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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs36182126

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr6:49561027-49561053 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
del(CT)5 / del(CT)4 / del(CT)3 / d…

del(CT)5 / del(CT)4 / del(CT)3 / delCTCT / delCT / dupCT / dupCTCT / dup(CT)3 / dup(CT)4 / dup(CT)5 / dup(CT)6

Variation Type
Indel Insertion and Deletion
Frequency
dupCT=0.3569 (2499/7002, ALFA)
dupCT=0.4718 (2363/5008, 1000G)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
C6orf141 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 7002 TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.6361 TCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCT=0.0009, TCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.3569, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0034, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0027, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000 0.484796 0.200116 0.315088 32
European Sub 6054 TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.5796 TCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCT=0.0010, TCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.4123, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0040, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0031, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000 0.403827 0.231957 0.364216 32
African Sub 744 TCTCTCTCTCTCTCTCTCTCTCTCTCT=1.000 TCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000 1.0 0.0 0.0 N/A
African Others Sub 26 TCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00 TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00 1.0 0.0 0.0 N/A
African American Sub 718 TCTCTCTCTCTCTCTCTCTCTCTCTCT=1.000 TCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000 1.0 0.0 0.0 N/A
Asian Sub 22 TCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00 TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00 1.0 0.0 0.0 N/A
East Asian Sub 16 TCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00 TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00 1.0 0.0 0.0 N/A
Other Asian Sub 6 TCTCTCTCTCTCTCTCTCTCTCTCTCT=1.0 TCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0 1.0 0.0 0.0 N/A
Latin American 1 Sub 14 TCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00 TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00 1.0 0.0 0.0 N/A
Latin American 2 Sub 40 TCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00 TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00 1.0 0.0 0.0 N/A
South Asian Sub 18 TCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00 TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00 1.0 0.0 0.0 N/A
Other Sub 110 TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.973 TCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.027, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000 0.945455 0.0 0.054545 0


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 7002 (TC)13T=0.6361 del(CT)5=0.0000, del(CT)4=0.0000, del(CT)3=0.0009, delCTCT=0.0000, delCT=0.0000, dupCT=0.3569, dupCTCT=0.0027, dup(CT)3=0.0034, dup(CT)4=0.0000, dup(CT)5=0.0000, dup(CT)6=0.0000
Allele Frequency Aggregator European Sub 6054 (TC)13T=0.5796 del(CT)5=0.0000, del(CT)4=0.0000, del(CT)3=0.0010, delCTCT=0.0000, delCT=0.0000, dupCT=0.4123, dupCTCT=0.0031, dup(CT)3=0.0040, dup(CT)4=0.0000, dup(CT)5=0.0000, dup(CT)6=0.0000
Allele Frequency Aggregator African Sub 744 (TC)13T=1.000 del(CT)5=0.000, del(CT)4=0.000, del(CT)3=0.000, delCTCT=0.000, delCT=0.000, dupCT=0.000, dupCTCT=0.000, dup(CT)3=0.000, dup(CT)4=0.000, dup(CT)5=0.000, dup(CT)6=0.000
Allele Frequency Aggregator Other Sub 110 (TC)13T=0.973 del(CT)5=0.000, del(CT)4=0.000, del(CT)3=0.000, delCTCT=0.000, delCT=0.000, dupCT=0.027, dupCTCT=0.000, dup(CT)3=0.000, dup(CT)4=0.000, dup(CT)5=0.000, dup(CT)6=0.000
Allele Frequency Aggregator Latin American 2 Sub 40 (TC)13T=1.00 del(CT)5=0.00, del(CT)4=0.00, del(CT)3=0.00, delCTCT=0.00, delCT=0.00, dupCT=0.00, dupCTCT=0.00, dup(CT)3=0.00, dup(CT)4=0.00, dup(CT)5=0.00, dup(CT)6=0.00
Allele Frequency Aggregator Asian Sub 22 (TC)13T=1.00 del(CT)5=0.00, del(CT)4=0.00, del(CT)3=0.00, delCTCT=0.00, delCT=0.00, dupCT=0.00, dupCTCT=0.00, dup(CT)3=0.00, dup(CT)4=0.00, dup(CT)5=0.00, dup(CT)6=0.00
Allele Frequency Aggregator South Asian Sub 18 (TC)13T=1.00 del(CT)5=0.00, del(CT)4=0.00, del(CT)3=0.00, delCTCT=0.00, delCT=0.00, dupCT=0.00, dupCTCT=0.00, dup(CT)3=0.00, dup(CT)4=0.00, dup(CT)5=0.00, dup(CT)6=0.00
Allele Frequency Aggregator Latin American 1 Sub 14 (TC)13T=1.00 del(CT)5=0.00, del(CT)4=0.00, del(CT)3=0.00, delCTCT=0.00, delCT=0.00, dupCT=0.00, dupCTCT=0.00, dup(CT)3=0.00, dup(CT)4=0.00, dup(CT)5=0.00, dup(CT)6=0.00
1000Genomes Global Study-wide 5008 -

No frequency provided

dupCT=0.4718
1000Genomes African Sub 1322 -

No frequency provided

dupCT=0.3782
1000Genomes East Asian Sub 1008 -

No frequency provided

dupCT=0.5476
1000Genomes Europe Sub 1006 -

No frequency provided

dupCT=0.4841
1000Genomes South Asian Sub 978 -

No frequency provided

dupCT=0.421
1000Genomes American Sub 694 -

No frequency provided

dupCT=0.594
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[8]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[9]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[10]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[11]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[12]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[14]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[15]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[16]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[17]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[18]
GRCh38.p14 chr 6 NC_000006.12:g.49561028CT[19]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[8]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[9]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[10]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[11]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[12]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[14]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[15]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[16]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[17]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[18]
GRCh37.p13 chr 6 NC_000006.11:g.49528741CT[19]
Gene: C6orf141, chromosome 6 open reading frame 141 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
C6orf141 transcript variant 1 NM_001145652.2:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant 3 NR_146854.3:n. N/A Intron Variant
C6orf141 transcript variant 5 NR_146856.3:n. N/A Intron Variant
C6orf141 transcript variant 6 NR_146857.3:n. N/A Intron Variant
C6orf141 transcript variant 8 NR_146859.3:n. N/A Intron Variant
C6orf141 transcript variant 9 NR_146860.3:n. N/A Intron Variant
C6orf141 transcript variant 11 NR_146862.3:n. N/A Intron Variant
C6orf141 transcript variant 13 NR_146864.3:n. N/A Intron Variant
C6orf141 transcript NR_170577.1:n. N/A Intron Variant
C6orf141 transcript NR_170578.1:n. N/A Intron Variant
C6orf141 transcript NR_170579.1:n. N/A Intron Variant
C6orf141 transcript NR_170580.1:n. N/A Intron Variant
C6orf141 transcript NR_170581.1:n. N/A Intron Variant
C6orf141 transcript NR_170582.1:n. N/A Intron Variant
C6orf141 transcript NR_170583.1:n. N/A Intron Variant
C6orf141 transcript NR_170584.1:n. N/A Intron Variant
C6orf141 transcript NR_170585.1:n. N/A Intron Variant
C6orf141 transcript NR_170586.1:n. N/A Intron Variant
C6orf141 transcript NR_170587.1:n. N/A Intron Variant
C6orf141 transcript NR_170588.1:n. N/A Intron Variant
C6orf141 transcript NR_170589.1:n. N/A Intron Variant
C6orf141 transcript NR_170590.1:n. N/A Intron Variant
C6orf141 transcript NR_170591.1:n. N/A Intron Variant
C6orf141 transcript NR_170592.1:n. N/A Intron Variant
C6orf141 transcript NR_170593.1:n. N/A Intron Variant
C6orf141 transcript variant 2 NR_146853.2:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant 4 NR_146855.2:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant 7 NR_146858.2:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant 10 NR_146861.2:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant 12 NR_146863.2:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170563.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170564.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170565.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170566.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170567.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170568.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170569.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170570.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170571.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170572.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170573.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170574.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170575.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript NR_170576.1:n. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X1 XM_005248850.4:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X7 XM_005248853.3:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X2 XM_006714997.3:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X3 XM_047418225.1:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X4 XM_047418226.1:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X9 XM_047418227.1:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X5 XM_047418228.1:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X6 XM_047418229.1:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X8 XM_047418230.1:c. N/A Genic Downstream Transcript Variant
C6orf141 transcript variant X10 XM_047418231.1:c. N/A Genic Downstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (TC)13T= del(CT)5 del(CT)4 del(CT)3 delCTCT delCT dupCT dupCTCT dup(CT)3 dup(CT)4 dup(CT)5 dup(CT)6
GRCh38.p14 chr 6 NC_000006.12:g.49561027_49561053= NC_000006.12:g.49561028CT[8] NC_000006.12:g.49561028CT[9] NC_000006.12:g.49561028CT[10] NC_000006.12:g.49561028CT[11] NC_000006.12:g.49561028CT[12] NC_000006.12:g.49561028CT[14] NC_000006.12:g.49561028CT[15] NC_000006.12:g.49561028CT[16] NC_000006.12:g.49561028CT[17] NC_000006.12:g.49561028CT[18] NC_000006.12:g.49561028CT[19]
GRCh37.p13 chr 6 NC_000006.11:g.49528740_49528766= NC_000006.11:g.49528741CT[8] NC_000006.11:g.49528741CT[9] NC_000006.11:g.49528741CT[10] NC_000006.11:g.49528741CT[11] NC_000006.11:g.49528741CT[12] NC_000006.11:g.49528741CT[14] NC_000006.11:g.49528741CT[15] NC_000006.11:g.49528741CT[16] NC_000006.11:g.49528741CT[17] NC_000006.11:g.49528741CT[18] NC_000006.11:g.49528741CT[19]
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

78 SubSNP, 36 Frequency submissions
No Submitter Submission ID Date (Build)
1 ABI ss42855415 Mar 16, 2006 (126)
2 HGSV ss82950155 Oct 12, 2018 (152)
3 HUMANGENOME_JCVI ss95428164 Feb 05, 2009 (130)
4 GMI ss288722578 May 04, 2012 (137)
5 1000GENOMES ss326802090 May 09, 2011 (135)
6 1000GENOMES ss326849881 May 09, 2011 (135)
7 1000GENOMES ss327097661 May 09, 2011 (135)
8 LUNTER ss551614077 Apr 25, 2013 (138)
9 LUNTER ss551797894 Apr 25, 2013 (138)
10 LUNTER ss553247545 Apr 25, 2013 (138)
11 SSMP ss663700305 Apr 01, 2015 (144)
12 BILGI_BIOE ss666353855 Apr 25, 2013 (138)
13 1000GENOMES ss1375493257 Aug 21, 2014 (142)
14 DDI ss1536503370 Apr 01, 2015 (144)
15 EVA_UK10K_ALSPAC ss1705158652 Jan 10, 2018 (151)
16 EVA_UK10K_TWINSUK ss1705158709 Jan 10, 2018 (151)
17 EVA_UK10K_TWINSUK ss1710269560 Oct 12, 2018 (152)
18 EVA_UK10K_ALSPAC ss1710269616 Oct 12, 2018 (152)
19 SWEGEN ss2999045232 Nov 08, 2017 (151)
20 MCHAISSO ss3064204611 Jan 10, 2018 (151)
21 MCHAISSO ss3065083448 Jan 10, 2018 (151)
22 MCHAISSO ss3066080656 Jan 10, 2018 (151)
23 URBANLAB ss3648348694 Oct 12, 2018 (152)
24 EVA_DECODE ss3717188640 Jul 13, 2019 (153)
25 EVA_DECODE ss3717188641 Jul 13, 2019 (153)
26 EVA_DECODE ss3717188642 Jul 13, 2019 (153)
27 EVA_DECODE ss3717188643 Jul 13, 2019 (153)
28 EVA_DECODE ss3717188644 Jul 13, 2019 (153)
29 ACPOP ss3733495069 Jul 13, 2019 (153)
30 ACPOP ss3733495070 Jul 13, 2019 (153)
31 ACPOP ss3733495071 Jul 13, 2019 (153)
32 PACBIO ss3785471423 Jul 13, 2019 (153)
33 PACBIO ss3790822846 Jul 13, 2019 (153)
34 PACBIO ss3795701516 Jul 13, 2019 (153)
35 KHV_HUMAN_GENOMES ss3808154496 Jul 13, 2019 (153)
36 EVA ss3829917681 Apr 26, 2020 (154)
37 EVA ss3838436694 Apr 26, 2020 (154)
38 EVA ss3843881562 Apr 26, 2020 (154)
39 KOGIC ss3959012613 Apr 26, 2020 (154)
40 KOGIC ss3959012614 Apr 26, 2020 (154)
41 KOGIC ss3959012615 Apr 26, 2020 (154)
42 KOGIC ss3959012616 Apr 26, 2020 (154)
43 KOGIC ss3959012617 Apr 26, 2020 (154)
44 GNOMAD ss4141552871 Apr 26, 2021 (155)
45 GNOMAD ss4141552872 Apr 26, 2021 (155)
46 GNOMAD ss4141552873 Apr 26, 2021 (155)
47 GNOMAD ss4141552874 Apr 26, 2021 (155)
48 GNOMAD ss4141552875 Apr 26, 2021 (155)
49 GNOMAD ss4141552876 Apr 26, 2021 (155)
50 GNOMAD ss4141552877 Apr 26, 2021 (155)
51 GNOMAD ss4141552878 Apr 26, 2021 (155)
52 GNOMAD ss4141552879 Apr 26, 2021 (155)
53 GNOMAD ss4141552880 Apr 26, 2021 (155)
54 TOMMO_GENOMICS ss5177455524 Apr 26, 2021 (155)
55 TOMMO_GENOMICS ss5177455525 Apr 26, 2021 (155)
56 TOMMO_GENOMICS ss5177455526 Apr 26, 2021 (155)
57 TOMMO_GENOMICS ss5177455527 Apr 26, 2021 (155)
58 TOMMO_GENOMICS ss5177455528 Apr 26, 2021 (155)
59 TOMMO_GENOMICS ss5177455529 Apr 26, 2021 (155)
60 1000G_HIGH_COVERAGE ss5268408669 Oct 13, 2022 (156)
61 1000G_HIGH_COVERAGE ss5268408670 Oct 13, 2022 (156)
62 1000G_HIGH_COVERAGE ss5268408671 Oct 13, 2022 (156)
63 1000G_HIGH_COVERAGE ss5268408672 Oct 13, 2022 (156)
64 1000G_HIGH_COVERAGE ss5268408673 Oct 13, 2022 (156)
65 1000G_HIGH_COVERAGE ss5268408674 Oct 13, 2022 (156)
66 HUGCELL_USP ss5466085413 Oct 13, 2022 (156)
67 HUGCELL_USP ss5466085414 Oct 13, 2022 (156)
68 HUGCELL_USP ss5466085415 Oct 13, 2022 (156)
69 HUGCELL_USP ss5466085416 Oct 13, 2022 (156)
70 TOMMO_GENOMICS ss5715487653 Oct 13, 2022 (156)
71 TOMMO_GENOMICS ss5715487654 Oct 13, 2022 (156)
72 TOMMO_GENOMICS ss5715487655 Oct 13, 2022 (156)
73 TOMMO_GENOMICS ss5715487656 Oct 13, 2022 (156)
74 TOMMO_GENOMICS ss5715487657 Oct 13, 2022 (156)
75 TOMMO_GENOMICS ss5715487658 Oct 13, 2022 (156)
76 EVA ss5842227480 Oct 13, 2022 (156)
77 EVA ss5842227481 Oct 13, 2022 (156)
78 EVA ss5855353523 Oct 13, 2022 (156)
79 1000Genomes NC_000006.11 - 49528740 Oct 12, 2018 (152)
80 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 17776489 (NC_000006.11:49528739::TC 1761/3854)
Row 17776490 (NC_000006.11:49528739:TC: 246/3854)

- Oct 12, 2018 (152)
81 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 17776489 (NC_000006.11:49528739::TC 1761/3854)
Row 17776490 (NC_000006.11:49528739:TC: 246/3854)

- Oct 12, 2018 (152)
82 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
83 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
84 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
85 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
86 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
87 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
88 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
89 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
90 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
91 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 224886011 (NC_000006.12:49561026::TC 67405/133494)
Row 224886012 (NC_000006.12:49561026::TCTC 845/133708)
Row 224886013 (NC_000006.12:49561026::TCTCTC 1018/133728)...

- Apr 26, 2021 (155)
92 Korean Genome Project

Submission ignored due to conflicting rows:
Row 15390614 (NC_000006.12:49561032::TC 1003/1832)
Row 15390615 (NC_000006.12:49561030:TC: 40/1832)
Row 15390616 (NC_000006.12:49561032::TCTC 12/1832)...

- Apr 26, 2020 (154)
93 Korean Genome Project

Submission ignored due to conflicting rows:
Row 15390614 (NC_000006.12:49561032::TC 1003/1832)
Row 15390615 (NC_000006.12:49561030:TC: 40/1832)
Row 15390616 (NC_000006.12:49561032::TCTC 12/1832)...

- Apr 26, 2020 (154)
94 Korean Genome Project

Submission ignored due to conflicting rows:
Row 15390614 (NC_000006.12:49561032::TC 1003/1832)
Row 15390615 (NC_000006.12:49561030:TC: 40/1832)
Row 15390616 (NC_000006.12:49561032::TCTC 12/1832)...

- Apr 26, 2020 (154)
95 Korean Genome Project

Submission ignored due to conflicting rows:
Row 15390614 (NC_000006.12:49561032::TC 1003/1832)
Row 15390615 (NC_000006.12:49561030:TC: 40/1832)
Row 15390616 (NC_000006.12:49561032::TCTC 12/1832)...

- Apr 26, 2020 (154)
96 Korean Genome Project

Submission ignored due to conflicting rows:
Row 15390614 (NC_000006.12:49561032::TC 1003/1832)
Row 15390615 (NC_000006.12:49561030:TC: 40/1832)
Row 15390616 (NC_000006.12:49561032::TCTC 12/1832)...

- Apr 26, 2020 (154)
97 Northern Sweden

Submission ignored due to conflicting rows:
Row 6779934 (NC_000006.11:49528739::TC 276/600)
Row 6779935 (NC_000006.11:49528739::TCTCTC 6/600)
Row 6779936 (NC_000006.11:49528739::TCTC 3/600)

- Jul 13, 2019 (153)
98 Northern Sweden

Submission ignored due to conflicting rows:
Row 6779934 (NC_000006.11:49528739::TC 276/600)
Row 6779935 (NC_000006.11:49528739::TCTCTC 6/600)
Row 6779936 (NC_000006.11:49528739::TCTC 3/600)

- Jul 13, 2019 (153)
99 Northern Sweden

Submission ignored due to conflicting rows:
Row 6779934 (NC_000006.11:49528739::TC 276/600)
Row 6779935 (NC_000006.11:49528739::TCTCTC 6/600)
Row 6779936 (NC_000006.11:49528739::TCTC 3/600)

- Jul 13, 2019 (153)
100 8.3KJPN

Submission ignored due to conflicting rows:
Row 35424831 (NC_000006.11:49528739::TC 10601/16760)
Row 35424832 (NC_000006.11:49528739:TC: 63/16760)
Row 35424833 (NC_000006.11:49528739::TCTC 46/16760)...

- Apr 26, 2021 (155)
101 8.3KJPN

Submission ignored due to conflicting rows:
Row 35424831 (NC_000006.11:49528739::TC 10601/16760)
Row 35424832 (NC_000006.11:49528739:TC: 63/16760)
Row 35424833 (NC_000006.11:49528739::TCTC 46/16760)...

- Apr 26, 2021 (155)
102 8.3KJPN

Submission ignored due to conflicting rows:
Row 35424831 (NC_000006.11:49528739::TC 10601/16760)
Row 35424832 (NC_000006.11:49528739:TC: 63/16760)
Row 35424833 (NC_000006.11:49528739::TCTC 46/16760)...

- Apr 26, 2021 (155)
103 8.3KJPN

Submission ignored due to conflicting rows:
Row 35424831 (NC_000006.11:49528739::TC 10601/16760)
Row 35424832 (NC_000006.11:49528739:TC: 63/16760)
Row 35424833 (NC_000006.11:49528739::TCTC 46/16760)...

- Apr 26, 2021 (155)
104 8.3KJPN

Submission ignored due to conflicting rows:
Row 35424831 (NC_000006.11:49528739::TC 10601/16760)
Row 35424832 (NC_000006.11:49528739:TC: 63/16760)
Row 35424833 (NC_000006.11:49528739::TCTC 46/16760)...

- Apr 26, 2021 (155)
105 8.3KJPN

Submission ignored due to conflicting rows:
Row 35424831 (NC_000006.11:49528739::TC 10601/16760)
Row 35424832 (NC_000006.11:49528739:TC: 63/16760)
Row 35424833 (NC_000006.11:49528739::TCTC 46/16760)...

- Apr 26, 2021 (155)
106 14KJPN

Submission ignored due to conflicting rows:
Row 49324757 (NC_000006.12:49561026::TC 17813/28258)
Row 49324758 (NC_000006.12:49561026::TCTC 73/28258)
Row 49324759 (NC_000006.12:49561026:TC: 94/28258)...

- Oct 13, 2022 (156)
107 14KJPN

Submission ignored due to conflicting rows:
Row 49324757 (NC_000006.12:49561026::TC 17813/28258)
Row 49324758 (NC_000006.12:49561026::TCTC 73/28258)
Row 49324759 (NC_000006.12:49561026:TC: 94/28258)...

- Oct 13, 2022 (156)
108 14KJPN

Submission ignored due to conflicting rows:
Row 49324757 (NC_000006.12:49561026::TC 17813/28258)
Row 49324758 (NC_000006.12:49561026::TCTC 73/28258)
Row 49324759 (NC_000006.12:49561026:TC: 94/28258)...

- Oct 13, 2022 (156)
109 14KJPN

Submission ignored due to conflicting rows:
Row 49324757 (NC_000006.12:49561026::TC 17813/28258)
Row 49324758 (NC_000006.12:49561026::TCTC 73/28258)
Row 49324759 (NC_000006.12:49561026:TC: 94/28258)...

- Oct 13, 2022 (156)
110 14KJPN

Submission ignored due to conflicting rows:
Row 49324757 (NC_000006.12:49561026::TC 17813/28258)
Row 49324758 (NC_000006.12:49561026::TCTC 73/28258)
Row 49324759 (NC_000006.12:49561026:TC: 94/28258)...

- Oct 13, 2022 (156)
111 14KJPN

Submission ignored due to conflicting rows:
Row 49324757 (NC_000006.12:49561026::TC 17813/28258)
Row 49324758 (NC_000006.12:49561026::TCTC 73/28258)
Row 49324759 (NC_000006.12:49561026:TC: 94/28258)...

- Oct 13, 2022 (156)
112 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 17776489 (NC_000006.11:49528739::TC 1724/3708)
Row 17776490 (NC_000006.11:49528739:TC: 230/3708)

- Oct 12, 2018 (152)
113 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 17776489 (NC_000006.11:49528739::TC 1724/3708)
Row 17776490 (NC_000006.11:49528739:TC: 230/3708)

- Oct 12, 2018 (152)
114 ALFA NC_000006.12 - 49561027 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs140828140 Sep 17, 2011 (135)
rs904685146 Nov 08, 2017 (151)
rs72035538 May 15, 2013 (138)
rs150710871 May 11, 2012 (137)
rs796094024 Nov 08, 2017 (151)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss4141552880 NC_000006.12:49561026:TCTCTCTCTC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCT

(self)
ss4141552879, ss5268408674 NC_000006.12:49561026:TCTCTCTC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCT

(self)
ss2999045232, ss5177455527 NC_000006.11:49528739:TCTCTC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCT

(self)
ss3959012617, ss4141552878, ss5715487656 NC_000006.12:49561026:TCTCTC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCT

(self)
ss5177455528 NC_000006.11:49528739:TCTC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3717188640, ss4141552877, ss5268408672, ss5715487657 NC_000006.12:49561026:TCTC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCT

(self)
ss1705158652, ss1705158709, ss5177455525, ss5842227481 NC_000006.11:49528739:TC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss4141552876, ss5268408670, ss5466085414, ss5715487655 NC_000006.12:49561026:TC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3717188641 NC_000006.12:49561028:TC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3959012614 NC_000006.12:49561030:TC: NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss326802090, ss326849881, ss327097661, ss551614077, ss551797894, ss553247545 NC_000006.10:49636698::TC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss288722578 NC_000006.10:49636725::CT NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
31876116, ss663700305, ss666353855, ss1375493257, ss1536503370, ss3733495069, ss3785471423, ss3790822846, ss3795701516, ss3829917681, ss3838436694, ss5177455524, ss5842227480 NC_000006.11:49528739::TC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss1710269560, ss1710269616 NC_000006.11:49528741::TC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3064204611, ss3065083448, ss3066080656, ss3808154496, ss3843881562, ss4141552871, ss5268408669, ss5466085413, ss5715487653, ss5855353523 NC_000006.12:49561026::TC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3717188642 NC_000006.12:49561030::TC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3959012613 NC_000006.12:49561032::TC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3648348694 NC_000006.12:49561049::CT NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss42855415 NT_007592.15:49468739::TC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss82950155, ss95428164 NT_007592.15:49468766::CT NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3733495071, ss5177455526 NC_000006.11:49528739::TCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss4141552872, ss5268408671, ss5466085416, ss5715487654 NC_000006.12:49561026::TCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3717188643 NC_000006.12:49561030::TCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3959012615 NC_000006.12:49561032::TCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3733495070, ss5177455529 NC_000006.11:49528739::TCTCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss4141552873, ss5268408673, ss5466085415, ss5715487658 NC_000006.12:49561026::TCTCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3717188644 NC_000006.12:49561030::TCTCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss3959012616 NC_000006.12:49561032::TCTCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss4141552874 NC_000006.12:49561026::TCTCTCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
ss4141552875 NC_000006.12:49561026::TCTCTCTCTCTC NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
8008784405 NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

NC_000006.12:49561026:TCTCTCTCTCTC…

NC_000006.12:49561026:TCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs36182126

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d