.*1032GT[10]	NM_001012977.3:c.*1032GT[11]	NM_001012977.3:c.*1032GT[12]	NM_001012977.3:c.*1032GT[13]	NM_001012977.3:c.*1032GT[14]	NM_001012977.3:c.*1032GT[16]	NM_001012977.3:c.*1032GT[17]	NM_001012977.3:c.*1032GT[18]	NM_001012977.3:c.*1032GT[19]
PABPC1L2A transcript	NM_001012977.2:c.1032_1061=	NM_001012977.2:c.*1032GT[7]	NM_001012977.2:c.*1032GT[10]	NM_001012977.2:c.*1032GT[11]	NM_001012977.2:c.*1032GT[12]	NM_001012977.2:c.*1032GT[13]	NM_001012977.2:c.*1032GT[14]	NM_001012977.2:c.*1032GT[16]	NM_001012977.2:c.*1032GT[17]	NM_001012977.2:c.*1032GT[18]	NM_001012977.2:c.*1032GT[19]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

49 SubSNP, 29 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	GMI	ss478844451	Oct 12, 2018 (152)
2	BILGI_BIOE	ss666780589	Apr 25, 2013 (138)
3	1000GENOMES	ss1554841204	Apr 09, 2015 (144)
4	EVA_UK10K_ALSPAC	ss1709755548	Apr 09, 2015 (144)
5	EVA_UK10K_TWINSUK	ss1709755670	Apr 09, 2015 (144)
6	EVA_UK10K_TWINSUK	ss1710865505	Apr 09, 2015 (144)
7	EVA_UK10K_ALSPAC	ss1710865506	Apr 09, 2015 (144)
8	TMC_SNPDB	ss1997232157	Sep 28, 2016 (149)
9	TMC_SNPDB	ss1997232159	Sep 28, 2016 (149)
10	TMC_SNPDB	ss1997232161	Sep 28, 2016 (149)
11	SWEGEN	ss3020133912	Oct 12, 2018 (152)
12	MCHAISSO	ss3064370183	Nov 08, 2017 (151)
13	MCHAISSO	ss3065265279	Nov 08, 2017 (151)
14	URBANLAB	ss3651286441	Oct 12, 2018 (152)
15	KHV_HUMAN_GENOMES	ss3823070853	Jul 13, 2019 (153)
16	EVA	ss3836199035	Apr 27, 2020 (154)
17	EVA	ss3841707149	Apr 27, 2020 (154)
18	EVA	ss3847230597	Apr 27, 2020 (154)
19	GNOMAD	ss4373406805	Apr 27, 2021 (155)
20	GNOMAD	ss4373406806	Apr 27, 2021 (155)
21	GNOMAD	ss4373406807	Apr 27, 2021 (155)
22	GNOMAD	ss4373406808	Apr 27, 2021 (155)
23	GNOMAD	ss4373406809	Apr 27, 2021 (155)
24	GNOMAD	ss4373406810	Apr 27, 2021 (155)
25	GNOMAD	ss4373406811	Apr 27, 2021 (155)
26	GNOMAD	ss4373406812	Apr 27, 2021 (155)
27	GNOMAD	ss4373406813	Apr 27, 2021 (155)
28	TOPMED	ss5126433072	Apr 27, 2021 (155)
29	TOMMO_GENOMICS	ss5234905516	Apr 27, 2021 (155)
30	TOMMO_GENOMICS	ss5234905517	Apr 27, 2021 (155)
31	TOMMO_GENOMICS	ss5234905518	Apr 27, 2021 (155)
32	TOMMO_GENOMICS	ss5234905519	Apr 27, 2021 (155)
33	TOMMO_GENOMICS	ss5234905520	Apr 27, 2021 (155)
34	1000G_HIGH_COVERAGE	ss5312865579	Oct 17, 2022 (156)
35	1000G_HIGH_COVERAGE	ss5312865580	Oct 17, 2022 (156)
36	1000G_HIGH_COVERAGE	ss5312865581	Oct 17, 2022 (156)
37	1000G_HIGH_COVERAGE	ss5312865582	Oct 17, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5312865583	Oct 17, 2022 (156)
39	HUGCELL_USP	ss5504465258	Oct 17, 2022 (156)
40	HUGCELL_USP	ss5504465259	Oct 17, 2022 (156)
41	HUGCELL_USP	ss5504465260	Oct 17, 2022 (156)
42	HUGCELL_USP	ss5504465261	Oct 17, 2022 (156)
43	HUGCELL_USP	ss5504465262	Oct 17, 2022 (156)
44	TOMMO_GENOMICS	ss5796864724	Oct 17, 2022 (156)
45	TOMMO_GENOMICS	ss5796864725	Oct 17, 2022 (156)
46	TOMMO_GENOMICS	ss5796864726	Oct 17, 2022 (156)
47	TOMMO_GENOMICS	ss5796864727	Oct 17, 2022 (156)
48	TOMMO_GENOMICS	ss5796864729	Oct 17, 2022 (156)
49	EVA	ss5981160752	Oct 17, 2022 (156)
50	1000Genomes	NC_000023.10 - 72297562	Oct 12, 2018 (152)
51	The Avon Longitudinal Study of Parents and Children	NC_000023.10 - 72297562	Oct 12, 2018 (152)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 583357458 (NC_000023.11:73077722::AC 6663/91464) Row 583357459 (NC_000023.11:73077722::ACAC 497/91556) Row 583357460 (NC_000023.11:73077722::ACACAC 43/91565)...	-	Apr 27, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 583357458 (NC_000023.11:73077722::AC 6663/91464) Row 583357459 (NC_000023.11:73077722::ACAC 497/91556) Row 583357460 (NC_000023.11:73077722::ACACAC 43/91565)...	-	Apr 27, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 583357458 (NC_000023.11:73077722::AC 6663/91464) Row 583357459 (NC_000023.11:73077722::ACAC 497/91556) Row 583357460 (NC_000023.11:73077722::ACACAC 43/91565)...	-	Apr 27, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 583357458 (NC_000023.11:73077722::AC 6663/91464) Row 583357459 (NC_000023.11:73077722::ACAC 497/91556) Row 583357460 (NC_000023.11:73077722::ACACAC 43/91565)...	-	Apr 27, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 583357458 (NC_000023.11:73077722::AC 6663/91464) Row 583357459 (NC_000023.11:73077722::ACAC 497/91556) Row 583357460 (NC_000023.11:73077722::ACACAC 43/91565)...	-	Apr 27, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 583357458 (NC_000023.11:73077722::AC 6663/91464) Row 583357459 (NC_000023.11:73077722::ACAC 497/91556) Row 583357460 (NC_000023.11:73077722::ACACAC 43/91565)...	-	Apr 27, 2021 (155)
58	gnomAD - Genomes Submission ignored due to conflicting rows: Row 583357458 (NC_000023.11:73077722::AC 6663/91464) Row 583357459 (NC_000023.11:73077722::ACAC 497/91556) Row 583357460 (NC_000023.11:73077722::ACACAC 43/91565)...	-	Apr 27, 2021 (155)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 583357458 (NC_000023.11:73077722::AC 6663/91464) Row 583357459 (NC_000023.11:73077722::ACAC 497/91556) Row 583357460 (NC_000023.11:73077722::ACACAC 43/91565)...	-	Apr 27, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 583357458 (NC_000023.11:73077722::AC 6663/91464) Row 583357459 (NC_000023.11:73077722::ACAC 497/91556) Row 583357460 (NC_000023.11:73077722::ACACAC 43/91565)...	-	Apr 27, 2021 (155)
61	8.3KJPN Submission ignored due to conflicting rows: Row 92874823 (NC_000023.10:72297561::AC 2671/12841) Row 92874824 (NC_000023.10:72297561:AC: 735/12841) Row 92874825 (NC_000023.10:72297561:ACACAC: 64/12841)...	-	Apr 27, 2021 (155)
62	8.3KJPN Submission ignored due to conflicting rows: Row 92874823 (NC_000023.10:72297561::AC 2671/12841) Row 92874824 (NC_000023.10:72297561:AC: 735/12841) Row 92874825 (NC_000023.10:72297561:ACACAC: 64/12841)...	-	Apr 27, 2021 (155)
63	8.3KJPN Submission ignored due to conflicting rows: Row 92874823 (NC_000023.10:72297561::AC 2671/12841) Row 92874824 (NC_000023.10:72297561:AC: 735/12841) Row 92874825 (NC_000023.10:72297561:ACACAC: 64/12841)...	-	Apr 27, 2021 (155)
64	8.3KJPN Submission ignored due to conflicting rows: Row 92874823 (NC_000023.10:72297561::AC 2671/12841) Row 92874824 (NC_000023.10:72297561:AC: 735/12841) Row 92874825 (NC_000023.10:72297561:ACACAC: 64/12841)...	-	Apr 27, 2021 (155)
65	8.3KJPN Submission ignored due to conflicting rows: Row 92874823 (NC_000023.10:72297561::AC 2671/12841) Row 92874824 (NC_000023.10:72297561:AC: 735/12841) Row 92874825 (NC_000023.10:72297561:ACACAC: 64/12841)...	-	Apr 27, 2021 (155)
66	14KJPN Submission ignored due to conflicting rows: Row 130701828 (NC_000023.11:73077722::AC 4672/22222) Row 130701829 (NC_000023.11:73077722:AC: 1279/22222) Row 130701830 (NC_000023.11:73077722:ACACAC: 91/22222)...	-	Oct 17, 2022 (156)
67	14KJPN Submission ignored due to conflicting rows: Row 130701828 (NC_000023.11:73077722::AC 4672/22222) Row 130701829 (NC_000023.11:73077722:AC: 1279/22222) Row 130701830 (NC_000023.11:73077722:ACACAC: 91/22222)...	-	Oct 17, 2022 (156)
68	14KJPN Submission ignored due to conflicting rows: Row 130701828 (NC_000023.11:73077722::AC 4672/22222) Row 130701829 (NC_000023.11:73077722:AC: 1279/22222) Row 130701830 (NC_000023.11:73077722:ACACAC: 91/22222)...	-	Oct 17, 2022 (156)
69	14KJPN Submission ignored due to conflicting rows: Row 130701828 (NC_000023.11:73077722::AC 4672/22222) Row 130701829 (NC_000023.11:73077722:AC: 1279/22222) Row 130701830 (NC_000023.11:73077722:ACACAC: 91/22222)...	-	Oct 17, 2022 (156)
70	14KJPN Submission ignored due to conflicting rows: Row 130701828 (NC_000023.11:73077722::AC 4672/22222) Row 130701829 (NC_000023.11:73077722:AC: 1279/22222) Row 130701830 (NC_000023.11:73077722:ACACAC: 91/22222)...	-	Oct 17, 2022 (156)
71	TopMed	NC_000023.11 - 73077723	Apr 27, 2021 (155)
72	UK 10K study - Twins	-	Oct 12, 2018 (152)
73	UK 10K study - Twins Submission ignored due to conflicting rows: Row 45695387 (NC_000023.10:72297561:ACAC: 389/3708) Row 45695388 (NC_000023.10:72297563:AC: 2568/3708)	-	Apr 27, 2020 (154)
74	A Vietnamese Genetic Variation Database Submission ignored due to conflicting rows: Row 10053491 (NC_000023.10:72297561::AC 10/47) Row 10053492 (NC_000023.10:72297561:AC: 10/48) Row 10053493 (NC_000023.10:72297561:ACACAC: 10/48)...	-	Jul 13, 2019 (153)
75	A Vietnamese Genetic Variation Database Submission ignored due to conflicting rows: Row 10053491 (NC_000023.10:72297561::AC 10/47) Row 10053492 (NC_000023.10:72297561:AC: 10/48) Row 10053493 (NC_000023.10:72297561:ACACAC: 10/48)...	-	Jul 13, 2019 (153)
76	A Vietnamese Genetic Variation Database Submission ignored due to conflicting rows: Row 10053491 (NC_000023.10:72297561::AC 10/47) Row 10053492 (NC_000023.10:72297561:AC: 10/48) Row 10053493 (NC_000023.10:72297561:ACACAC: 10/48)...	-	Jul 13, 2019 (153)
77	A Vietnamese Genetic Variation Database Submission ignored due to conflicting rows: Row 10053491 (NC_000023.10:72297561::AC 10/47) Row 10053492 (NC_000023.10:72297561:AC: 10/48) Row 10053493 (NC_000023.10:72297561:ACACAC: 10/48)...	-	Jul 13, 2019 (153)
78	ALFA	NC_000023.11 - 73077723	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4373406813	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACAC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACAC	(self)
ss4373406812	NC_000023.11:73077722:ACACACAC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACAC	(self)
ss1997232157, ss3020133912, ss5234905518	NC_000023.10:72297561:ACACAC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACAC	(self)
ss4373406811, ss5312865581, ss5504465260, ss5796864726	NC_000023.11:73077722:ACACAC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACAC	(self)
45695387, ss1709755548, ss1709755670, ss1997232161	NC_000023.10:72297561:ACAC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACAC	(self)
ss4373406810, ss5312865582, ss5504465261, ss5796864729	NC_000023.11:73077722:ACAC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACAC	(self)
82812192, ss666780589, ss1554841204, ss3836199035, ss5234905517, ss5981160752	NC_000023.10:72297561:AC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC	(self)
ss1710865505, ss1710865506, ss1997232159	NC_000023.10:72297563:AC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC	(self)
ss3841707149	NC_000023.10:72297565:AC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC	(self)
ss3065265279, ss3823070853, ss4373406809, ss5312865580, ss5504465258, ss5796864725	NC_000023.11:73077722:AC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC	(self)
ss3847230597	NC_000023.11:73077726:AC:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC	(self)
ss3651286441	NC_000023.11:73077743:CA:	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC	(self)
ss478844451	NC_000023.9:72214316::AC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACAC	(self)
ss5234905516	NC_000023.10:72297561::AC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACAC	(self)
ss3064370183, ss4373406805, ss5312865579, ss5504465259, ss5796864724	NC_000023.11:73077722::AC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACAC	(self)
ss5234905519	NC_000023.10:72297561::ACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACAC	(self)
ss4373406806, ss5312865583, ss5504465262, ss5796864727	NC_000023.11:73077722::ACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACAC	(self)
ss5234905520	NC_000023.10:72297561::ACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC	(self)
ss4373406807	NC_000023.11:73077722::ACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC	(self)
690039429, ss4373406808, ss5126433072	NC_000023.11:73077722::ACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACAC	(self)
7796481549	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACAC	NC_000023.11:73077722:ACACACACACAC… NC_000023.11:73077722:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACAC	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs377158860

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs377158860