Name: rs35915549
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs35915549

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr12:8133501-8133514 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₄ / delTTT / delTT / delT / …
del(T)₄ / delTTT / delTT / delT / dupT / dupTT
Variation Type: Indel Insertion and Deletion
Frequency: (T)₁₄=0.1717 (860/5008, 1000G)
(T)₁₄=0.0659 (254/3854, ALSPAC)
(T)₁₄=0.0639 (237/3708, TWINSUK) (+ 7 more)
del(T)₄=0.000 (0/498, ALFA)
delTTT=0.000 (0/498, ALFA)
delTT=0.000 (0/498, ALFA)
delT=0.000 (0/498, ALFA)
dupT=0.000 (0/498, ALFA)
dupTT=0.000 (0/498, ALFA)
(T)₁₄=0.20 (8/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: CLEC4A : Intron Variant
POU5F1P3 : 500B Downstream Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	498	TTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
European	Sub	280	TTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African	Sub	186	TTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	4	TTTTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
African American	Sub	182	TTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	0	TTTTTTTTTTTTTT=0	TTTTTTTTTT=0, TTTTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
East Asian	Sub	0	TTTTTTTTTTTTTT=0	TTTTTTTTTT=0, TTTTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
Other Asian	Sub	0	TTTTTTTTTTTTTT=0	TTTTTTTTTT=0, TTTTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0	0	0	0	N/A
Latin American 1	Sub	8	TTTTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	10	TTTTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
South Asian	Sub	4	TTTTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Other	Sub	10	TTTTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	(T)₁₄=0.1717	delT=0.8283
1000Genomes	African	Sub	1322	(T)₁₄=0.3101	delT=0.6899
1000Genomes	East Asian	Sub	1008	(T)₁₄=0.0526	delT=0.9474
1000Genomes	Europe	Sub	1006	(T)₁₄=0.1829	delT=0.8171
1000Genomes	South Asian	Sub	978	(T)₁₄=0.125	delT=0.875
1000Genomes	American	Sub	694	(T)₁₄=0.131	delT=0.869
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(T)₁₄=0.0659	delT=0.9341
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(T)₁₄=0.0639	delT=0.9361
Allele Frequency Aggregator	Total	Global	498	(T)₁₄=1.000	del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	European	Sub	280	(T)₁₄=1.000	del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	African	Sub	186	(T)₁₄=1.000	del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Latin American 2	Sub	10	(T)₁₄=1.0	del(T)₄=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0
Allele Frequency Aggregator	Other	Sub	10	(T)₁₄=1.0	del(T)₄=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0
Allele Frequency Aggregator	Latin American 1	Sub	8	(T)₁₄=1.0	del(T)₄=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0
Allele Frequency Aggregator	South Asian	Sub	4	(T)₁₄=1.0	del(T)₄=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0
Allele Frequency Aggregator	Asian	Sub	0	(T)₁₄=0	del(T)₄=0, delTTT=0, delTT=0, delT=0, dupT=0, dupTT=0
The Danish reference pan genome	Danish	Study-wide	40	(T)₁₄=0.20	delT=0.80

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 12	NC_000012.12:g.8133511_8133514del
GRCh38.p14 chr 12	NC_000012.12:g.8133512_8133514del
GRCh38.p14 chr 12	NC_000012.12:g.8133513_8133514del
GRCh38.p14 chr 12	NC_000012.12:g.8133514del
GRCh38.p14 chr 12	NC_000012.12:g.8133514dup
GRCh38.p14 chr 12	NC_000012.12:g.8133513_8133514dup
GRCh37.p13 chr 12	NC_000012.11:g.8286107_8286110del
GRCh37.p13 chr 12	NC_000012.11:g.8286108_8286110del
GRCh37.p13 chr 12	NC_000012.11:g.8286109_8286110del
GRCh37.p13 chr 12	NC_000012.11:g.8286110del
GRCh37.p13 chr 12	NC_000012.11:g.8286110dup
GRCh37.p13 chr 12	NC_000012.11:g.8286109_8286110dup

Gene: CLEC4A, C-type lectin domain family 4 member A (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
CLEC4A transcript variant 1	NM_016184.4:c.299-2074_29… NM_016184.4:c.299-2074_299-2071del	N/A	Intron Variant
CLEC4A transcript variant 3	NM_194447.3:c.182-2074_18… NM_194447.3:c.182-2074_182-2071del	N/A	Intron Variant
CLEC4A transcript variant 4	NM_194448.3:c.83-2074_83-… NM_194448.3:c.83-2074_83-2071del	N/A	Intron Variant
CLEC4A transcript variant 2	NM_194450.3:c.200-2074_20… NM_194450.3:c.200-2074_200-2071del	N/A	Intron Variant
CLEC4A transcript variant X1	XM_011520684.3:c.188-2074… XM_011520684.3:c.188-2074_188-2071del	N/A	Intron Variant
CLEC4A transcript variant X2	XM_017019382.3:c.14-2074_… XM_017019382.3:c.14-2074_14-2071del	N/A	Intron Variant

Gene: POU5F1P3, POU class 5 homeobox 1 pseudogene 3 (minus strand) : 500B Downstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
POU5F1P3 transcript	NR_036440.1:n.	N/A	Downstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₄=	del(T)₄	delTTT	delTT	delT	dupT	dupTT
GRCh38.p14 chr 12	NC_000012.12:g.8133501_8133514=	NC_000012.12:g.8133511_8133514del	NC_000012.12:g.8133512_8133514del	NC_000012.12:g.8133513_8133514del	NC_000012.12:g.8133514del	NC_000012.12:g.8133514dup	NC_000012.12:g.8133513_8133514dup
GRCh37.p13 chr 12	NC_000012.11:g.8286097_8286110=	NC_000012.11:g.8286107_8286110del	NC_000012.11:g.8286108_8286110del	NC_000012.11:g.8286109_8286110del	NC_000012.11:g.8286110del	NC_000012.11:g.8286110dup	NC_000012.11:g.8286109_8286110dup
CLEC4A transcript variant 1	NM_016184.3:c.299-2084=	NM_016184.3:c.299-2074_299-2071del	NM_016184.3:c.299-2073_299-2071del	NM_016184.3:c.299-2072_299-2071del	NM_016184.3:c.299-2071del	NM_016184.3:c.299-2071dup	NM_016184.3:c.299-2072_299-2071dup
CLEC4A transcript variant 1	NM_016184.4:c.299-2084=	NM_016184.4:c.299-2074_299-2071del	NM_016184.4:c.299-2073_299-2071del	NM_016184.4:c.299-2072_299-2071del	NM_016184.4:c.299-2071del	NM_016184.4:c.299-2071dup	NM_016184.4:c.299-2072_299-2071dup
CLEC4A transcript variant 3	NM_194447.2:c.182-2084=	NM_194447.2:c.182-2074_182-2071del	NM_194447.2:c.182-2073_182-2071del	NM_194447.2:c.182-2072_182-2071del	NM_194447.2:c.182-2071del	NM_194447.2:c.182-2071dup	NM_194447.2:c.182-2072_182-2071dup
CLEC4A transcript variant 3	NM_194447.3:c.182-2084=	NM_194447.3:c.182-2074_182-2071del	NM_194447.3:c.182-2073_182-2071del	NM_194447.3:c.182-2072_182-2071del	NM_194447.3:c.182-2071del	NM_194447.3:c.182-2071dup	NM_194447.3:c.182-2072_182-2071dup
CLEC4A transcript variant 4	NM_194448.2:c.83-2084=	NM_194448.2:c.83-2074_83-2071del	NM_194448.2:c.83-2073_83-2071del	NM_194448.2:c.83-2072_83-2071del	NM_194448.2:c.83-2071del	NM_194448.2:c.83-2071dup	NM_194448.2:c.83-2072_83-2071dup
CLEC4A transcript variant 4	NM_194448.3:c.83-2084=	NM_194448.3:c.83-2074_83-2071del	NM_194448.3:c.83-2073_83-2071del	NM_194448.3:c.83-2072_83-2071del	NM_194448.3:c.83-2071del	NM_194448.3:c.83-2071dup	NM_194448.3:c.83-2072_83-2071dup
CLEC4A transcript variant 2	NM_194450.2:c.200-2084=	NM_194450.2:c.200-2074_200-2071del	NM_194450.2:c.200-2073_200-2071del	NM_194450.2:c.200-2072_200-2071del	NM_194450.2:c.200-2071del	NM_194450.2:c.200-2071dup	NM_194450.2:c.200-2072_200-2071dup
CLEC4A transcript variant 2	NM_194450.3:c.200-2084=	NM_194450.3:c.200-2074_200-2071del	NM_194450.3:c.200-2073_200-2071del	NM_194450.3:c.200-2072_200-2071del	NM_194450.3:c.200-2071del	NM_194450.3:c.200-2071dup	NM_194450.3:c.200-2072_200-2071dup
CLEC4A transcript variant X1	XM_011520684.3:c.188-2084=	XM_011520684.3:c.188-2074_188-2071del	XM_011520684.3:c.188-2073_188-2071del	XM_011520684.3:c.188-2072_188-2071del	XM_011520684.3:c.188-2071del	XM_011520684.3:c.188-2071dup	XM_011520684.3:c.188-2072_188-2071dup
CLEC4A transcript variant X2	XM_017019382.3:c.14-2084=	XM_017019382.3:c.14-2074_14-2071del	XM_017019382.3:c.14-2073_14-2071del	XM_017019382.3:c.14-2072_14-2071del	XM_017019382.3:c.14-2071del	XM_017019382.3:c.14-2071dup	XM_017019382.3:c.14-2072_14-2071dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

57 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss40141503	Mar 15, 2006 (126)
2	HGSV	ss83756103	Dec 14, 2007 (129)
3	HUMANGENOME_JCVI	ss97267174	Feb 03, 2009 (130)
4	BUSHMAN	ss193263116	Mar 15, 2016 (147)
5	GMI	ss287886056	May 09, 2011 (134)
6	GMI	ss289109810	May 04, 2012 (138)
7	PJP	ss294734710	May 09, 2011 (134)
8	PJP	ss294734711	May 09, 2011 (138)
9	BILGI_BIOE	ss666557939	Apr 25, 2013 (138)
10	1000GENOMES	ss1388062994	Apr 01, 2015 (144)
11	EVA_GENOME_DK	ss1574452663	Apr 01, 2015 (144)
12	EVA_UK10K_ALSPAC	ss1707349427	Apr 01, 2015 (144)
13	EVA_UK10K_TWINSUK	ss1707349783	Apr 01, 2015 (144)
14	HAMMER_LAB	ss1807108822	Sep 08, 2015 (146)
15	JJLAB	ss2031114664	Sep 14, 2016 (149)
16	SYSTEMSBIOZJU	ss2627995221	Nov 08, 2017 (151)
17	SWEGEN	ss3009164084	Nov 08, 2017 (151)
18	MCHAISSO	ss3065461469	Nov 08, 2017 (151)
19	BIOINF_KMB_FNS_UNIBA	ss3645234250	Oct 12, 2018 (152)
20	URBANLAB	ss3649758207	Oct 12, 2018 (152)
21	EVA_DECODE	ss3693069742	Jul 13, 2019 (153)
22	EVA_DECODE	ss3693069743	Jul 13, 2019 (153)
23	EVA_DECODE	ss3693069744	Jul 13, 2019 (153)
24	ACPOP	ss3738749817	Jul 13, 2019 (153)
25	ACPOP	ss3738749818	Jul 13, 2019 (153)
26	PACBIO	ss3787134418	Jul 13, 2019 (153)
27	PACBIO	ss3792249531	Jul 13, 2019 (153)
28	PACBIO	ss3797132352	Jul 13, 2019 (153)
29	KHV_HUMAN_GENOMES	ss3815428866	Jul 13, 2019 (153)
30	EVA	ss3832962452	Apr 26, 2020 (154)
31	EVA	ss3840045002	Apr 26, 2020 (154)
32	GNOMAD	ss4246592425	Apr 26, 2021 (155)
33	GNOMAD	ss4246592426	Apr 26, 2021 (155)
34	GNOMAD	ss4246592427	Apr 26, 2021 (155)
35	GNOMAD	ss4246592428	Apr 26, 2021 (155)
36	GNOMAD	ss4246592429	Apr 26, 2021 (155)
37	GNOMAD	ss4246592430	Apr 26, 2021 (155)
38	TOMMO_GENOMICS	ss5204961144	Apr 26, 2021 (155)
39	TOMMO_GENOMICS	ss5204961145	Apr 26, 2021 (155)
40	TOMMO_GENOMICS	ss5204961146	Apr 26, 2021 (155)
41	TOMMO_GENOMICS	ss5204961147	Apr 26, 2021 (155)
42	1000G_HIGH_COVERAGE	ss5289727748	Oct 13, 2022 (156)
43	1000G_HIGH_COVERAGE	ss5289727749	Oct 13, 2022 (156)
44	1000G_HIGH_COVERAGE	ss5289727750	Oct 13, 2022 (156)
45	1000G_HIGH_COVERAGE	ss5289727751	Oct 13, 2022 (156)
46	HUGCELL_USP	ss5484628976	Oct 13, 2022 (156)
47	HUGCELL_USP	ss5484628977	Oct 13, 2022 (156)
48	HUGCELL_USP	ss5484628978	Oct 13, 2022 (156)
49	HUGCELL_USP	ss5484628979	Oct 13, 2022 (156)
50	TOMMO_GENOMICS	ss5753724079	Oct 13, 2022 (156)
51	TOMMO_GENOMICS	ss5753724080	Oct 13, 2022 (156)
52	TOMMO_GENOMICS	ss5753724081	Oct 13, 2022 (156)
53	TOMMO_GENOMICS	ss5753724082	Oct 13, 2022 (156)
54	EVA	ss5837556927	Oct 13, 2022 (156)
55	EVA	ss5837556928	Oct 13, 2022 (156)
56	EVA	ss5943893855	Oct 13, 2022 (156)
57	EVA	ss5980719413	Oct 13, 2022 (156)
58	1000Genomes	NC_000012.11 - 8286097	Oct 12, 2018 (152)
59	The Avon Longitudinal Study of Parents and Children	NC_000012.11 - 8286097	Oct 12, 2018 (152)
60	The Danish reference pan genome	NC_000012.11 - 8286097	Apr 26, 2020 (154)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 398642162 (NC_000012.12:8133500::T 665/126860) Row 398642163 (NC_000012.12:8133500::TT 9/126874) Row 398642164 (NC_000012.12:8133500:T: 86690/126768)...	-	Apr 26, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 398642162 (NC_000012.12:8133500::T 665/126860) Row 398642163 (NC_000012.12:8133500::TT 9/126874) Row 398642164 (NC_000012.12:8133500:T: 86690/126768)...	-	Apr 26, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 398642162 (NC_000012.12:8133500::T 665/126860) Row 398642163 (NC_000012.12:8133500::TT 9/126874) Row 398642164 (NC_000012.12:8133500:T: 86690/126768)...	-	Apr 26, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 398642162 (NC_000012.12:8133500::T 665/126860) Row 398642163 (NC_000012.12:8133500::TT 9/126874) Row 398642164 (NC_000012.12:8133500:T: 86690/126768)...	-	Apr 26, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 398642162 (NC_000012.12:8133500::T 665/126860) Row 398642163 (NC_000012.12:8133500::TT 9/126874) Row 398642164 (NC_000012.12:8133500:T: 86690/126768)...	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 398642162 (NC_000012.12:8133500::T 665/126860) Row 398642163 (NC_000012.12:8133500::TT 9/126874) Row 398642164 (NC_000012.12:8133500:T: 86690/126768)...	-	Apr 26, 2021 (155)
67	Northern Sweden Submission ignored due to conflicting rows: Row 12034682 (NC_000012.11:8286096:T: 403/596) Row 12034683 (NC_000012.11:8286096:TT: 3/596)	-	Jul 13, 2019 (153)
68	Northern Sweden Submission ignored due to conflicting rows: Row 12034682 (NC_000012.11:8286096:T: 403/596) Row 12034683 (NC_000012.11:8286096:TT: 3/596)	-	Jul 13, 2019 (153)
69	8.3KJPN Submission ignored due to conflicting rows: Row 62930451 (NC_000012.11:8286096:T: 14114/16756) Row 62930452 (NC_000012.11:8286096:TT: 2003/16756) Row 62930453 (NC_000012.11:8286096:TTT: 13/16756)...	-	Apr 26, 2021 (155)
70	8.3KJPN Submission ignored due to conflicting rows: Row 62930451 (NC_000012.11:8286096:T: 14114/16756) Row 62930452 (NC_000012.11:8286096:TT: 2003/16756) Row 62930453 (NC_000012.11:8286096:TTT: 13/16756)...	-	Apr 26, 2021 (155)
71	8.3KJPN Submission ignored due to conflicting rows: Row 62930451 (NC_000012.11:8286096:T: 14114/16756) Row 62930452 (NC_000012.11:8286096:TT: 2003/16756) Row 62930453 (NC_000012.11:8286096:TTT: 13/16756)...	-	Apr 26, 2021 (155)
72	8.3KJPN Submission ignored due to conflicting rows: Row 62930451 (NC_000012.11:8286096:T: 14114/16756) Row 62930452 (NC_000012.11:8286096:TT: 2003/16756) Row 62930453 (NC_000012.11:8286096:TTT: 13/16756)...	-	Apr 26, 2021 (155)
73	14KJPN Submission ignored due to conflicting rows: Row 87561183 (NC_000012.12:8133500:T: 23804/28246) Row 87561184 (NC_000012.12:8133500:TT: 3389/28246) Row 87561185 (NC_000012.12:8133500:TTT: 14/28246)...	-	Oct 13, 2022 (156)
74	14KJPN Submission ignored due to conflicting rows: Row 87561183 (NC_000012.12:8133500:T: 23804/28246) Row 87561184 (NC_000012.12:8133500:TT: 3389/28246) Row 87561185 (NC_000012.12:8133500:TTT: 14/28246)...	-	Oct 13, 2022 (156)
75	14KJPN Submission ignored due to conflicting rows: Row 87561183 (NC_000012.12:8133500:T: 23804/28246) Row 87561184 (NC_000012.12:8133500:TT: 3389/28246) Row 87561185 (NC_000012.12:8133500:TTT: 14/28246)...	-	Oct 13, 2022 (156)
76	14KJPN Submission ignored due to conflicting rows: Row 87561183 (NC_000012.12:8133500:T: 23804/28246) Row 87561184 (NC_000012.12:8133500:TT: 3389/28246) Row 87561185 (NC_000012.12:8133500:TTT: 14/28246)...	-	Oct 13, 2022 (156)
77	UK 10K study - Twins	NC_000012.11 - 8286097	Oct 12, 2018 (152)
78	ALFA	NC_000012.12 - 8133501	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs112533306	Oct 13, 2011 (136)
rs150895984	May 13, 2013 (138)
rs199763929	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4246592430	NC_000012.12:8133500:TTTT:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTT	(self)
5094219766	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTT	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTT	(self)
ss1807108822, ss3009164084, ss5204961146	NC_000012.11:8286096:TTT:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss4246592429, ss5289727750, ss5484628978, ss5753724081	NC_000012.12:8133500:TTT:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
5094219766	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTT	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss83756103	NC_000012.9:8177375:TT:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3738749818, ss5204961145, ss5837556928	NC_000012.11:8286096:TT:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3065461469, ss3693069742, ss4246592428, ss5289727749, ss5484628976, ss5753724080	NC_000012.12:8133500:TT:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
5094219766	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss193263116	NT_009714.17:1046220:TT:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss289109810, ss294734710	NC_000012.10:8177363:T:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss294734711	NC_000012.10:8177376:T:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
56529962, 31393545, 334666, 31393545, ss666557939, ss1388062994, ss1574452663, ss1707349427, ss1707349783, ss2031114664, ss2627995221, ss3738749817, ss3787134418, ss3792249531, ss3797132352, ss3832962452, ss3840045002, ss5204961144, ss5837556927, ss5943893855, ss5980719413	NC_000012.11:8286096:T:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss3645234250, ss3649758207, ss3815428866, ss4246592427, ss5289727748, ss5484628977, ss5753724079	NC_000012.12:8133500:T:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
5094219766	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss3693069743	NC_000012.12:8133501:T:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss40141503, ss97267174, ss287886056	NT_009714.17:1046220:T:	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss5204961147	NC_000012.11:8286096::T	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4246592425, ss5289727751, ss5484628979, ss5753724082	NC_000012.12:8133500::T	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
5094219766	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3693069744	NC_000012.12:8133502::T	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4246592426	NC_000012.12:8133500::TT	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
5094219766	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000012.12:8133500:TTTTTTTTTTTTT… NC_000012.12:8133500:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs35915549

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs35915549