Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs373178468

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr5:69555237-69555260 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
del(GT)6 / del(GT)5 / del(GT)4 / d…

del(GT)6 / del(GT)5 / del(GT)4 / del(GT)3 / delGTGT / delGT / dupGT / dupGTGT / dup(GT)3 / dup(GT)4 / dup(GT)5

Variation Type
Indel Insertion and Deletion
Frequency
delGT=0.4647 (2511/5404, ALFA)
delGT=0.467 (253/542, NorthernSweden)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
OCLN : 3 Prime UTR Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 5404 GTGTGTGTGTGTGTGTGTGTGTGT=0.5337 GTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGT=0.0013, GTGTGTGTGTGTGTGTGTGTGT=0.4647, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.0004, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 0.312291 0.242481 0.445228 16
European Sub 4578 GTGTGTGTGTGTGTGTGTGTGTGT=0.4506 GTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGT=0.0015, GTGTGTGTGTGTGTGTGTGTGT=0.5474, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.0004, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 0.189474 0.285965 0.524561 5
African Sub 708 GTGTGTGTGTGTGTGTGTGTGTGT=1.000 GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 1.0 0.0 0.0 N/A
African Others Sub 36 GTGTGTGTGTGTGTGTGTGTGTGT=1.00 GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
African American Sub 672 GTGTGTGTGTGTGTGTGTGTGTGT=1.000 GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 1.0 0.0 0.0 N/A
Asian Sub 6 GTGTGTGTGTGTGTGTGTGTGTGT=1.0 GTGTGTGTGTGT=0.0, GTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0 1.0 0.0 0.0 N/A
East Asian Sub 6 GTGTGTGTGTGTGTGTGTGTGTGT=1.0 GTGTGTGTGTGT=0.0, GTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0 1.0 0.0 0.0 N/A
Other Asian Sub 0 GTGTGTGTGTGTGTGTGTGTGTGT=0 GTGTGTGTGTGT=0, GTGTGTGTGTGTGT=0, GTGTGTGTGTGTGTGT=0, GTGTGTGTGTGTGTGTGT=0, GTGTGTGTGTGTGTGTGTGT=0, GTGTGTGTGTGTGTGTGTGTGT=0, GTGTGTGTGTGTGTGTGTGTGTGTGT=0, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0 0 0 0 N/A
Latin American 1 Sub 12 GTGTGTGTGTGTGTGTGTGTGTGT=1.00 GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Latin American 2 Sub 58 GTGTGTGTGTGTGTGTGTGTGTGT=1.00 GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
South Asian Sub 4 GTGTGTGTGTGTGTGTGTGTGTGT=1.0 GTGTGTGTGTGT=0.0, GTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0 1.0 0.0 0.0 N/A
Other Sub 38 GTGTGTGTGTGTGTGTGTGTGTGT=0.87 GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.13, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 0.789474 0.052632 0.157895 1


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 5404 (GT)12=0.5337 del(GT)6=0.0000, del(GT)5=0.0000, del(GT)4=0.0000, del(GT)3=0.0000, delGTGT=0.0013, delGT=0.4647, dupGT=0.0004, dupGTGT=0.0000, dup(GT)3=0.0000, dup(GT)4=0.0000, dup(GT)5=0.0000
Allele Frequency Aggregator European Sub 4578 (GT)12=0.4506 del(GT)6=0.0000, del(GT)5=0.0000, del(GT)4=0.0000, del(GT)3=0.0000, delGTGT=0.0015, delGT=0.5474, dupGT=0.0004, dupGTGT=0.0000, dup(GT)3=0.0000, dup(GT)4=0.0000, dup(GT)5=0.0000
Allele Frequency Aggregator African Sub 708 (GT)12=1.000 del(GT)6=0.000, del(GT)5=0.000, del(GT)4=0.000, del(GT)3=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)3=0.000, dup(GT)4=0.000, dup(GT)5=0.000
Allele Frequency Aggregator Latin American 2 Sub 58 (GT)12=1.00 del(GT)6=0.00, del(GT)5=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00, dup(GT)5=0.00
Allele Frequency Aggregator Other Sub 38 (GT)12=0.87 del(GT)6=0.00, del(GT)5=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.13, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00, dup(GT)5=0.00
Allele Frequency Aggregator Latin American 1 Sub 12 (GT)12=1.00 del(GT)6=0.00, del(GT)5=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00, dup(GT)5=0.00
Allele Frequency Aggregator Asian Sub 6 (GT)12=1.0 del(GT)6=0.0, del(GT)5=0.0, del(GT)4=0.0, del(GT)3=0.0, delGTGT=0.0, delGT=0.0, dupGT=0.0, dupGTGT=0.0, dup(GT)3=0.0, dup(GT)4=0.0, dup(GT)5=0.0
Allele Frequency Aggregator South Asian Sub 4 (GT)12=1.0 del(GT)6=0.0, del(GT)5=0.0, del(GT)4=0.0, del(GT)3=0.0, delGTGT=0.0, delGT=0.0, dupGT=0.0, dupGTGT=0.0, dup(GT)3=0.0, dup(GT)4=0.0, dup(GT)5=0.0
Northern Sweden ACPOP Study-wide 542 (GT)12=0.533 delGT=0.467
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[6]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[7]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[8]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[9]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[10]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[11]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[13]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[14]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[15]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[16]
GRCh38.p14 chr 5 NC_000005.10:g.69555237GT[17]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[6]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[7]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[8]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[9]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[10]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[11]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[13]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[14]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[15]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[16]
GRCh37.p13 chr 5 NC_000005.9:g.68851064GT[17]
OCLN RefSeqGene NG_028291.1:g.67946GT[6]
OCLN RefSeqGene NG_028291.1:g.67946GT[7]
OCLN RefSeqGene NG_028291.1:g.67946GT[8]
OCLN RefSeqGene NG_028291.1:g.67946GT[9]
OCLN RefSeqGene NG_028291.1:g.67946GT[10]
OCLN RefSeqGene NG_028291.1:g.67946GT[11]
OCLN RefSeqGene NG_028291.1:g.67946GT[13]
OCLN RefSeqGene NG_028291.1:g.67946GT[14]
OCLN RefSeqGene NG_028291.1:g.67946GT[15]
OCLN RefSeqGene NG_028291.1:g.67946GT[16]
OCLN RefSeqGene NG_028291.1:g.67946GT[17]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[6]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[7]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[8]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[9]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[10]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[11]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[13]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[14]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[15]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[16]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180GT[17]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[12]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[6]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[7]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[8]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[9]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[10]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[13]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[14]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[15]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[16]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[17]
Gene: OCLN, occludin (plus strand)
Molecule type Change Amino acid[Codon] SO Term
OCLN transcript variant 3 NM_001205255.1:c.*1566_*1…

NM_001205255.1:c.*1566_*1589=

N/A 3 Prime UTR Variant
OCLN transcript variant 2 NM_001205254.2:c.*1566_*1…

NM_001205254.2:c.*1566_*1589=

N/A 3 Prime UTR Variant
OCLN transcript variant 1 NM_002538.4:c.*1566_*1589= N/A 3 Prime UTR Variant
OCLN transcript variant X1 XM_047416593.1:c.*1566_*1…

XM_047416593.1:c.*1566_*1589=

N/A 3 Prime UTR Variant
OCLN transcript variant X2 XM_047416594.1:c.*1566_*1…

XM_047416594.1:c.*1566_*1589=

N/A 3 Prime UTR Variant
OCLN transcript variant X3 XM_017008913.3:c.*1566_*1…

XM_017008913.3:c.*1566_*1589=

N/A 3 Prime UTR Variant
OCLN transcript variant X4 XM_017008914.3:c.*1566_*1…

XM_017008914.3:c.*1566_*1589=

N/A 3 Prime UTR Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (GT)12= del(GT)6 del(GT)5 del(GT)4 del(GT)3 delGTGT delGT dupGT dupGTGT dup(GT)3 dup(GT)4 dup(GT)5
GRCh38.p14 chr 5 NC_000005.10:g.69555237_69555260= NC_000005.10:g.69555237GT[6] NC_000005.10:g.69555237GT[7] NC_000005.10:g.69555237GT[8] NC_000005.10:g.69555237GT[9] NC_000005.10:g.69555237GT[10] NC_000005.10:g.69555237GT[11] NC_000005.10:g.69555237GT[13] NC_000005.10:g.69555237GT[14] NC_000005.10:g.69555237GT[15] NC_000005.10:g.69555237GT[16] NC_000005.10:g.69555237GT[17]
GRCh37.p13 chr 5 NC_000005.9:g.68851064_68851087= NC_000005.9:g.68851064GT[6] NC_000005.9:g.68851064GT[7] NC_000005.9:g.68851064GT[8] NC_000005.9:g.68851064GT[9] NC_000005.9:g.68851064GT[10] NC_000005.9:g.68851064GT[11] NC_000005.9:g.68851064GT[13] NC_000005.9:g.68851064GT[14] NC_000005.9:g.68851064GT[15] NC_000005.9:g.68851064GT[16] NC_000005.9:g.68851064GT[17]
OCLN RefSeqGene NG_028291.1:g.67946_67969= NG_028291.1:g.67946GT[6] NG_028291.1:g.67946GT[7] NG_028291.1:g.67946GT[8] NG_028291.1:g.67946GT[9] NG_028291.1:g.67946GT[10] NG_028291.1:g.67946GT[11] NG_028291.1:g.67946GT[13] NG_028291.1:g.67946GT[14] NG_028291.1:g.67946GT[15] NG_028291.1:g.67946GT[16] NG_028291.1:g.67946GT[17]
OCLN transcript variant 1 NM_002538.4:c.*1566_*1589= NM_002538.4:c.*1566GT[6] NM_002538.4:c.*1566GT[7] NM_002538.4:c.*1566GT[8] NM_002538.4:c.*1566GT[9] NM_002538.4:c.*1566GT[10] NM_002538.4:c.*1566GT[11] NM_002538.4:c.*1566GT[13] NM_002538.4:c.*1566GT[14] NM_002538.4:c.*1566GT[15] NM_002538.4:c.*1566GT[16] NM_002538.4:c.*1566GT[17]
OCLN transcript variant 1 NM_002538.3:c.*1566_*1589= NM_002538.3:c.*1566GT[6] NM_002538.3:c.*1566GT[7] NM_002538.3:c.*1566GT[8] NM_002538.3:c.*1566GT[9] NM_002538.3:c.*1566GT[10] NM_002538.3:c.*1566GT[11] NM_002538.3:c.*1566GT[13] NM_002538.3:c.*1566GT[14] NM_002538.3:c.*1566GT[15] NM_002538.3:c.*1566GT[16] NM_002538.3:c.*1566GT[17]
OCLN transcript variant 2 NM_001205254.2:c.*1566_*1589= NM_001205254.2:c.*1566GT[6] NM_001205254.2:c.*1566GT[7] NM_001205254.2:c.*1566GT[8] NM_001205254.2:c.*1566GT[9] NM_001205254.2:c.*1566GT[10] NM_001205254.2:c.*1566GT[11] NM_001205254.2:c.*1566GT[13] NM_001205254.2:c.*1566GT[14] NM_001205254.2:c.*1566GT[15] NM_001205254.2:c.*1566GT[16] NM_001205254.2:c.*1566GT[17]
OCLN transcript variant 2 NM_001205254.1:c.*1566_*1589= NM_001205254.1:c.*1566GT[6] NM_001205254.1:c.*1566GT[7] NM_001205254.1:c.*1566GT[8] NM_001205254.1:c.*1566GT[9] NM_001205254.1:c.*1566GT[10] NM_001205254.1:c.*1566GT[11] NM_001205254.1:c.*1566GT[13] NM_001205254.1:c.*1566GT[14] NM_001205254.1:c.*1566GT[15] NM_001205254.1:c.*1566GT[16] NM_001205254.1:c.*1566GT[17]
OCLN transcript variant 3 NM_001205255.1:c.*1566_*1589= NM_001205255.1:c.*1566GT[6] NM_001205255.1:c.*1566GT[7] NM_001205255.1:c.*1566GT[8] NM_001205255.1:c.*1566GT[9] NM_001205255.1:c.*1566GT[10] NM_001205255.1:c.*1566GT[11] NM_001205255.1:c.*1566GT[13] NM_001205255.1:c.*1566GT[14] NM_001205255.1:c.*1566GT[15] NM_001205255.1:c.*1566GT[16] NM_001205255.1:c.*1566GT[17]
GRCh38.p14 chr 5 alt locus HSCHR5_2_CTG1_1 NW_003315917.2:g.338180_338203= NW_003315917.2:g.338180GT[6] NW_003315917.2:g.338180GT[7] NW_003315917.2:g.338180GT[8] NW_003315917.2:g.338180GT[9] NW_003315917.2:g.338180GT[10] NW_003315917.2:g.338180GT[11] NW_003315917.2:g.338180GT[13] NW_003315917.2:g.338180GT[14] NW_003315917.2:g.338180GT[15] NW_003315917.2:g.338180GT[16] NW_003315917.2:g.338180GT[17]
GRCh38.p14 chr 5 fix patch HG2405_PATCH NW_025791777.1:g.221953GT[12] NW_025791777.1:g.221953GT[6] NW_025791777.1:g.221953GT[7] NW_025791777.1:g.221953GT[8] NW_025791777.1:g.221953GT[9] NW_025791777.1:g.221953GT[10] NW_025791777.1:g.221953_221974= NW_025791777.1:g.221953GT[13] NW_025791777.1:g.221953GT[14] NW_025791777.1:g.221953GT[15] NW_025791777.1:g.221953GT[16] NW_025791777.1:g.221953GT[17]
OCLN transcript variant X4 XM_017008914.3:c.*1566_*1589= XM_017008914.3:c.*1566GT[6] XM_017008914.3:c.*1566GT[7] XM_017008914.3:c.*1566GT[8] XM_017008914.3:c.*1566GT[9] XM_017008914.3:c.*1566GT[10] XM_017008914.3:c.*1566GT[11] XM_017008914.3:c.*1566GT[13] XM_017008914.3:c.*1566GT[14] XM_017008914.3:c.*1566GT[15] XM_017008914.3:c.*1566GT[16] XM_017008914.3:c.*1566GT[17]
OCLN transcript variant X3 XM_017008913.3:c.*1566_*1589= XM_017008913.3:c.*1566GT[6] XM_017008913.3:c.*1566GT[7] XM_017008913.3:c.*1566GT[8] XM_017008913.3:c.*1566GT[9] XM_017008913.3:c.*1566GT[10] XM_017008913.3:c.*1566GT[11] XM_017008913.3:c.*1566GT[13] XM_017008913.3:c.*1566GT[14] XM_017008913.3:c.*1566GT[15] XM_017008913.3:c.*1566GT[16] XM_017008913.3:c.*1566GT[17]
OCLN transcript variant X1 XM_017008913.1:c.*1566_*1589= XM_017008913.1:c.*1566GT[6] XM_017008913.1:c.*1566GT[7] XM_017008913.1:c.*1566GT[8] XM_017008913.1:c.*1566GT[9] XM_017008913.1:c.*1566GT[10] XM_017008913.1:c.*1566GT[11] XM_017008913.1:c.*1566GT[13] XM_017008913.1:c.*1566GT[14] XM_017008913.1:c.*1566GT[15] XM_017008913.1:c.*1566GT[16] XM_017008913.1:c.*1566GT[17]
OCLN transcript variant X2 XM_047416594.1:c.*1566_*1589= XM_047416594.1:c.*1566GT[6] XM_047416594.1:c.*1566GT[7] XM_047416594.1:c.*1566GT[8] XM_047416594.1:c.*1566GT[9] XM_047416594.1:c.*1566GT[10] XM_047416594.1:c.*1566GT[11] XM_047416594.1:c.*1566GT[13] XM_047416594.1:c.*1566GT[14] XM_047416594.1:c.*1566GT[15] XM_047416594.1:c.*1566GT[16] XM_047416594.1:c.*1566GT[17]
OCLN transcript variant X1 XM_047416593.1:c.*1566_*1589= XM_047416593.1:c.*1566GT[6] XM_047416593.1:c.*1566GT[7] XM_047416593.1:c.*1566GT[8] XM_047416593.1:c.*1566GT[9] XM_047416593.1:c.*1566GT[10] XM_047416593.1:c.*1566GT[11] XM_047416593.1:c.*1566GT[13] XM_047416593.1:c.*1566GT[14] XM_047416593.1:c.*1566GT[15] XM_047416593.1:c.*1566GT[16] XM_047416593.1:c.*1566GT[17]
OCLN transcript variant 4 NM_001410743.1:c.*1566_*1589= NM_001410743.1:c.*1566GT[6] NM_001410743.1:c.*1566GT[7] NM_001410743.1:c.*1566GT[8] NM_001410743.1:c.*1566GT[9] NM_001410743.1:c.*1566GT[10] NM_001410743.1:c.*1566GT[11] NM_001410743.1:c.*1566GT[13] NM_001410743.1:c.*1566GT[14] NM_001410743.1:c.*1566GT[15] NM_001410743.1:c.*1566GT[16] NM_001410743.1:c.*1566GT[17]
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

40 SubSNP, 23 Frequency submissions
No Submitter Submission ID Date (Build)
1 LUNTER ss551664030 Apr 25, 2013 (138)
2 BILGI_BIOE ss666313761 Apr 25, 2013 (138)
3 SWEGEN ss2997095798 Nov 08, 2017 (151)
4 MCHAISSO ss3064160560 Nov 08, 2017 (151)
5 MCHAISSO ss3066022392 Nov 08, 2017 (151)
6 URBANLAB ss3648082688 Oct 12, 2018 (152)
7 ACPOP ss3732443112 Jul 13, 2019 (153)
8 EVA ss3838120290 Apr 26, 2020 (154)
9 EVA ss3843561249 Apr 26, 2020 (154)
10 KOGIC ss3956870661 Apr 26, 2020 (154)
11 KOGIC ss3956870662 Apr 26, 2020 (154)
12 KOGIC ss3956870663 Apr 26, 2020 (154)
13 KOGIC ss3956870664 Apr 26, 2020 (154)
14 GNOMAD ss4106235823 Apr 26, 2021 (155)
15 GNOMAD ss4106235824 Apr 26, 2021 (155)
16 GNOMAD ss4106235825 Apr 26, 2021 (155)
17 GNOMAD ss4106235826 Apr 26, 2021 (155)
18 GNOMAD ss4106235828 Apr 26, 2021 (155)
19 GNOMAD ss4106235829 Apr 26, 2021 (155)
20 GNOMAD ss4106235830 Apr 26, 2021 (155)
21 GNOMAD ss4106235831 Apr 26, 2021 (155)
22 GNOMAD ss4106235832 Apr 26, 2021 (155)
23 TOMMO_GENOMICS ss5172194057 Apr 26, 2021 (155)
24 TOMMO_GENOMICS ss5172194058 Apr 26, 2021 (155)
25 TOMMO_GENOMICS ss5172194059 Apr 26, 2021 (155)
26 TOMMO_GENOMICS ss5172194060 Apr 26, 2021 (155)
27 1000G_HIGH_COVERAGE ss5264325692 Oct 13, 2022 (156)
28 1000G_HIGH_COVERAGE ss5264325693 Oct 13, 2022 (156)
29 1000G_HIGH_COVERAGE ss5264325694 Oct 13, 2022 (156)
30 1000G_HIGH_COVERAGE ss5264325695 Oct 13, 2022 (156)
31 1000G_HIGH_COVERAGE ss5264325696 Oct 13, 2022 (156)
32 1000G_HIGH_COVERAGE ss5264325697 Oct 13, 2022 (156)
33 HUGCELL_USP ss5462469444 Oct 13, 2022 (156)
34 HUGCELL_USP ss5462469445 Oct 13, 2022 (156)
35 TOMMO_GENOMICS ss5708719586 Oct 13, 2022 (156)
36 TOMMO_GENOMICS ss5708719587 Oct 13, 2022 (156)
37 TOMMO_GENOMICS ss5708719588 Oct 13, 2022 (156)
38 TOMMO_GENOMICS ss5708719589 Oct 13, 2022 (156)
39 YY_MCH ss5806405283 Oct 13, 2022 (156)
40 EVA ss5854852776 Oct 13, 2022 (156)
41 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 191618128 (NC_000005.10:69555236::GT 4561/92370)
Row 191618129 (NC_000005.10:69555236::GTGT 90/92372)
Row 191618130 (NC_000005.10:69555236::GTGTGT 1/92370)...

- Apr 26, 2021 (155)
42 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 191618128 (NC_000005.10:69555236::GT 4561/92370)
Row 191618129 (NC_000005.10:69555236::GTGT 90/92372)
Row 191618130 (NC_000005.10:69555236::GTGTGT 1/92370)...

- Apr 26, 2021 (155)
43 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 191618128 (NC_000005.10:69555236::GT 4561/92370)
Row 191618129 (NC_000005.10:69555236::GTGT 90/92372)
Row 191618130 (NC_000005.10:69555236::GTGTGT 1/92370)...

- Apr 26, 2021 (155)
44 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 191618128 (NC_000005.10:69555236::GT 4561/92370)
Row 191618129 (NC_000005.10:69555236::GTGT 90/92372)
Row 191618130 (NC_000005.10:69555236::GTGTGT 1/92370)...

- Apr 26, 2021 (155)
45 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 191618128 (NC_000005.10:69555236::GT 4561/92370)
Row 191618129 (NC_000005.10:69555236::GTGT 90/92372)
Row 191618130 (NC_000005.10:69555236::GTGTGT 1/92370)...

- Apr 26, 2021 (155)
46 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 191618128 (NC_000005.10:69555236::GT 4561/92370)
Row 191618129 (NC_000005.10:69555236::GTGT 90/92372)
Row 191618130 (NC_000005.10:69555236::GTGTGT 1/92370)...

- Apr 26, 2021 (155)
47 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 191618128 (NC_000005.10:69555236::GT 4561/92370)
Row 191618129 (NC_000005.10:69555236::GTGT 90/92372)
Row 191618130 (NC_000005.10:69555236::GTGTGT 1/92370)...

- Apr 26, 2021 (155)
48 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 191618128 (NC_000005.10:69555236::GT 4561/92370)
Row 191618129 (NC_000005.10:69555236::GTGT 90/92372)
Row 191618130 (NC_000005.10:69555236::GTGTGT 1/92370)...

- Apr 26, 2021 (155)
49 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 191618128 (NC_000005.10:69555236::GT 4561/92370)
Row 191618129 (NC_000005.10:69555236::GTGT 90/92372)
Row 191618130 (NC_000005.10:69555236::GTGTGT 1/92370)...

- Apr 26, 2021 (155)
50 Korean Genome Project

Submission ignored due to conflicting rows:
Row 13248662 (NC_000005.10:69555240::GT 5/870)
Row 13248663 (NC_000005.10:69555238:GT: 14/870)
Row 13248664 (NC_000005.10:69555240::GTGT 6/870)...

- Apr 26, 2020 (154)
51 Korean Genome Project

Submission ignored due to conflicting rows:
Row 13248662 (NC_000005.10:69555240::GT 5/870)
Row 13248663 (NC_000005.10:69555238:GT: 14/870)
Row 13248664 (NC_000005.10:69555240::GTGT 6/870)...

- Apr 26, 2020 (154)
52 Korean Genome Project

Submission ignored due to conflicting rows:
Row 13248662 (NC_000005.10:69555240::GT 5/870)
Row 13248663 (NC_000005.10:69555238:GT: 14/870)
Row 13248664 (NC_000005.10:69555240::GTGT 6/870)...

- Apr 26, 2020 (154)
53 Korean Genome Project

Submission ignored due to conflicting rows:
Row 13248662 (NC_000005.10:69555240::GT 5/870)
Row 13248663 (NC_000005.10:69555238:GT: 14/870)
Row 13248664 (NC_000005.10:69555240::GTGT 6/870)...

- Apr 26, 2020 (154)
54 Northern Sweden NC_000005.9 - 68851064 Jul 13, 2019 (153)
55 8.3KJPN

Submission ignored due to conflicting rows:
Row 30163364 (NC_000005.9:68851063:GT: 9567/16582)
Row 30163365 (NC_000005.9:68851063::GT 16/16582)
Row 30163366 (NC_000005.9:68851063::GTGT 6/16582)...

- Apr 26, 2021 (155)
56 8.3KJPN

Submission ignored due to conflicting rows:
Row 30163364 (NC_000005.9:68851063:GT: 9567/16582)
Row 30163365 (NC_000005.9:68851063::GT 16/16582)
Row 30163366 (NC_000005.9:68851063::GTGT 6/16582)...

- Apr 26, 2021 (155)
57 8.3KJPN

Submission ignored due to conflicting rows:
Row 30163364 (NC_000005.9:68851063:GT: 9567/16582)
Row 30163365 (NC_000005.9:68851063::GT 16/16582)
Row 30163366 (NC_000005.9:68851063::GTGT 6/16582)...

- Apr 26, 2021 (155)
58 8.3KJPN

Submission ignored due to conflicting rows:
Row 30163364 (NC_000005.9:68851063:GT: 9567/16582)
Row 30163365 (NC_000005.9:68851063::GT 16/16582)
Row 30163366 (NC_000005.9:68851063::GTGT 6/16582)...

- Apr 26, 2021 (155)
59 14KJPN

Submission ignored due to conflicting rows:
Row 42556690 (NC_000005.10:69555236:GT: 14234/27268)
Row 42556691 (NC_000005.10:69555236::GT 32/27268)
Row 42556692 (NC_000005.10:69555236::GTGT 8/27268)...

- Oct 13, 2022 (156)
60 14KJPN

Submission ignored due to conflicting rows:
Row 42556690 (NC_000005.10:69555236:GT: 14234/27268)
Row 42556691 (NC_000005.10:69555236::GT 32/27268)
Row 42556692 (NC_000005.10:69555236::GTGT 8/27268)...

- Oct 13, 2022 (156)
61 14KJPN

Submission ignored due to conflicting rows:
Row 42556690 (NC_000005.10:69555236:GT: 14234/27268)
Row 42556691 (NC_000005.10:69555236::GT 32/27268)
Row 42556692 (NC_000005.10:69555236::GTGT 8/27268)...

- Oct 13, 2022 (156)
62 14KJPN

Submission ignored due to conflicting rows:
Row 42556690 (NC_000005.10:69555236:GT: 14234/27268)
Row 42556691 (NC_000005.10:69555236::GT 32/27268)
Row 42556692 (NC_000005.10:69555236::GTGT 8/27268)...

- Oct 13, 2022 (156)
63 ALFA NC_000005.10 - 69555237 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss4106235832 NC_000005.10:69555236:GTGTGTGTGTGT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGT

(self)
ss4106235831 NC_000005.10:69555236:GTGTGTGTGT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGT

(self)
ss4106235830, ss5264325697 NC_000005.10:69555236:GTGTGTGT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT

(self)
ss4106235829, ss5264325696 NC_000005.10:69555236:GTGTGT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT

(self)
ss2997095798, ss5172194060 NC_000005.9:68851063:GTGT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGT

(self)
ss3956870664, ss4106235828, ss5264325695, ss5708719589 NC_000005.10:69555236:GTGT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGT

(self)
ss551664030 NC_000005.8:68886819:GT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT

(self)
5727977, ss666313761, ss3732443112, ss3838120290, ss5172194057 NC_000005.9:68851063:GT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT

(self)
ss3064160560, ss3066022392, ss3648082688, ss3843561249, ss5264325692, ss5462469444, ss5708719586, ss5806405283, ss5854852776 NC_000005.10:69555236:GT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT

(self)
ss3956870662 NC_000005.10:69555238:GT: NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT

(self)
ss5172194058 NC_000005.9:68851063::GT NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4106235823, ss5264325693, ss5462469445, ss5708719587 NC_000005.10:69555236::GT NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3956870661 NC_000005.10:69555240::GT NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss5172194059 NC_000005.9:68851063::GTGT NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4106235824, ss5264325694, ss5708719588 NC_000005.10:69555236::GTGT NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3956870663 NC_000005.10:69555240::GTGT NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4106235825 NC_000005.10:69555236::GTGTGT NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4106235826 NC_000005.10:69555236::GTGTGTGTGT NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
1230829168 NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000005.10:69555236:GTGTGTGTGTGT…

NC_000005.10:69555236:GTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs373178468

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d