Name: rs35823658
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs35823658

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr8:12739342-12739359 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₁₀ / del(A)₄ / delAAA / delA…
del(A)₁₀ / del(A)₄ / delAAA / delAA / delA / dupA / dupAA / dupAAA / dup(A)₄ / dup(A)₅ / dup(A)₆ / ins(A)₂₇
Variation Type: Indel Insertion and Deletion
Frequency: del(A)₁₀=0.000 (0/174, ALFA)
delAAA=0.000 (0/174, ALFA)
delAA=0.000 (0/174, ALFA) (+ 3 more)
delA=0.000 (0/174, ALFA)
dupA=0.000 (0/174, ALFA)
dupAA=0.000 (0/174, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LONRF1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	174	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
European	Sub	30	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
African	Sub	134	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
African Others	Sub	2	AAAAAAAAAAAAAAAAAA=1.0	AAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
African American	Sub	132	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
Asian	Sub	0	AAAAAAAAAAAAAAAAAA=0	AAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0	0	0	0	N/A
East Asian	Sub	0	AAAAAAAAAAAAAAAAAA=0	AAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Other Asian	Sub	0	AAAAAAAAAAAAAAAAAA=0	AAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Latin American 1	Sub	2	AAAAAAAAAAAAAAAAAA=1.0	AAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	4	AAAAAAAAAAAAAAAAAA=1.0	AAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
South Asian	Sub	0	AAAAAAAAAAAAAAAAAA=0	AAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Other	Sub	4	AAAAAAAAAAAAAAAAAA=1.0	AAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	174	(A)₁₈=1.000	del(A)₁₀=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	African	Sub	134	(A)₁₈=1.000	del(A)₁₀=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	European	Sub	30	(A)₁₈=1.00	del(A)₁₀=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Latin American 2	Sub	4	(A)₁₈=1.0	del(A)₁₀=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0
Allele Frequency Aggregator	Other	Sub	4	(A)₁₈=1.0	del(A)₁₀=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0
Allele Frequency Aggregator	Latin American 1	Sub	2	(A)₁₈=1.0	del(A)₁₀=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0
Allele Frequency Aggregator	South Asian	Sub	0	(A)₁₈=0	del(A)₁₀=0, delAAA=0, delAA=0, delA=0, dupA=0, dupAA=0
Allele Frequency Aggregator	Asian	Sub	0	(A)₁₈=0	del(A)₁₀=0, delAAA=0, delAA=0, delA=0, dupA=0, dupAA=0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 8	NC_000008.11:g.12739350_12739359del
GRCh38.p14 chr 8	NC_000008.11:g.12739356_12739359del
GRCh38.p14 chr 8	NC_000008.11:g.12739357_12739359del
GRCh38.p14 chr 8	NC_000008.11:g.12739358_12739359del
GRCh38.p14 chr 8	NC_000008.11:g.12739359del
GRCh38.p14 chr 8	NC_000008.11:g.12739359dup
GRCh38.p14 chr 8	NC_000008.11:g.12739358_12739359dup
GRCh38.p14 chr 8	NC_000008.11:g.12739357_12739359dup
GRCh38.p14 chr 8	NC_000008.11:g.12739356_12739359dup
GRCh38.p14 chr 8	NC_000008.11:g.12739355_12739359dup
GRCh38.p14 chr 8	NC_000008.11:g.12739354_12739359dup
GRCh38.p14 chr 8	NC_000008.11:g.12739359_12739360insAAAAAAAAAAAAAAAAAAAAAAAAAAA
GRCh37.p13 chr 8	NC_000008.10:g.12596859_12596868del
GRCh37.p13 chr 8	NC_000008.10:g.12596865_12596868del
GRCh37.p13 chr 8	NC_000008.10:g.12596866_12596868del
GRCh37.p13 chr 8	NC_000008.10:g.12596867_12596868del
GRCh37.p13 chr 8	NC_000008.10:g.12596868del
GRCh37.p13 chr 8	NC_000008.10:g.12596868dup
GRCh37.p13 chr 8	NC_000008.10:g.12596867_12596868dup
GRCh37.p13 chr 8	NC_000008.10:g.12596866_12596868dup
GRCh37.p13 chr 8	NC_000008.10:g.12596865_12596868dup
GRCh37.p13 chr 8	NC_000008.10:g.12596864_12596868dup
GRCh37.p13 chr 8	NC_000008.10:g.12596863_12596868dup
GRCh37.p13 chr 8	NC_000008.10:g.12596868_12596869insAAAAAAAAAAAAAAAAAAAAAAAAAAA
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934700_5934709del
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934706_5934709del
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934707_5934709del
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934708_5934709del
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934709del
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934709dup
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934708_5934709dup
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934707_5934709dup
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934706_5934709dup
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934705_5934709dup
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934704_5934709dup
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934709_5934710insAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gene: LONRF1, LON peptidase N-terminal domain and ring finger 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LONRF1 transcript variant 2	NM_001329976.2:c.964-1207… NM_001329976.2:c.964-1207_964-1198del	N/A	Intron Variant
LONRF1 transcript variant 1	NM_152271.5:c.964-1207_96… NM_152271.5:c.964-1207_964-1198del	N/A	Intron Variant
LONRF1 transcript variant 3	NR_138255.2:n.	N/A	Intron Variant
LONRF1 transcript variant 4	NR_138256.2:n.	N/A	Intron Variant
LONRF1 transcript variant X1	XM_011544694.4:c.271-1207… XM_011544694.4:c.271-1207_271-1198del	N/A	Intron Variant
LONRF1 transcript variant X2	XM_047422414.1:c.271-1207… XM_047422414.1:c.271-1207_271-1198del	N/A	Intron Variant
LONRF1 transcript variant X3	XM_047422415.1:c.964-1207… XM_047422415.1:c.964-1207_964-1198del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₈=	del(A)₁₀	del(A)₄	delAAA	delAA	delA	dupA	dupAA	dupAAA	dup(A)₄	dup(A)₅	dup(A)₆	ins(A)₂₇
GRCh38.p14 chr 8	NC_000008.11:g.12739342_12739359=	NC_000008.11:g.12739350_12739359del	NC_000008.11:g.12739356_12739359del	NC_000008.11:g.12739357_12739359del	NC_000008.11:g.12739358_12739359del	NC_000008.11:g.12739359del	NC_000008.11:g.12739359dup	NC_000008.11:g.12739358_12739359dup	NC_000008.11:g.12739357_12739359dup	NC_000008.11:g.12739356_12739359dup	NC_000008.11:g.12739355_12739359dup	NC_000008.11:g.12739354_12739359dup	NC_000008.11:g.12739359_12739360insAAAAAAAAAAAAAAAAAAAAAAAAAAA
GRCh37.p13 chr 8	NC_000008.10:g.12596851_12596868=	NC_000008.10:g.12596859_12596868del	NC_000008.10:g.12596865_12596868del	NC_000008.10:g.12596866_12596868del	NC_000008.10:g.12596867_12596868del	NC_000008.10:g.12596868del	NC_000008.10:g.12596868dup	NC_000008.10:g.12596867_12596868dup	NC_000008.10:g.12596866_12596868dup	NC_000008.10:g.12596865_12596868dup	NC_000008.10:g.12596864_12596868dup	NC_000008.10:g.12596863_12596868dup	NC_000008.10:g.12596868_12596869insAAAAAAAAAAAAAAAAAAAAAAAAAAA
GRCh38.p14 chr 8 fix patch HG76_PATCH	NW_018654717.1:g.5934692_5934709=	NW_018654717.1:g.5934700_5934709del	NW_018654717.1:g.5934706_5934709del	NW_018654717.1:g.5934707_5934709del	NW_018654717.1:g.5934708_5934709del	NW_018654717.1:g.5934709del	NW_018654717.1:g.5934709dup	NW_018654717.1:g.5934708_5934709dup	NW_018654717.1:g.5934707_5934709dup	NW_018654717.1:g.5934706_5934709dup	NW_018654717.1:g.5934705_5934709dup	NW_018654717.1:g.5934704_5934709dup	NW_018654717.1:g.5934709_5934710insAAAAAAAAAAAAAAAAAAAAAAAAAAA
LONRF1 transcript variant 2	NM_001329976.2:c.964-1198=	NM_001329976.2:c.964-1207_964-1198del	NM_001329976.2:c.964-1201_964-1198del	NM_001329976.2:c.964-1200_964-1198del	NM_001329976.2:c.964-1199_964-1198del	NM_001329976.2:c.964-1198del	NM_001329976.2:c.964-1198dup	NM_001329976.2:c.964-1199_964-1198dup	NM_001329976.2:c.964-1200_964-1198dup	NM_001329976.2:c.964-1201_964-1198dup	NM_001329976.2:c.964-1202_964-1198dup	NM_001329976.2:c.964-1203_964-1198dup	NM_001329976.2:c.964-1198_964-1197insTTTTTTTTTTTTTTTTTTTTTTTTTTT
LONRF1 transcript	NM_152271.3:c.964-1198=	NM_152271.3:c.964-1207_964-1198del	NM_152271.3:c.964-1201_964-1198del	NM_152271.3:c.964-1200_964-1198del	NM_152271.3:c.964-1199_964-1198del	NM_152271.3:c.964-1198del	NM_152271.3:c.964-1198dup	NM_152271.3:c.964-1199_964-1198dup	NM_152271.3:c.964-1200_964-1198dup	NM_152271.3:c.964-1201_964-1198dup	NM_152271.3:c.964-1202_964-1198dup	NM_152271.3:c.964-1203_964-1198dup	NM_152271.3:c.964-1198_964-1197insTTTTTTTTTTTTTTTTTTTTTTTTTTT
LONRF1 transcript variant 1	NM_152271.5:c.964-1198=	NM_152271.5:c.964-1207_964-1198del	NM_152271.5:c.964-1201_964-1198del	NM_152271.5:c.964-1200_964-1198del	NM_152271.5:c.964-1199_964-1198del	NM_152271.5:c.964-1198del	NM_152271.5:c.964-1198dup	NM_152271.5:c.964-1199_964-1198dup	NM_152271.5:c.964-1200_964-1198dup	NM_152271.5:c.964-1201_964-1198dup	NM_152271.5:c.964-1202_964-1198dup	NM_152271.5:c.964-1203_964-1198dup	NM_152271.5:c.964-1198_964-1197insTTTTTTTTTTTTTTTTTTTTTTTTTTT
LONRF1 transcript variant X1	XM_005273685.1:c.964-1198=	XM_005273685.1:c.964-1207_964-1198del	XM_005273685.1:c.964-1201_964-1198del	XM_005273685.1:c.964-1200_964-1198del	XM_005273685.1:c.964-1199_964-1198del	XM_005273685.1:c.964-1198del	XM_005273685.1:c.964-1198dup	XM_005273685.1:c.964-1199_964-1198dup	XM_005273685.1:c.964-1200_964-1198dup	XM_005273685.1:c.964-1201_964-1198dup	XM_005273685.1:c.964-1202_964-1198dup	XM_005273685.1:c.964-1203_964-1198dup	XM_005273685.1:c.964-1198_964-1197insTTTTTTTTTTTTTTTTTTTTTTTTTTT
LONRF1 transcript variant X1	XM_011544694.4:c.271-1198=	XM_011544694.4:c.271-1207_271-1198del	XM_011544694.4:c.271-1201_271-1198del	XM_011544694.4:c.271-1200_271-1198del	XM_011544694.4:c.271-1199_271-1198del	XM_011544694.4:c.271-1198del	XM_011544694.4:c.271-1198dup	XM_011544694.4:c.271-1199_271-1198dup	XM_011544694.4:c.271-1200_271-1198dup	XM_011544694.4:c.271-1201_271-1198dup	XM_011544694.4:c.271-1202_271-1198dup	XM_011544694.4:c.271-1203_271-1198dup	XM_011544694.4:c.271-1198_271-1197insTTTTTTTTTTTTTTTTTTTTTTTTTTT
LONRF1 transcript variant X2	XM_047422414.1:c.271-1198=	XM_047422414.1:c.271-1207_271-1198del	XM_047422414.1:c.271-1201_271-1198del	XM_047422414.1:c.271-1200_271-1198del	XM_047422414.1:c.271-1199_271-1198del	XM_047422414.1:c.271-1198del	XM_047422414.1:c.271-1198dup	XM_047422414.1:c.271-1199_271-1198dup	XM_047422414.1:c.271-1200_271-1198dup	XM_047422414.1:c.271-1201_271-1198dup	XM_047422414.1:c.271-1202_271-1198dup	XM_047422414.1:c.271-1203_271-1198dup	XM_047422414.1:c.271-1198_271-1197insTTTTTTTTTTTTTTTTTTTTTTTTTTT
LONRF1 transcript variant X3	XM_047422415.1:c.964-1198=	XM_047422415.1:c.964-1207_964-1198del	XM_047422415.1:c.964-1201_964-1198del	XM_047422415.1:c.964-1200_964-1198del	XM_047422415.1:c.964-1199_964-1198del	XM_047422415.1:c.964-1198del	XM_047422415.1:c.964-1198dup	XM_047422415.1:c.964-1199_964-1198dup	XM_047422415.1:c.964-1200_964-1198dup	XM_047422415.1:c.964-1201_964-1198dup	XM_047422415.1:c.964-1202_964-1198dup	XM_047422415.1:c.964-1203_964-1198dup	XM_047422415.1:c.964-1198_964-1197insTTTTTTTTTTTTTTTTTTTTTTTTTTT

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

49 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss81678906	Sep 08, 2015 (146)
2	HUMANGENOME_JCVI	ss95484466	Feb 03, 2009 (137)
3	GMI	ss288891800	May 04, 2012 (137)
4	PJP	ss295369421	May 09, 2011 (137)
5	PJP	ss295369422	May 09, 2011 (137)
6	SSMP	ss663827124	Apr 01, 2015 (144)
7	EVA_UK10K_ALSPAC	ss1705948459	Apr 01, 2015 (144)
8	EVA_UK10K_TWINSUK	ss1705948595	Apr 01, 2015 (144)
9	EVA_UK10K_TWINSUK	ss1710367510	Apr 01, 2015 (144)
10	EVA_UK10K_TWINSUK	ss1710367512	Apr 01, 2015 (144)
11	EVA_UK10K_ALSPAC	ss1710367676	Apr 01, 2015 (144)
12	EVA_UK10K_ALSPAC	ss1710367677	Apr 01, 2015 (144)
13	SWEGEN	ss3002680082	Nov 08, 2017 (151)
14	MCHAISSO	ss3065174588	Nov 08, 2017 (151)
15	MCHAISSO	ss3066188189	Nov 08, 2017 (151)
16	URBANLAB	ss3648849425	Oct 12, 2018 (152)
17	EVA_DECODE	ss3721407349	Jul 13, 2019 (153)
18	EVA_DECODE	ss3721407350	Jul 13, 2019 (153)
19	EVA_DECODE	ss3721407351	Jul 13, 2019 (153)
20	EVA_DECODE	ss3721407352	Jul 13, 2019 (153)
21	EVA_DECODE	ss3721407353	Jul 13, 2019 (153)
22	PACBIO	ss3786063973	Jul 13, 2019 (153)
23	PACBIO	ss3786063974	Jul 13, 2019 (153)
24	PACBIO	ss3791332179	Jul 13, 2019 (153)
25	PACBIO	ss3796213264	Jul 13, 2019 (153)
26	EVA	ss3831010540	Apr 26, 2020 (154)
27	GNOMAD	ss4179131186	Apr 26, 2021 (155)
28	GNOMAD	ss4179131187	Apr 26, 2021 (155)
29	GNOMAD	ss4179131188	Apr 26, 2021 (155)
30	GNOMAD	ss4179131189	Apr 26, 2021 (155)
31	GNOMAD	ss4179131190	Apr 26, 2021 (155)
32	GNOMAD	ss4179131191	Apr 26, 2021 (155)
33	GNOMAD	ss4179131192	Apr 26, 2021 (155)
34	GNOMAD	ss4179131193	Apr 26, 2021 (155)
35	GNOMAD	ss4179131194	Apr 26, 2021 (155)
36	GNOMAD	ss4179131195	Apr 26, 2021 (155)
37	GNOMAD	ss4179131196	Apr 26, 2021 (155)
38	GNOMAD	ss4179131197	Apr 26, 2021 (155)
39	TOMMO_GENOMICS	ss5187329393	Apr 26, 2021 (155)
40	TOMMO_GENOMICS	ss5187329394	Apr 26, 2021 (155)
41	1000G_HIGH_COVERAGE	ss5276065022	Oct 13, 2022 (156)
42	1000G_HIGH_COVERAGE	ss5276065023	Oct 13, 2022 (156)
43	1000G_HIGH_COVERAGE	ss5276065024	Oct 13, 2022 (156)
44	1000G_HIGH_COVERAGE	ss5276065025	Oct 13, 2022 (156)
45	HUGCELL_USP	ss5472738787	Oct 13, 2022 (156)
46	HUGCELL_USP	ss5472738788	Oct 13, 2022 (156)
47	TOMMO_GENOMICS	ss5728859617	Oct 13, 2022 (156)
48	TOMMO_GENOMICS	ss5728859618	Oct 13, 2022 (156)
49	YY_MCH	ss5809447069	Oct 13, 2022 (156)
50	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 22618829 (NC_000008.10:12596851:A: 1007/3854) Row 22618830 (NC_000008.10:12596850:AAA: 201/3854)	-	Oct 12, 2018 (152)
51	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 22618829 (NC_000008.10:12596851:A: 1007/3854) Row 22618830 (NC_000008.10:12596850:AAA: 201/3854)	-	Oct 12, 2018 (152)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
58	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 287100246 (NC_000008.11:12739341::A 202/97364) Row 287100247 (NC_000008.11:12739341::AA 0/97390) Row 287100248 (NC_000008.11:12739341::AAA 3/97378)...	-	Apr 26, 2021 (155)
64	8.3KJPN Submission ignored due to conflicting rows: Row 45298700 (NC_000008.10:12596850:A: 14521/16744) Row 45298701 (NC_000008.10:12596850:AA: 16/16744)	-	Apr 26, 2021 (155)
65	8.3KJPN Submission ignored due to conflicting rows: Row 45298700 (NC_000008.10:12596850:A: 14521/16744) Row 45298701 (NC_000008.10:12596850:AA: 16/16744)	-	Apr 26, 2021 (155)
66	14KJPN Submission ignored due to conflicting rows: Row 62696721 (NC_000008.11:12739341:A: 25469/27968) Row 62696722 (NC_000008.11:12739341:AA: 22/27968)	-	Oct 13, 2022 (156)
67	14KJPN Submission ignored due to conflicting rows: Row 62696721 (NC_000008.11:12739341:A: 25469/27968) Row 62696722 (NC_000008.11:12739341:AA: 22/27968)	-	Oct 13, 2022 (156)
68	UK 10K study - Twins Submission ignored due to conflicting rows: Row 22618828 (NC_000008.10:12596852:A: 2518/3708) Row 22618829 (NC_000008.10:12596851:AA: 963/3708) Row 22618830 (NC_000008.10:12596850:AAA: 216/3708)	-	Apr 26, 2020 (154)
69	UK 10K study - Twins Submission ignored due to conflicting rows: Row 22618829 (NC_000008.10:12596851:A: 963/3708) Row 22618830 (NC_000008.10:12596850:AAA: 216/3708)	-	Oct 12, 2018 (152)
70	UK 10K study - Twins Submission ignored due to conflicting rows: Row 22618829 (NC_000008.10:12596851:A: 963/3708) Row 22618830 (NC_000008.10:12596850:AAA: 216/3708)	-	Oct 12, 2018 (152)
71	ALFA	NC_000008.11 - 12739342	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57013849	May 11, 2012 (137)
rs140578070	May 11, 2012 (137)
rs372244753	May 13, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4179131197	NC_000008.11:12739341:AAAAAAAAAA:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAA	(self)
2087414241	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAA	(self)
ss4179131196	NC_000008.11:12739341:AAAA:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss1705948459, ss1705948595	NC_000008.10:12596850:AAA:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3721407353, ss4179131195	NC_000008.11:12739341:AAA:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
2087414241	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3002680082, ss3786063974, ss5187329394	NC_000008.10:12596850:AA:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss1710367512, ss1710367677	NC_000008.10:12596851:AA:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss4179131194, ss5276065024, ss5472738787, ss5728859618	NC_000008.11:12739341:AA:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
2087414241	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3721407352	NC_000008.11:12739342:AA:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss288891800, ss295369421	NC_000008.9:12641221:A:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss81678906, ss295369422	NC_000008.9:12641238:A:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss663827124, ss3786063973, ss3791332179, ss3796213264, ss3831010540, ss5187329393	NC_000008.10:12596850:A:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
	NC_000008.10:12596851:A:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss1710367510, ss1710367676	NC_000008.10:12596852:A:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3065174588, ss3066188189, ss3648849425, ss4179131193, ss5276065022, ss5472738788, ss5728859617, ss5809447069	NC_000008.11:12739341:A:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
2087414241	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3721407351	NC_000008.11:12739343:A:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss95484466	NT_167187.1:455013:A:	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss4179131186, ss5276065023	NC_000008.11:12739341::A	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
2087414241	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss3721407350	NC_000008.11:12739344::A	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss4179131187, ss5276065025	NC_000008.11:12739341::AA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
2087414241	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss4179131188	NC_000008.11:12739341::AAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA	(self)
ss4179131189	NC_000008.11:12739341::AAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA	(self)
ss3721407349	NC_000008.11:12739344::AAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA	(self)
ss4179131190	NC_000008.11:12739341::AAAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4179131191	NC_000008.11:12739341::AAAAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4179131192	NC_000008.11:12739341::AAAAAAAAAAA… NC_000008.11:12739341::AAAAAAAAAAAAAAAAAAAAAAAAAAA	NC_000008.11:12739341:AAAAAAAAAAAA… NC_000008.11:12739341:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs35823658

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs35823658