Name: rs35526382
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs35526382

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr4:87826225-87826237 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTTT / delTT / delT / dupT / dup…
delTTT / delTT / delT / dupT / dupTT / dupTTT
Variation Type: Indel Insertion and Deletion
Frequency: dupT=0.0767 (632/8238, ALFA)
delT=0.3558 (1558/4379, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: MEPE : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	8238	TTTTTTTTTTTTT=0.8564	TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0669, TTTTTTTTTTTTTT=0.0767, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000	0.862222	0.018333	0.119444	32
European	Sub	7148	TTTTTTTTTTTTT=0.8348	TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0768, TTTTTTTTTTTTTT=0.0884, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000	0.837749	0.02159	0.140661	32
African	Sub	520	TTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	22	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	498	TTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	56	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	38	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	18	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	40	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	284	TTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	30	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	160	TTTTTTTTTTTTT=0.988	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.013, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	8238	(T)₁₃=0.8564	delTT=0.0000, delT=0.0669, dupT=0.0767, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	European	Sub	7148	(T)₁₃=0.8348	delTT=0.0000, delT=0.0768, dupT=0.0884, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	African	Sub	520	(T)₁₃=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Latin American 2	Sub	284	(T)₁₃=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Other	Sub	160	(T)₁₃=0.988	delTT=0.000, delT=0.013, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Asian	Sub	56	(T)₁₃=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	40	(T)₁₃=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	South Asian	Sub	30	(T)₁₃=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
1000Genomes	Global	Study-wide	4379	(T)₁₃=0.6442	delT=0.3558
1000Genomes	African	Sub	1154	(T)₁₃=0.4801	delT=0.5199
1000Genomes	East Asian	Sub	976	(T)₁₃=0.633	delT=0.367
1000Genomes	South Asian	Sub	856	(T)₁₃=0.723	delT=0.277
1000Genomes	Europe	Sub	786	(T)₁₃=0.754	delT=0.246
1000Genomes	American	Sub	607	(T)₁₃=0.720	delT=0.280

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 4	NC_000004.12:g.87826235_87826237del
GRCh38.p14 chr 4	NC_000004.12:g.87826236_87826237del
GRCh38.p14 chr 4	NC_000004.12:g.87826237del
GRCh38.p14 chr 4	NC_000004.12:g.87826237dup
GRCh38.p14 chr 4	NC_000004.12:g.87826236_87826237dup
GRCh38.p14 chr 4	NC_000004.12:g.87826235_87826237dup
GRCh37.p13 chr 4	NC_000004.11:g.88747387_88747389del
GRCh37.p13 chr 4	NC_000004.11:g.88747388_88747389del
GRCh37.p13 chr 4	NC_000004.11:g.88747389del
GRCh37.p13 chr 4	NC_000004.11:g.88747389dup
GRCh37.p13 chr 4	NC_000004.11:g.88747388_88747389dup
GRCh37.p13 chr 4	NC_000004.11:g.88747387_88747389dup
MEPE RefSeqGene	NG_034073.1:g.9838_9840del
MEPE RefSeqGene	NG_034073.1:g.9839_9840del
MEPE RefSeqGene	NG_034073.1:g.9840del
MEPE RefSeqGene	NG_034073.1:g.9840dup
MEPE RefSeqGene	NG_034073.1:g.9839_9840dup
MEPE RefSeqGene	NG_034073.1:g.9838_9840dup

Gene: MEPE, matrix extracellular phosphoglycoprotein (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
MEPE transcript variant 1	NM_001184694.3:c.-13+4764… NM_001184694.3:c.-13+4764_-13+4766del	N/A	Intron Variant
MEPE transcript variant 3	NM_001184695.4:c.	N/A	Genic Upstream Transcript Variant
MEPE transcript variant 4	NM_001184696.2:c.	N/A	Genic Upstream Transcript Variant
MEPE transcript variant 5	NM_001184697.2:c.	N/A	Genic Upstream Transcript Variant
MEPE transcript variant 6	NM_001291183.2:c.	N/A	Genic Upstream Transcript Variant
MEPE transcript variant 2	NM_020203.6:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₃=	delTTT	delTT	delT	dupT	dupTT	dupTTT
GRCh38.p14 chr 4	NC_000004.12:g.87826225_87826237=	NC_000004.12:g.87826235_87826237del	NC_000004.12:g.87826236_87826237del	NC_000004.12:g.87826237del	NC_000004.12:g.87826237dup	NC_000004.12:g.87826236_87826237dup	NC_000004.12:g.87826235_87826237dup
GRCh37.p13 chr 4	NC_000004.11:g.88747377_88747389=	NC_000004.11:g.88747387_88747389del	NC_000004.11:g.88747388_88747389del	NC_000004.11:g.88747389del	NC_000004.11:g.88747389dup	NC_000004.11:g.88747388_88747389dup	NC_000004.11:g.88747387_88747389dup
MEPE RefSeqGene	NG_034073.1:g.9828_9840=	NG_034073.1:g.9838_9840del	NG_034073.1:g.9839_9840del	NG_034073.1:g.9840del	NG_034073.1:g.9840dup	NG_034073.1:g.9839_9840dup	NG_034073.1:g.9838_9840dup
MEPE transcript variant 1	NM_001184694.1:c.-13+4754=	NM_001184694.1:c.-13+4764_-13+4766del	NM_001184694.1:c.-13+4765_-13+4766del	NM_001184694.1:c.-13+4766del	NM_001184694.1:c.-13+4766dup	NM_001184694.1:c.-13+4765_-13+4766dup	NM_001184694.1:c.-13+4764_-13+4766dup
MEPE transcript variant 1	NM_001184694.3:c.-13+4754=	NM_001184694.3:c.-13+4764_-13+4766del	NM_001184694.3:c.-13+4765_-13+4766del	NM_001184694.3:c.-13+4766del	NM_001184694.3:c.-13+4766dup	NM_001184694.3:c.-13+4765_-13+4766dup	NM_001184694.3:c.-13+4764_-13+4766dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

58 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42312123	Mar 15, 2006 (126)
2	HGSV	ss83231307	Sep 08, 2015 (146)
3	HUMANGENOME_JCVI	ss95361780	Feb 13, 2009 (138)
4	HUMANGENOME_JCVI	ss98913503	Feb 06, 2009 (130)
5	GMI	ss288552919	May 04, 2012 (137)
6	GMI	ss288552920	May 04, 2012 (138)
7	PJP	ss295176317	May 09, 2011 (138)
8	SSMP	ss663536323	Apr 01, 2015 (144)
9	BILGI_BIOE	ss666267909	Apr 25, 2013 (138)
10	1000GENOMES	ss1372440936	Aug 21, 2014 (142)
11	1000GENOMES	ss1372440937	Aug 21, 2014 (142)
12	EVA_UK10K_ALSPAC	ss1704247693	Apr 01, 2015 (144)
13	EVA_UK10K_TWINSUK	ss1704248281	Apr 01, 2015 (144)
14	EVA_UK10K_TWINSUK	ss1710157312	Apr 01, 2015 (144)
15	EVA_UK10K_ALSPAC	ss1710157315	Apr 01, 2015 (144)
16	MCHAISSO	ss3064111868	Nov 08, 2017 (151)
17	MCHAISSO	ss3064979236	Nov 08, 2017 (151)
18	URBANLAB	ss3647785257	Oct 12, 2018 (152)
19	EVA_DECODE	ss3712499941	Jul 13, 2019 (153)
20	EVA_DECODE	ss3712499942	Jul 13, 2019 (153)
21	EVA_DECODE	ss3712499943	Jul 13, 2019 (153)
22	EVA_DECODE	ss3712499944	Jul 13, 2019 (153)
23	ACPOP	ss3731351645	Jul 13, 2019 (153)
24	ACPOP	ss3731351646	Jul 13, 2019 (153)
25	PACBIO	ss3784782150	Jul 13, 2019 (153)
26	PACBIO	ss3790230208	Jul 13, 2019 (153)
27	PACBIO	ss3795105588	Jul 13, 2019 (153)
28	KHV_HUMAN_GENOMES	ss3805220280	Jul 13, 2019 (153)
29	KHV_HUMAN_GENOMES	ss3805220281	Jul 13, 2019 (153)
30	EVA	ss3828662748	Apr 26, 2020 (154)
31	EVA	ss3837773061	Apr 26, 2020 (154)
32	EVA	ss3843211013	Apr 26, 2020 (154)
33	KOGIC	ss3954599505	Apr 26, 2020 (154)
34	KOGIC	ss3954599506	Apr 26, 2020 (154)
35	KOGIC	ss3954599507	Apr 26, 2020 (154)
36	GNOMAD	ss4115303745	Apr 26, 2021 (155)
37	GNOMAD	ss4115303746	Apr 26, 2021 (155)
38	GNOMAD	ss4115303747	Apr 26, 2021 (155)
39	GNOMAD	ss4115303748	Apr 26, 2021 (155)
40	GNOMAD	ss4115303749	Apr 26, 2021 (155)
41	GNOMAD	ss4115303750	Apr 26, 2021 (155)
42	TOMMO_GENOMICS	ss5166728776	Apr 26, 2021 (155)
43	TOMMO_GENOMICS	ss5166728777	Apr 26, 2021 (155)
44	TOMMO_GENOMICS	ss5166728778	Apr 26, 2021 (155)
45	1000G_HIGH_COVERAGE	ss5260006728	Oct 13, 2022 (156)
46	1000G_HIGH_COVERAGE	ss5260006729	Oct 13, 2022 (156)
47	1000G_HIGH_COVERAGE	ss5260006730	Oct 13, 2022 (156)
48	1000G_HIGH_COVERAGE	ss5260006731	Oct 13, 2022 (156)
49	HUGCELL_USP	ss5458679319	Oct 13, 2022 (156)
50	HUGCELL_USP	ss5458679320	Oct 13, 2022 (156)
51	HUGCELL_USP	ss5458679321	Oct 13, 2022 (156)
52	TOMMO_GENOMICS	ss5701360470	Oct 13, 2022 (156)
53	TOMMO_GENOMICS	ss5701360471	Oct 13, 2022 (156)
54	TOMMO_GENOMICS	ss5701360472	Oct 13, 2022 (156)
55	EVA	ss5844311471	Oct 13, 2022 (156)
56	EVA	ss5844311472	Oct 13, 2022 (156)
57	EVA	ss5854322490	Oct 13, 2022 (156)
58	EVA	ss5864358282	Oct 13, 2022 (156)
59	1000Genomes	NC_000004.11 - 88747377	Oct 12, 2018 (152)
60	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 12285716 (NC_000004.11:88747376:T: 678/3854) Row 12285717 (NC_000004.11:88747376::T 891/3854)	-	Oct 12, 2018 (152)
61	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 12285716 (NC_000004.11:88747376:T: 678/3854) Row 12285717 (NC_000004.11:88747376::T 891/3854)	-	Oct 12, 2018 (152)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 156456592 (NC_000004.12:87826224::T 23725/132618) Row 156456593 (NC_000004.12:87826224::TT 411/132684) Row 156456594 (NC_000004.12:87826224::TTT 1/132692)...	-	Apr 26, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 156456592 (NC_000004.12:87826224::T 23725/132618) Row 156456593 (NC_000004.12:87826224::TT 411/132684) Row 156456594 (NC_000004.12:87826224::TTT 1/132692)...	-	Apr 26, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 156456592 (NC_000004.12:87826224::T 23725/132618) Row 156456593 (NC_000004.12:87826224::TT 411/132684) Row 156456594 (NC_000004.12:87826224::TTT 1/132692)...	-	Apr 26, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 156456592 (NC_000004.12:87826224::T 23725/132618) Row 156456593 (NC_000004.12:87826224::TT 411/132684) Row 156456594 (NC_000004.12:87826224::TTT 1/132692)...	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 156456592 (NC_000004.12:87826224::T 23725/132618) Row 156456593 (NC_000004.12:87826224::TT 411/132684) Row 156456594 (NC_000004.12:87826224::TTT 1/132692)...	-	Apr 26, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 156456592 (NC_000004.12:87826224::T 23725/132618) Row 156456593 (NC_000004.12:87826224::TT 411/132684) Row 156456594 (NC_000004.12:87826224::TTT 1/132692)...	-	Apr 26, 2021 (155)
68	Korean Genome Project Submission ignored due to conflicting rows: Row 10977506 (NC_000004.12:87826225:T: 691/1832) Row 10977507 (NC_000004.12:87826226::T 74/1832) Row 10977508 (NC_000004.12:87826224:TT: 9/1832)	-	Apr 26, 2020 (154)
69	Korean Genome Project Submission ignored due to conflicting rows: Row 10977506 (NC_000004.12:87826225:T: 691/1832) Row 10977507 (NC_000004.12:87826226::T 74/1832) Row 10977508 (NC_000004.12:87826224:TT: 9/1832)	-	Apr 26, 2020 (154)
70	Korean Genome Project Submission ignored due to conflicting rows: Row 10977506 (NC_000004.12:87826225:T: 691/1832) Row 10977507 (NC_000004.12:87826226::T 74/1832) Row 10977508 (NC_000004.12:87826224:TT: 9/1832)	-	Apr 26, 2020 (154)
71	Northern Sweden Submission ignored due to conflicting rows: Row 4636510 (NC_000004.11:88747376:T: 105/600) Row 4636511 (NC_000004.11:88747376::T 63/600)	-	Jul 13, 2019 (153)
72	Northern Sweden Submission ignored due to conflicting rows: Row 4636510 (NC_000004.11:88747376:T: 105/600) Row 4636511 (NC_000004.11:88747376::T 63/600)	-	Jul 13, 2019 (153)
73	8.3KJPN Submission ignored due to conflicting rows: Row 24698083 (NC_000004.11:88747376:T: 5921/16758) Row 24698084 (NC_000004.11:88747376::T 259/16758) Row 24698085 (NC_000004.11:88747376:TT: 3/16758)	-	Apr 26, 2021 (155)
74	8.3KJPN Submission ignored due to conflicting rows: Row 24698083 (NC_000004.11:88747376:T: 5921/16758) Row 24698084 (NC_000004.11:88747376::T 259/16758) Row 24698085 (NC_000004.11:88747376:TT: 3/16758)	-	Apr 26, 2021 (155)
75	8.3KJPN Submission ignored due to conflicting rows: Row 24698083 (NC_000004.11:88747376:T: 5921/16758) Row 24698084 (NC_000004.11:88747376::T 259/16758) Row 24698085 (NC_000004.11:88747376:TT: 3/16758)	-	Apr 26, 2021 (155)
76	14KJPN Submission ignored due to conflicting rows: Row 35197574 (NC_000004.12:87826224:T: 9826/28254) Row 35197575 (NC_000004.12:87826224::T 412/28254) Row 35197576 (NC_000004.12:87826224:TT: 2/28254)	-	Oct 13, 2022 (156)
77	14KJPN Submission ignored due to conflicting rows: Row 35197574 (NC_000004.12:87826224:T: 9826/28254) Row 35197575 (NC_000004.12:87826224::T 412/28254) Row 35197576 (NC_000004.12:87826224:TT: 2/28254)	-	Oct 13, 2022 (156)
78	14KJPN Submission ignored due to conflicting rows: Row 35197574 (NC_000004.12:87826224:T: 9826/28254) Row 35197575 (NC_000004.12:87826224::T 412/28254) Row 35197576 (NC_000004.12:87826224:TT: 2/28254)	-	Oct 13, 2022 (156)
79	UK 10K study - Twins Submission ignored due to conflicting rows: Row 12285716 (NC_000004.11:88747376:T: 652/3708) Row 12285717 (NC_000004.11:88747376::T 850/3708)	-	Oct 12, 2018 (152)
80	UK 10K study - Twins Submission ignored due to conflicting rows: Row 12285716 (NC_000004.11:88747376:T: 652/3708) Row 12285717 (NC_000004.11:88747376::T 850/3708)	-	Oct 12, 2018 (152)
81	ALFA	NC_000004.12 - 87826225	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs201982764	May 11, 2012 (137)
rs374799606	May 13, 2013 (138)
rs70957279	May 15, 2013 (138)
rs140105650	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4115303750	NC_000004.12:87826224:TTT:	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTT	(self)
ss5166728778	NC_000004.11:88747376:TT:	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss3712499941, ss3954599507, ss4115303749, ss5260006731, ss5701360472	NC_000004.12:87826224:TT:	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTT	(self)
5244396552	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTT	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss83231307	NC_000004.9:89104567:T:	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss288552919	NC_000004.10:88966400:T:	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
22088575, ss663536323, ss1372440936, ss1704247693, ss1704248281, ss3731351645, ss3828662748, ss5166728776, ss5844311471	NC_000004.11:88747376:T:	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3064111868, ss3064979236, ss3805220281, ss4115303748, ss5260006728, ss5458679319, ss5701360470, ss5854322490, ss5864358282	NC_000004.12:87826224:T:	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
5244396552	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3712499942, ss3954599505	NC_000004.12:87826225:T:	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss295176317	NC_000004.10:88966407::T	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss288552920	NC_000004.10:88966413::T	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss666267909, ss3731351646, ss3784782150, ss3790230208, ss3795105588, ss5166728777, ss5844311472	NC_000004.11:88747376::T	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss1372440937, ss1710157312, ss1710157315, ss3837773061	NC_000004.11:88747377::T	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3647785257, ss4115303745, ss5260006729, ss5458679320, ss5701360471	NC_000004.12:87826224::T	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
5244396552	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3805220280, ss3843211013	NC_000004.12:87826225::T	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3712499943, ss3954599506	NC_000004.12:87826226::T	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss42312123, ss98913503	NT_016354.19:13295097::T	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss95361780	NT_016354.19:13295110::T	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4115303746, ss5260006730, ss5458679321	NC_000004.12:87826224::TT	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
5244396552	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3712499944	NC_000004.12:87826226::TT	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4115303747	NC_000004.12:87826224::TTT	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
5244396552	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000004.12:87826224:TTTTTTTTTTTT… NC_000004.12:87826224:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs35526382

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs35526382