Name: rs35819954
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs35819954

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr20:58317557-58317576 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₁₃ / del(T)₁₂ / del(T)₁₀ / d…
del(T)₁₃ / del(T)₁₂ / del(T)₁₀ / del(T)₉ / del(T)₇ / del(T)₅ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₅ / dup(T)₆
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.03652 (459/12570, ALFA)
delT=0.095 (57/600, NorthernSweden)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: RAB22A : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	12570	TTTTTTTTTTTTTTTTTTTT=0.96237	TTTTTTT=0.00000, TTTTTTTT=0.00000, TTTTTTTTTT=0.00000, TTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTT=0.03652, TTTTTTTTTTTTTTTTTTTTT=0.00111, TTTTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTTTT=0.00000	0.930952	0.003827	0.065221	17
European	Sub	9446	TTTTTTTTTTTTTTTTTTTT=0.9500	TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0485, TTTTTTTTTTTTTTTTTTTTT=0.0015, TTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTT=0.0000	0.908261	0.005097	0.086643	10
African	Sub	1994	TTTTTTTTTTTTTTTTTTTT=1.0000	TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	80	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	1914	TTTTTTTTTTTTTTTTTTTT=1.0000	TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	106	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
East Asian	Sub	82	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	24	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	102	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Latin American 2	Sub	514	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	76	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	332	TTTTTTTTTTTTTTTTTTTT=0.997	TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.003, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000	0.993976	0.0	0.006024	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	12570	(T)₂₀=0.96237	del(T)₁₃=0.00000, del(T)₁₂=0.00000, del(T)₁₀=0.00000, del(T)₉=0.00000, del(T)₅=0.00000, delTTT=0.00000, delTT=0.00000, delT=0.03652, dupT=0.00111, dupTT=0.00000, dupTTT=0.00000
Allele Frequency Aggregator	European	Sub	9446	(T)₂₀=0.9500	del(T)₁₃=0.0000, del(T)₁₂=0.0000, del(T)₁₀=0.0000, del(T)₉=0.0000, del(T)₅=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0485, dupT=0.0015, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	African	Sub	1994	(T)₂₀=1.0000	del(T)₁₃=0.0000, del(T)₁₂=0.0000, del(T)₁₀=0.0000, del(T)₉=0.0000, del(T)₅=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	514	(T)₂₀=1.000	del(T)₁₃=0.000, del(T)₁₂=0.000, del(T)₁₀=0.000, del(T)₉=0.000, del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Other	Sub	332	(T)₂₀=0.997	del(T)₁₃=0.000, del(T)₁₂=0.000, del(T)₁₀=0.000, del(T)₉=0.000, del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.003, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Asian	Sub	106	(T)₂₀=1.000	del(T)₁₃=0.000, del(T)₁₂=0.000, del(T)₁₀=0.000, del(T)₉=0.000, del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Latin American 1	Sub	102	(T)₂₀=1.000	del(T)₁₃=0.000, del(T)₁₂=0.000, del(T)₁₀=0.000, del(T)₉=0.000, del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	South Asian	Sub	76	(T)₂₀=1.00	del(T)₁₃=0.00, del(T)₁₂=0.00, del(T)₁₀=0.00, del(T)₉=0.00, del(T)₅=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Northern Sweden	ACPOP	Study-wide	600	(T)₂₀=0.905	delT=0.095

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 20	NC_000020.11:g.58317564_58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317565_58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317567_58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317568_58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317570_58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317572_58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317573_58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317574_58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317575_58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317576del
GRCh38.p14 chr 20	NC_000020.11:g.58317576dup
GRCh38.p14 chr 20	NC_000020.11:g.58317575_58317576dup
GRCh38.p14 chr 20	NC_000020.11:g.58317574_58317576dup
GRCh38.p14 chr 20	NC_000020.11:g.58317573_58317576dup
GRCh38.p14 chr 20	NC_000020.11:g.58317572_58317576dup
GRCh38.p14 chr 20	NC_000020.11:g.58317571_58317576dup
GRCh37.p13 chr 20	NC_000020.10:g.56892620_56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892621_56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892623_56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892624_56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892626_56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892628_56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892629_56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892630_56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892631_56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892632del
GRCh37.p13 chr 20	NC_000020.10:g.56892632dup
GRCh37.p13 chr 20	NC_000020.10:g.56892631_56892632dup
GRCh37.p13 chr 20	NC_000020.10:g.56892630_56892632dup
GRCh37.p13 chr 20	NC_000020.10:g.56892629_56892632dup
GRCh37.p13 chr 20	NC_000020.10:g.56892628_56892632dup
GRCh37.p13 chr 20	NC_000020.10:g.56892627_56892632dup

Gene: RAB22A, RAB22A, member RAS oncogene family (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
RAB22A transcript	NM_020673.3:c.116+6442_11… NM_020673.3:c.116+6442_116+6454del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₂₀=	del(T)₁₃	del(T)₁₂	del(T)₁₀	del(T)₉	del(T)₇	del(T)₅	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₅	dup(T)₆
GRCh38.p14 chr 20	NC_000020.11:g.58317557_58317576=	NC_000020.11:g.58317564_58317576del	NC_000020.11:g.58317565_58317576del	NC_000020.11:g.58317567_58317576del	NC_000020.11:g.58317568_58317576del	NC_000020.11:g.58317570_58317576del	NC_000020.11:g.58317572_58317576del	NC_000020.11:g.58317573_58317576del	NC_000020.11:g.58317574_58317576del	NC_000020.11:g.58317575_58317576del	NC_000020.11:g.58317576del	NC_000020.11:g.58317576dup	NC_000020.11:g.58317575_58317576dup	NC_000020.11:g.58317574_58317576dup	NC_000020.11:g.58317573_58317576dup	NC_000020.11:g.58317572_58317576dup	NC_000020.11:g.58317571_58317576dup
GRCh37.p13 chr 20	NC_000020.10:g.56892613_56892632=	NC_000020.10:g.56892620_56892632del	NC_000020.10:g.56892621_56892632del	NC_000020.10:g.56892623_56892632del	NC_000020.10:g.56892624_56892632del	NC_000020.10:g.56892626_56892632del	NC_000020.10:g.56892628_56892632del	NC_000020.10:g.56892629_56892632del	NC_000020.10:g.56892630_56892632del	NC_000020.10:g.56892631_56892632del	NC_000020.10:g.56892632del	NC_000020.10:g.56892632dup	NC_000020.10:g.56892631_56892632dup	NC_000020.10:g.56892630_56892632dup	NC_000020.10:g.56892629_56892632dup	NC_000020.10:g.56892628_56892632dup	NC_000020.10:g.56892627_56892632dup
RAB22A transcript	NM_020673.2:c.116+6435=	NM_020673.2:c.116+6442_116+6454del	NM_020673.2:c.116+6443_116+6454del	NM_020673.2:c.116+6445_116+6454del	NM_020673.2:c.116+6446_116+6454del	NM_020673.2:c.116+6448_116+6454del	NM_020673.2:c.116+6450_116+6454del	NM_020673.2:c.116+6451_116+6454del	NM_020673.2:c.116+6452_116+6454del	NM_020673.2:c.116+6453_116+6454del	NM_020673.2:c.116+6454del	NM_020673.2:c.116+6454dup	NM_020673.2:c.116+6453_116+6454dup	NM_020673.2:c.116+6452_116+6454dup	NM_020673.2:c.116+6451_116+6454dup	NM_020673.2:c.116+6450_116+6454dup	NM_020673.2:c.116+6449_116+6454dup
RAB22A transcript	NM_020673.3:c.116+6435=	NM_020673.3:c.116+6442_116+6454del	NM_020673.3:c.116+6443_116+6454del	NM_020673.3:c.116+6445_116+6454del	NM_020673.3:c.116+6446_116+6454del	NM_020673.3:c.116+6448_116+6454del	NM_020673.3:c.116+6450_116+6454del	NM_020673.3:c.116+6451_116+6454del	NM_020673.3:c.116+6452_116+6454del	NM_020673.3:c.116+6453_116+6454del	NM_020673.3:c.116+6454del	NM_020673.3:c.116+6454dup	NM_020673.3:c.116+6453_116+6454dup	NM_020673.3:c.116+6452_116+6454dup	NM_020673.3:c.116+6451_116+6454dup	NM_020673.3:c.116+6450_116+6454dup	NM_020673.3:c.116+6449_116+6454dup
RAB22A transcript variant X1	XM_005260469.1:c.116+6435=	XM_005260469.1:c.116+6442_116+6454del	XM_005260469.1:c.116+6443_116+6454del	XM_005260469.1:c.116+6445_116+6454del	XM_005260469.1:c.116+6446_116+6454del	XM_005260469.1:c.116+6448_116+6454del	XM_005260469.1:c.116+6450_116+6454del	XM_005260469.1:c.116+6451_116+6454del	XM_005260469.1:c.116+6452_116+6454del	XM_005260469.1:c.116+6453_116+6454del	XM_005260469.1:c.116+6454del	XM_005260469.1:c.116+6454dup	XM_005260469.1:c.116+6453_116+6454dup	XM_005260469.1:c.116+6452_116+6454dup	XM_005260469.1:c.116+6451_116+6454dup	XM_005260469.1:c.116+6450_116+6454dup	XM_005260469.1:c.116+6449_116+6454dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

37 SubSNP, 25 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss41397633	Mar 15, 2006 (126)
2	SWEGEN	ss3018405270	Jan 10, 2018 (151)
3	ACPOP	ss3743513713	Jul 13, 2019 (153)
4	EVA	ss3835742976	Apr 27, 2020 (154)
5	GNOMAD	ss4355755823	Apr 26, 2021 (155)
6	GNOMAD	ss4355755824	Apr 26, 2021 (155)
7	GNOMAD	ss4355755825	Apr 26, 2021 (155)
8	GNOMAD	ss4355755826	Apr 26, 2021 (155)
9	GNOMAD	ss4355755827	Apr 26, 2021 (155)
10	GNOMAD	ss4355755828	Apr 26, 2021 (155)
11	GNOMAD	ss4355755829	Apr 26, 2021 (155)
12	GNOMAD	ss4355755830	Apr 26, 2021 (155)
13	GNOMAD	ss4355755831	Apr 26, 2021 (155)
14	GNOMAD	ss4355755832	Apr 26, 2021 (155)
15	GNOMAD	ss4355755833	Apr 26, 2021 (155)
16	GNOMAD	ss4355755834	Apr 26, 2021 (155)
17	GNOMAD	ss4355755835	Apr 26, 2021 (155)
18	TOPMED	ss5093294218	Apr 26, 2021 (155)
19	TOPMED	ss5093294219	Apr 26, 2021 (155)
20	TOPMED	ss5093294220	Apr 26, 2021 (155)
21	TOPMED	ss5093294221	Apr 26, 2021 (155)
22	TOPMED	ss5093294222	Apr 26, 2021 (155)
23	TOMMO_GENOMICS	ss5230273278	Apr 26, 2021 (155)
24	TOMMO_GENOMICS	ss5230273279	Apr 26, 2021 (155)
25	1000G_HIGH_COVERAGE	ss5309285122	Oct 13, 2022 (156)
26	1000G_HIGH_COVERAGE	ss5309285123	Oct 13, 2022 (156)
27	1000G_HIGH_COVERAGE	ss5309285124	Oct 13, 2022 (156)
28	HUGCELL_USP	ss5501518330	Oct 13, 2022 (156)
29	HUGCELL_USP	ss5501518331	Oct 13, 2022 (156)
30	HUGCELL_USP	ss5501518332	Oct 13, 2022 (156)
31	HUGCELL_USP	ss5501518333	Oct 13, 2022 (156)
32	HUGCELL_USP	ss5501518334	Oct 13, 2022 (156)
33	TOMMO_GENOMICS	ss5790268610	Oct 13, 2022 (156)
34	TOMMO_GENOMICS	ss5790268611	Oct 13, 2022 (156)
35	TOMMO_GENOMICS	ss5790268612	Oct 13, 2022 (156)
36	EVA	ss5845883158	Oct 13, 2022 (156)
37	EVA	ss5845883159	Oct 13, 2022 (156)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
48	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 555773607 (NC_000020.11:58317556::T 596/114926) Row 555773608 (NC_000020.11:58317556::TT 127/114922) Row 555773609 (NC_000020.11:58317556::TTT 14/114934)...	-	Apr 26, 2021 (155)
51	Northern Sweden	NC_000020.10 - 56892613	Jul 13, 2019 (153)
52	8.3KJPN Submission ignored due to conflicting rows: Row 88242585 (NC_000020.10:56892612::T 286/16740) Row 88242586 (NC_000020.10:56892612:T: 15/16740)	-	Apr 26, 2021 (155)
53	8.3KJPN Submission ignored due to conflicting rows: Row 88242585 (NC_000020.10:56892612::T 286/16740) Row 88242586 (NC_000020.10:56892612:T: 15/16740)	-	Apr 26, 2021 (155)
54	14KJPN Submission ignored due to conflicting rows: Row 124105714 (NC_000020.11:58317556::T 508/28252) Row 124105715 (NC_000020.11:58317556:T: 24/28252) Row 124105716 (NC_000020.11:58317556::TT 2/28252)	-	Oct 13, 2022 (156)
55	14KJPN Submission ignored due to conflicting rows: Row 124105714 (NC_000020.11:58317556::T 508/28252) Row 124105715 (NC_000020.11:58317556:T: 24/28252) Row 124105716 (NC_000020.11:58317556::TT 2/28252)	-	Oct 13, 2022 (156)
56	14KJPN Submission ignored due to conflicting rows: Row 124105714 (NC_000020.11:58317556::T 508/28252) Row 124105715 (NC_000020.11:58317556:T: 24/28252) Row 124105716 (NC_000020.11:58317556::TT 2/28252)	-	Oct 13, 2022 (156)
57	TopMed Submission ignored due to conflicting rows: Row 368403163 (NC_000020.11:58317556:TTTTT: 2/264690) Row 368403164 (NC_000020.11:58317556:TTTTTTTTT: 1/264690) Row 368403165 (NC_000020.11:58317556:TTTTTTTTTT: 1/264690)...	-	Apr 26, 2021 (155)
58	TopMed Submission ignored due to conflicting rows: Row 368403163 (NC_000020.11:58317556:TTTTT: 2/264690) Row 368403164 (NC_000020.11:58317556:TTTTTTTTT: 1/264690) Row 368403165 (NC_000020.11:58317556:TTTTTTTTTT: 1/264690)...	-	Apr 26, 2021 (155)
59	TopMed Submission ignored due to conflicting rows: Row 368403163 (NC_000020.11:58317556:TTTTT: 2/264690) Row 368403164 (NC_000020.11:58317556:TTTTTTTTT: 1/264690) Row 368403165 (NC_000020.11:58317556:TTTTTTTTTT: 1/264690)...	-	Apr 26, 2021 (155)
60	TopMed Submission ignored due to conflicting rows: Row 368403163 (NC_000020.11:58317556:TTTTT: 2/264690) Row 368403164 (NC_000020.11:58317556:TTTTTTTTT: 1/264690) Row 368403165 (NC_000020.11:58317556:TTTTTTTTTT: 1/264690)...	-	Apr 26, 2021 (155)
61	TopMed Submission ignored due to conflicting rows: Row 368403163 (NC_000020.11:58317556:TTTTT: 2/264690) Row 368403164 (NC_000020.11:58317556:TTTTTTTTT: 1/264690) Row 368403165 (NC_000020.11:58317556:TTTTTTTTTT: 1/264690)...	-	Apr 26, 2021 (155)
62	ALFA	NC_000020.11 - 58317557	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5093294222	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTT	(self)
ss4355755835, ss5093294221, ss5501518334	NC_000020.11:58317556:TTTTTTTTTTTT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT	(self)
ss5093294220	NC_000020.11:58317556:TTTTTTTTTT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT	(self)
ss5093294219	NC_000020.11:58317556:TTTTTTTTT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss4355755834	NC_000020.11:58317556:TTTTTTT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4355755833, ss5093294218	NC_000020.11:58317556:TTTTT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4355755832	NC_000020.11:58317556:TTTT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss4355755831, ss5501518333	NC_000020.11:58317556:TTT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3018405270, ss5845883158	NC_000020.10:56892612:TT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4355755830, ss5501518332	NC_000020.11:58317556:TT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
16798578, ss3743513713, ss3835742976, ss5230273279	NC_000020.10:56892612:T:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4355755829, ss5309285122, ss5501518330, ss5790268611	NC_000020.11:58317556:T:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss41397633	NT_011362.10:27088723:T:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss5230273278	NC_000020.10:56892612::T	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss4355755823, ss5309285123, ss5501518331, ss5790268610	NC_000020.11:58317556::T	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss4355755824, ss5309285124, ss5790268612	NC_000020.11:58317556::TT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss5845883159	NC_000020.10:56892612::TTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT
ss4355755825	NC_000020.11:58317556::TTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
10570246190	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4355755826	NC_000020.11:58317556::TTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4355755827	NC_000020.11:58317556::TTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4355755828	NC_000020.11:58317556::TTTTTT	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss2410427169	NC_000020.10:56892612:TTTTTTTTTTTT:	NC_000020.11:58317556:TTTTTTTTTTTT… NC_000020.11:58317556:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs35819954

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs35819954